RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 L1TD1Q5T7N2 865 aaKnown RBP12.28□□□□□ -0.44
ERCC8-208ENST00000497892 UNC13DQ70J99 1090 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 GRAMD1CQ8IYS0 662 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 PPM1EQ8WY54 764 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 HPS3Q969F9 1004 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 PAGE5Q96GU1 130 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 IGSF21Q96ID5 467 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 SNX27Q96L92 541 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 CXCL16Q9H2A7 254 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 MARCH5Q9NX47 278 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 EXOC7Q9UPT5 735 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 STYXL1Q9Y6J8 313 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 A0A0B4J269 797 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 PVALEFA0A1B0GWK0 134 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 TISP43B9A030 160 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 ANKRD63C9JTQ0 380 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 NRP1O14786 923 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 FSCN2O14926 492 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 MEFVO15553 781 aaPredicted RBP12.27□□□□□ -0.45
ERCC8-208ENST00000497892 CSPG5O95196 566 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 ALDH2P05091 517 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 THP07101 528 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 CLTAP09496 248 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 MATR3P43243 847 aaKnown RBP eCLIP12.27□□□□□ -0.45
ERCC8-208ENST00000497892 ERVFC1P60507 584 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 KCNA1Q09470 495 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 TUSC3Q13454 348 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 COL19A1Q14993 1142 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 KYAT1Q16773 422 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 TCEAL5Q5H9L2 206 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 GLRA4Q5JXX5 417 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 FAM26FQ5R3K3 315 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 PDE12Q6L8Q7 609 aaKnown RBP12.27□□□□□ -0.45
ERCC8-208ENST00000497892 ALKAL1Q6UXT8 129 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 KRBA2Q6ZNG9 492 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 STXBP4Q6ZWJ1 553 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 GLIS3Q8NEA6 775 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 ACAP3Q96P50 834 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 PPP1R10Q96QC0 940 aaKnown RBP12.27□□□□□ -0.45
ERCC8-208ENST00000497892 ACCSQ96QU6 501 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 TCF25Q9BQ70 676 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 VN1R3Q9BXE9 311 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 IKZF4Q9H2S9 585 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 CNTN3Q9P232 1028 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 PUF60Q9UHX1 559 aaKnown RBP12.27□□□□□ -0.45
ERCC8-208ENST00000497892 FAN1Q9Y2M0 1017 aa12.27□□□□□ -0.45
ERCC8-208ENST00000497892 GOLGA6L4A6NEF3 574 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 OGTO15294 1046 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 EIF3DO15371 548 aaKnown RBP eCLIP12.26□□□□□ -0.45
ERCC8-208ENST00000497892 NR1I2O75469 434 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 EFEMP2O95967 443 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 KCNE1P15382 129 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 OR1G1P47890 313 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 SLC10A6Q3KNW5 377 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 TPRNQ4KMQ1 711 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 SEZ6Q53EL9 994 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 ZBTB41Q5SVQ8 909 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 SLFN12LQ6IEE8 588 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 EPM2AIP1Q7L775 607 aaPredicted RBP12.26□□□□□ -0.45
ERCC8-208ENST00000497892 DDX53Q86TM3 631 aaKnown RBP12.26□□□□□ -0.45
ERCC8-208ENST00000497892 FMR1NBQ8N0W7 255 aaPredicted RBP12.26□□□□□ -0.45
ERCC8-208ENST00000497892 MSTO1Q9BUK6 570 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 ZBP1Q9H171 429 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 TMEM206Q9H813 350 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 ENTPD7Q9NQZ7 604 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 STK39Q9UEW8 545 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 PRG3Q9Y2Y8 225 aaPredicted RBP12.26□□□□□ -0.45
ERCC8-208ENST00000497892 PCDHGC5Q9Y5F6 944 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 UBE4BO95155 1302 aa12.26□□□□□ -0.45
ERCC8-208ENST00000497892 SMIM28A0A1B0GU29 152 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 TTC26A0AVF1 554 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 CASTOR2A6NHX0 329 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 F8W810 466 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 KLRC4O43908 158 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 PRPF6O94906 941 aaKnown RBP12.25□□□□□ -0.45
ERCC8-208ENST00000497892 ZNF202O95125 648 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 CXCL8P10145 99 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 ADSSP30520 456 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 HOXD13P35453 343 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 TNFSF9P41273 254 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 FAM160A1Q05DH4 1040 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 HSP90AA2PQ14568 343 aaPredicted RBP12.25□□□□□ -0.45
ERCC8-208ENST00000497892 SKIV2LQ15477 1246 aaKnown RBP12.25□□□□□ -0.45
ERCC8-208ENST00000497892 ENOX2Q16206 610 aaKnown RBP12.25□□□□□ -0.45
ERCC8-208ENST00000497892 TJAP1Q5JTD0 557 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 ADGRD2Q7Z7M1 963 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 RNF168Q8IYW5 571 aaPredicted RBP12.25□□□□□ -0.45
ERCC8-208ENST00000497892 TMEM87AQ8NBN3 555 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 PPP2R3CQ969Q6 453 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 ZMAT2Q96NC0 199 aaKnown RBP12.25□□□□□ -0.45
ERCC8-208ENST00000497892 PAAF1Q9BRP4 392 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 COLEC11Q9BWP8 271 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 IRX2Q9BZI1 471 aaPredicted RBP12.25□□□□□ -0.45
ERCC8-208ENST00000497892 PLEKHA5Q9HAU0 1116 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 NGRNQ9NPE2 291 aaKnown RBP12.25□□□□□ -0.45
ERCC8-208ENST00000497892 PRDM6Q9NQX0 595 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 SLC38A7Q9NVC3 462 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 THEGQ9P2T0 379 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 CACNG4Q9UBN1 327 aa12.25□□□□□ -0.45
ERCC8-208ENST00000497892 CPSF3Q9UKF6 684 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms