RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 DSG1Q02413 1049 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 KNOP1Q1ED39 458 aaKnown RBP13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 CMPK2Q5EBM0 449 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 TTC7BQ86TV6 843 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 SNF8Q96H20 258 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 GPCPD1Q9NPB8 672 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 ATP8A2Q9NTI2 1148 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 NDE1Q9NXR1 346 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 H3BRJ5 948 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 CALUO43852 315 aaPredicted RBP13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 PLS3P13797 630 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 CYP11B2P19099 503 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 CTNNA2P26232 953 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 FXR2P51116 673 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■■□□□ 11.5
GAPVD1-220ENST00000497580 C3orf67Q6ZVT6 689 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 FRMD5Q7Z6J6 570 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 SATL1Q86VE3 508 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 TGFBRAP1Q8WUH2 860 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 TIAM2Q8IVF5 1701 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 MIF4GDA9UHW6 222 aaKnown RBP13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 ZNF189O75820 626 aaPredicted RBP13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 ASMTLO95671 621 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 VAV1P15498 845 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 Q4G0T1 1027 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 PABPC1LQ4VXU2 614 aaKnown RBP13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 MARK2Q7KZI7 788 aaKnown RBP13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 HAUS1Q96CS2 278 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 CLMNQ96JQ2 1002 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 ANGPTL2Q9UKU9 493 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 PCDHA3Q9Y5H8 950 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 DUOX1Q9NRD9 1551 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 NCANO14594 1321 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 TMEM119Q4V9L6 283 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 PLEKHG4Q58EX7 1191 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 FAM186BQ8IYM0 893 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 WDR66Q8TBY9 1149 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 CELF1Q92879 486 aaKnown RBP13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 METTL14Q9HCE5 456 aaKnown RBP13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 PCDHGA4Q9Y5G9 962 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 FOXN3O00409 490 aaPredicted RBP13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 RNASEH1O60930 286 aaKnown RBP13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 GAS8O95995 478 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 ENO1P06733 434 aaKnown RBP13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 KDSRQ06136 332 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 BTKQ06187 659 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 RASSF3Q86WH2 238 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 NSL1Q96IY1 281 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 TMCO1Q9UM00 188 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 A0A1W2PPM1 405 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 ADRA1DP25100 572 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 JAM2P57087 298 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 ERFEQ4G0M1 354 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 C6orf163Q5TEZ5 329 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 CLEC10AQ8IUN9 316 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 RNF168Q8IYW5 571 aaPredicted RBP13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 AGBL1Q96MI9 1066 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 EBF3Q9H4W6 596 aa13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 STX18Q9P2W9 335 aaKnown RBP13.87□□□□□ -0.19
GAPVD1-220ENST00000497580 B2RBV5 119 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 ECE2O60344 883 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 CIB2O75838 187 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 HARSP12081 509 aaKnown RBP13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 RPL13P26373 211 aaKnown RBP13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 CDK7P50613 346 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 GALK1P51570 392 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 ARFIP2P53365 341 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 EDRF1Q3B7T1 1238 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 C1orf146Q5VVC0 180 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 SESTD1Q86VW0 696 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 MAP7D3Q8IWC1 876 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 RHOT2Q8IXI1 618 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 NAT14Q8WUY8 206 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 MAML1Q92585 1016 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 ZNF75CPQ92670 426 aaPredicted RBP13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 SLC5A5Q92911 643 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 THTPAQ9BU02 230 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 ADGRA3Q8IWK6 1321 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 MAGEB3O15480 346 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 TBCAO75347 108 aaKnown RBP13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 ITGA2BP08514 1039 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 FUT4P22083 530 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 RRM1P23921 792 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 MARSP56192 900 aaKnown RBP13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 PSMC6P62333 389 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 COG7P83436 770 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 TMEM63BQ5T3F8 832 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 DAB2IPQ5VWQ8 1189 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 IZUMO3Q5VZ72 239 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 RBM15Q96T37 977 aaKnown RBP eCLIP13.86□□□□□ -0.193e-7■■□□□ 11.4
GAPVD1-220ENST00000497580 COMMD3-BMI1R4GMX3 469 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 ZWINTO95229 277 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 FGFR1P11362 822 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 CRKLP46109 303 aaKnown RBP13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 LSAMPQ13449 338 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 CLUL1Q15846 466 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 DPY19L2P1Q6NXN4 242 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 CCDC174Q6PII3 467 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 LRRC6Q86X45 466 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 NME8Q8N427 588 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 SLC30A5Q8TAD4 765 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms