RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 FGF14Q92915 247 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 NXPE3Q969Y0 559 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 ZMAT2Q96NC0 199 aaKnown RBP20.37■□□□□ 0.85
PRKCB-209ENST00000498058 HCFC1R1Q9NWW0 138 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 RIF1Q5UIP0 2472 aaKnown RBP20.36■□□□□ 0.85
PRKCB-209ENST00000498058 CITO14578 2027 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 CCDC169A6NNP5 214 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 B3GAT3O94766 335 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 GRM5P41594 1212 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 OSTNP61366 133 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 ELAVL2Q12926 359 aaKnown RBP20.36■□□□□ 0.85
PRKCB-209ENST00000498058 PPM1LQ5SGD2 360 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 RINT1Q6NUQ1 792 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 DCLRE1AQ6PJP8 1040 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 PARM1Q6UWI2 310 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 C1orf186Q6ZWK4 172 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 TMEM130Q8N3G9 435 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 ITFG1Q8TB96 612 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 SLC7A14Q8TBB6 771 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 DDX27Q96GQ7 796 aaKnown RBP20.36■□□□□ 0.85
PRKCB-209ENST00000498058 RTP3Q9BQQ7 232 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 TARS2Q9BW92 718 aaKnown RBP20.36■□□□□ 0.85
PRKCB-209ENST00000498058 TBC1D17Q9HA65 648 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.36■□□□□ 0.85
PRKCB-209ENST00000498058 ARHGAP28Q9P2N2 729 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 MTRRQ9UBK8 725 aa20.36■□□□□ 0.85
PRKCB-209ENST00000498058 PHLPP2Q6ZVD8 1323 aa20.35■□□□□ 0.85
PRKCB-209ENST00000498058 FAM186AA6NE01 2351 aa20.35■□□□□ 0.85
PRKCB-209ENST00000498058 SFI1A8K8P3 1242 aa20.35■□□□□ 0.85
PRKCB-209ENST00000498058 HNRNPA1P09651 372 aaKnown RBP eCLIP20.35■□□□□ 0.857e-7■□□□□ 10
PRKCB-209ENST00000498058 ANGPT1Q15389 498 aa20.35■□□□□ 0.85
PRKCB-209ENST00000498058 AXDND1Q5T1B0 1012 aaPredicted RBP20.35■□□□□ 0.85
PRKCB-209ENST00000498058 ZBTB45Q96K62 511 aaPredicted RBP20.35■□□□□ 0.85
PRKCB-209ENST00000498058 PNMA5Q96PV4 448 aa20.35■□□□□ 0.85
PRKCB-209ENST00000498058 TMEM134Q9H6X4 195 aa20.35■□□□□ 0.85
PRKCB-209ENST00000498058 DNMT3BQ9UBC3 853 aaKnown RBP20.35■□□□□ 0.85
PRKCB-209ENST00000498058 CDH7Q9ULB5 785 aa20.35■□□□□ 0.85
PRKCB-209ENST00000498058 CDY1Q9Y6F8 540 aa20.35■□□□□ 0.85
PRKCB-209ENST00000498058 PDCD11Q14690 1871 aaKnown RBP20.35■□□□□ 0.85
PRKCB-209ENST00000498058 MYH11P35749 1972 aa20.34■□□□□ 0.85
PRKCB-209ENST00000498058 PROZP22891 400 aa20.34■□□□□ 0.85
PRKCB-209ENST00000498058 HOXA9P31269 272 aa20.34■□□□□ 0.85
PRKCB-209ENST00000498058 LIN9Q5TKA1 542 aa20.34■□□□□ 0.85
PRKCB-209ENST00000498058 FGF13Q92913 245 aa20.34■□□□□ 0.85
PRKCB-209ENST00000498058 SLC2A4RGQ9NR83 387 aa20.34■□□□□ 0.85
PRKCB-209ENST00000498058 DLGAP2Q9P1A6 1054 aa20.34■□□□□ 0.85
PRKCB-209ENST00000498058 POLIQ9UNA4 740 aa20.34■□□□□ 0.85
PRKCB-209ENST00000498058 DNM3Q9UQ16 869 aa20.34■□□□□ 0.85
PRKCB-209ENST00000498058 STK25O00506 426 aa20.33■□□□□ 0.85
PRKCB-209ENST00000498058 SLC16A4O15374 487 aa20.33■□□□□ 0.85
PRKCB-209ENST00000498058 ANP32AP39687 249 aaKnown RBP20.33■□□□□ 0.85
PRKCB-209ENST00000498058 GPC5P78333 572 aa20.33■□□□□ 0.85
PRKCB-209ENST00000498058 ZNF568Q3ZCX4 644 aa20.33■□□□□ 0.85
PRKCB-209ENST00000498058 HSCBQ8IWL3 235 aa20.33■□□□□ 0.85
PRKCB-209ENST00000498058 SNX21Q969T3 373 aa20.33■□□□□ 0.85
PRKCB-209ENST00000498058 SNX27Q96L92 541 aa20.33■□□□□ 0.85
PRKCB-209ENST00000498058 KMT5AQ9NQR1 393 aa20.33■□□□□ 0.85
PRKCB-209ENST00000498058 BACE2Q9Y5Z0 518 aa20.33■□□□□ 0.85
PRKCB-209ENST00000498058 LRRN2O75325 713 aa20.32■□□□□ 0.84
PRKCB-209ENST00000498058 DCNP07585 359 aaKnown RBP20.32■□□□□ 0.84
PRKCB-209ENST00000498058 GLULP15104 373 aa20.32■□□□□ 0.84
PRKCB-209ENST00000498058 PRPHP41219 470 aa20.32■□□□□ 0.84
PRKCB-209ENST00000498058 RAD51AP2Q09MP3 1159 aa20.32■□□□□ 0.84
PRKCB-209ENST00000498058 SEZ6Q53EL9 994 aa20.32■□□□□ 0.84
PRKCB-209ENST00000498058 KRT79Q5XKE5 535 aa20.32■□□□□ 0.84
PRKCB-209ENST00000498058 PDXDC1Q6P996 788 aa20.32■□□□□ 0.84
PRKCB-209ENST00000498058 C18orf25Q96B23 403 aaPredicted RBP20.32■□□□□ 0.84
PRKCB-209ENST00000498058 UROC1Q96N76 676 aa20.32■□□□□ 0.84
PRKCB-209ENST00000498058 PLIN2Q99541 437 aa20.32■□□□□ 0.84
PRKCB-209ENST00000498058 CCDC94Q9BW85 323 aaPredicted RBP20.32■□□□□ 0.84
PRKCB-209ENST00000498058 MRPL4Q9BYD3 311 aaKnown RBP20.32■□□□□ 0.84
PRKCB-209ENST00000498058 ARHGEF3Q9NR81 526 aa20.32■□□□□ 0.84
PRKCB-209ENST00000498058 CACNA1IQ9P0X4 2223 aa20.31■□□□□ 0.84
PRKCB-209ENST00000498058 PODXLO00592 558 aa20.31■□□□□ 0.84
PRKCB-209ENST00000498058 TBC1D4O60343 1298 aa20.31■□□□□ 0.84
PRKCB-209ENST00000498058 CD2BP2O95400 341 aaKnown RBP20.31■□□□□ 0.84
PRKCB-209ENST00000498058 POU2F2P09086 479 aa20.31■□□□□ 0.84
PRKCB-209ENST00000498058 DMP1Q13316 513 aaPredicted RBP20.31■□□□□ 0.84
PRKCB-209ENST00000498058 BECN1Q14457 450 aa20.31■□□□□ 0.84
PRKCB-209ENST00000498058 SLC5A9Q2M3M2 681 aa20.31■□□□□ 0.84
PRKCB-209ENST00000498058 PHLDB3Q6NSJ2 640 aa20.31■□□□□ 0.84
PRKCB-209ENST00000498058 DTHD1Q6ZMT9 781 aa20.31■□□□□ 0.84
PRKCB-209ENST00000498058 ING5Q8WYH8 240 aa20.31■□□□□ 0.84
PRKCB-209ENST00000498058 RAB34Q9BZG1 259 aa20.31■□□□□ 0.84
PRKCB-209ENST00000498058 FOXQ1Q9C009 403 aa20.31■□□□□ 0.84
PRKCB-209ENST00000498058 HAPLN2Q9GZV7 340 aa20.31■□□□□ 0.84
PRKCB-209ENST00000498058 STK24Q9Y6E0 443 aa20.31■□□□□ 0.84
PRKCB-209ENST00000498058 ZFP37Q9Y6Q3 630 aaPredicted RBP20.31■□□□□ 0.84
PRKCB-209ENST00000498058 WDR27A2RRH5 827 aa20.3■□□□□ 0.84
PRKCB-209ENST00000498058 LAD1O00515 517 aa20.3■□□□□ 0.84
PRKCB-209ENST00000498058 NRG2O14511 850 aaPredicted RBP20.3■□□□□ 0.84
PRKCB-209ENST00000498058 MCF2P10911 925 aa20.3■□□□□ 0.84
PRKCB-209ENST00000498058 HARSP12081 509 aaKnown RBP20.3■□□□□ 0.84
PRKCB-209ENST00000498058 KCNE1P15382 129 aa20.3■□□□□ 0.84
PRKCB-209ENST00000498058 ATP2C1P98194 919 aaPredicted RBP20.3■□□□□ 0.84
PRKCB-209ENST00000498058 ROR1Q01973 937 aa20.3■□□□□ 0.84
PRKCB-209ENST00000498058 ZRSR1Q15695 479 aaKnown RBP20.3■□□□□ 0.84
PRKCB-209ENST00000498058 UVSSAQ2YD98 709 aa20.3■□□□□ 0.84
PRKCB-209ENST00000498058 SPECC1Q5M775 1068 aa20.3■□□□□ 0.84
PRKCB-209ENST00000498058 VARS2Q5ST30 1063 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms