RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 MRPL9Q9BYD2 267 aaKnown RBP14.71□□□□□ -0.05
CPNE1-227ENST00000498056 MTMR12Q9C0I1 747 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 TMEM117Q9H0C3 514 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 METTL14Q9HCE5 456 aaKnown RBP14.71□□□□□ -0.05
CPNE1-227ENST00000498056 PLAGL2Q9UPG8 496 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 LRRIQ3A6PVS8 624 aaPredicted RBP14.7□□□□□ -0.06
CPNE1-227ENST00000498056 PES1O00541 588 aaKnown RBP14.7□□□□□ -0.06
CPNE1-227ENST00000498056 PTGESO14684 152 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 OFD1O75665 1012 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 DLG4P78352 724 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 NOMO2Q5JPE7 1267 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 FRMD5Q7Z6J6 570 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 WDR49Q8IV35 697 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 HERC6Q8IVU3 1022 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 CD302Q8IX05 232 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 ANKRD20A12PQ8NF67 263 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 ANKRD36BP1Q96IX9 119 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 MFSD14AQ96MC6 490 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 ZMAT2Q96NC0 199 aaKnown RBP14.7□□□□□ -0.06
CPNE1-227ENST00000498056 ASB7Q9H672 318 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 PLEKHA5Q9HAU0 1116 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 TAB2Q9NYJ8 693 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 HCSTQ9UBK5 93 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 TUBGCP4Q9UGJ1 667 aa14.7□□□□□ -0.06
CPNE1-227ENST00000498056 SMIM28A0A1B0GU29 152 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 XPOTO43592 962 aaKnown RBP14.69□□□□□ -0.06
CPNE1-227ENST00000498056 TLL1O43897 1013 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 DGKIO75912 1065 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 GJB5O95377 273 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 TNNC2P02585 160 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 THP07101 528 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 TPM2P07951 284 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 ATP1A3P13637 1013 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 PRKCSHP14314 528 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-227ENST00000498056 CDK11BP21127 795 aaKnown RBP14.69□□□□□ -0.06
CPNE1-227ENST00000498056 EEF1GP26641 437 aaKnown RBP14.69□□□□□ -0.06
CPNE1-227ENST00000498056 GUCY2FP51841 1108 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 MARSP56192 900 aaKnown RBP14.69□□□□□ -0.06
CPNE1-227ENST00000498056 MYL7Q01449 175 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 POU5F1Q01860 360 aaKnown RBP14.69□□□□□ -0.06
CPNE1-227ENST00000498056 BIRC3Q13489 604 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 TCP11X2Q5H9J9 407 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 RASIP1Q5U651 963 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 GAS2L3Q86XJ1 694 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 TRIM59Q8IWR1 403 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 CRIPAKQ8N1N5 446 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 BEST2Q8NFU1 509 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 TMC2Q8TDI7 906 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 PARD3BQ8TEW8 1205 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 C18orf25Q96B23 403 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-227ENST00000498056 CASD1Q96PB1 797 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 FAM193BQ96PV7 902 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-227ENST00000498056 POP1Q99575 1024 aaKnown RBP14.69□□□□□ -0.06
CPNE1-227ENST00000498056 HSD3B7Q9H2F3 369 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 GOLGA2P5Q9HBQ8 144 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 TBC1D13Q9NVG8 400 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 CACNG4Q9UBN1 327 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 UBQLN1Q9UMX0 589 aaKnown RBP14.69□□□□□ -0.06
CPNE1-227ENST00000498056 C2CD2Q9Y426 696 aa14.69□□□□□ -0.06
CPNE1-227ENST00000498056 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.69□□□□□ -0.06
CPNE1-227ENST00000498056 CASTOR2A6NHX0 329 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 ZC3H11AO75152 810 aaKnown RBP eCLIP14.68□□□□□ -0.06
CPNE1-227ENST00000498056 KCNE1P15382 129 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 MXI1P50539 228 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 BTG3Q14201 252 aaPredicted RBP14.68□□□□□ -0.06
CPNE1-227ENST00000498056 KRT31Q15323 416 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 MAN2A1Q16706 1144 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 SPOUT1Q5T280 376 aaKnown RBP14.68□□□□□ -0.06
CPNE1-227ENST00000498056 ALKAL1Q6UXT8 129 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 IRF2BP1Q8IU81 584 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 CMTR2Q8IYT2 770 aaKnown RBP14.68□□□□□ -0.06
CPNE1-227ENST00000498056 TDHQ8IZJ6 230 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 TMEM130Q8N3G9 435 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 GSTCDQ8NEC7 633 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 OR5B17Q8NGF7 314 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 SLC35C1Q96A29 364 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 BORCS6Q96GS4 357 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 PPP1R10Q96QC0 940 aaKnown RBP14.68□□□□□ -0.06
CPNE1-227ENST00000498056 RBSNQ9H1K0 784 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 RC3H2Q9HBD1 1191 aaKnown RBP14.68□□□□□ -0.06
CPNE1-227ENST00000498056 SLC38A7Q9NVC3 462 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 MIOSQ9NXC5 875 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 DERAQ9Y315 318 aa14.68□□□□□ -0.06
CPNE1-227ENST00000498056 INPPL1O15357 1258 aa14.67□□□□□ -0.06
CPNE1-227ENST00000498056 STX10O60499 249 aa14.67□□□□□ -0.06
CPNE1-227ENST00000498056 KRT19P08727 400 aa14.67□□□□□ -0.06
CPNE1-227ENST00000498056 ZNF18P17022 549 aa14.67□□□□□ -0.06
CPNE1-227ENST00000498056 PIK3CAP42336 1068 aa14.67□□□□□ -0.06
CPNE1-227ENST00000498056 GCLMP48507 274 aa14.67□□□□□ -0.06
CPNE1-227ENST00000498056 RABGGTBP53611 331 aa14.67□□□□□ -0.06
CPNE1-227ENST00000498056 SOX4Q06945 474 aaPredicted RBP14.67□□□□□ -0.06
CPNE1-227ENST00000498056 TUSC3Q13454 348 aa14.67□□□□□ -0.06
CPNE1-227ENST00000498056 XKR4Q5GH76 650 aa14.67□□□□□ -0.06
CPNE1-227ENST00000498056 FAM109BQ6ICB4 259 aaPredicted RBP14.67□□□□□ -0.06
CPNE1-227ENST00000498056 NT5DC4Q86YG4 428 aa14.67□□□□□ -0.06
CPNE1-227ENST00000498056 PHOSPHO2Q8TCD6 241 aa14.67□□□□□ -0.06
CPNE1-227ENST00000498056 CACTINQ8WUQ7 758 aaKnown RBP14.67□□□□□ -0.06
CPNE1-227ENST00000498056 RSPH1Q8WYR4 309 aa14.67□□□□□ -0.06
CPNE1-227ENST00000498056 TUBGCP2Q9BSJ2 902 aa14.67□□□□□ -0.06
CPNE1-227ENST00000498056 INTS13Q9NVM9 706 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms