RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 GATMP50440 423 aa21.77■■□□□ 1.08
CTSD-206ENST00000497544 TPD52L1Q16890 204 aaPredicted RBP21.77■■□□□ 1.08
CTSD-206ENST00000497544 CLLU1OSQ5K130 101 aa21.77■■□□□ 1.08
CTSD-206ENST00000497544 CRELD2Q6UXH1 353 aaPredicted RBP21.77■■□□□ 1.08
CTSD-206ENST00000497544 TMEM174Q8WUU8 243 aa21.77■■□□□ 1.08
CTSD-206ENST00000497544 RSPH1Q8WYR4 309 aa21.77■■□□□ 1.08
CTSD-206ENST00000497544 GZF1Q9H116 711 aaPredicted RBP21.77■■□□□ 1.08
CTSD-206ENST00000497544 PLEKHA5Q9HAU0 1116 aa21.77■■□□□ 1.08
CTSD-206ENST00000497544 RNF19AQ9NV58 838 aa21.77■■□□□ 1.08
CTSD-206ENST00000497544 KANSL3Q9P2N6 904 aa21.77■■□□□ 1.08
CTSD-206ENST00000497544 COL4A4P53420 1690 aaPredicted RBP21.76■■□□□ 1.07
CTSD-206ENST00000497544 ARL5CA6NH57 179 aa21.76■■□□□ 1.07
CTSD-206ENST00000497544 EPOPA6NHQ4 379 aa21.76■■□□□ 1.07
CTSD-206ENST00000497544 CXCL8P10145 99 aa21.76■■□□□ 1.07
CTSD-206ENST00000497544 MLH1P40692 756 aa21.76■■□□□ 1.07
CTSD-206ENST00000497544 PPP2R3AQ06190 1150 aa21.76■■□□□ 1.07
CTSD-206ENST00000497544 SLC10A6Q3KNW5 377 aa21.76■■□□□ 1.07
CTSD-206ENST00000497544 PAN2Q504Q3 1202 aaKnown RBP21.76■■□□□ 1.07
CTSD-206ENST00000497544 NOMO2Q5JPE7 1267 aa21.76■■□□□ 1.07
CTSD-206ENST00000497544 TTI2Q6NXR4 508 aa21.76■■□□□ 1.07
CTSD-206ENST00000497544 FOXR2Q6PJQ5 311 aa21.76■■□□□ 1.07
CTSD-206ENST00000497544 CD302Q8IX05 232 aa21.76■■□□□ 1.07
CTSD-206ENST00000497544 ZNF689Q96CS4 500 aaPredicted RBP21.76■■□□□ 1.07
CTSD-206ENST00000497544 CASD1Q96PB1 797 aa21.76■■□□□ 1.07
CTSD-206ENST00000497544 PCDHA11Q9Y5I1 949 aa21.76■■□□□ 1.07
CTSD-206ENST00000497544 ZDBF2Q9HCK1 2354 aa21.75■■□□□ 1.07
CTSD-206ENST00000497544 LACTBL1A8MY62 500 aa21.75■■□□□ 1.07
CTSD-206ENST00000497544 FGFR1OPO95684 399 aaKnown RBP21.75■■□□□ 1.07
CTSD-206ENST00000497544 HTRA4P83105 476 aaPredicted RBP21.75■■□□□ 1.07
CTSD-206ENST00000497544 BTG3Q14201 252 aaPredicted RBP21.75■■□□□ 1.07
CTSD-206ENST00000497544 ENOX2Q16206 610 aaKnown RBP21.75■■□□□ 1.07
CTSD-206ENST00000497544 SNRNP35Q16560 246 aaKnown RBP21.75■■□□□ 1.07
CTSD-206ENST00000497544 CBWD2Q8IUF1 395 aa21.75■■□□□ 1.07
CTSD-206ENST00000497544 CSGALNACT2Q8N6G5 542 aa21.75■■□□□ 1.07
CTSD-206ENST00000497544 ZFP42Q96MM3 310 aa21.75■■□□□ 1.07
CTSD-206ENST00000497544 DUSP9Q99956 384 aaKnown RBP21.75■■□□□ 1.07
CTSD-206ENST00000497544 NAT10Q9H0A0 1025 aaKnown RBP21.75■■□□□ 1.07
CTSD-206ENST00000497544 DNAJC25Q9H1X3 360 aa21.75■■□□□ 1.07
CTSD-206ENST00000497544 MIOSQ9NXC5 875 aa21.75■■□□□ 1.07
CTSD-206ENST00000497544 RBAKQ9NYW8 714 aaPredicted RBP21.75■■□□□ 1.07
CTSD-206ENST00000497544 FNDC1Q4ZHG4 1894 aaPredicted RBP21.75■■□□□ 1.07
CTSD-206ENST00000497544 TTC26A0AVF1 554 aa21.74■■□□□ 1.07
CTSD-206ENST00000497544 IL18RAPO95256 599 aa21.74■■□□□ 1.07
CTSD-206ENST00000497544 POMCP01189 267 aa21.74■■□□□ 1.07
CTSD-206ENST00000497544 PSMC2P35998 433 aaKnown RBP21.74■■□□□ 1.07
CTSD-206ENST00000497544 CASP4P49662 377 aa21.74■■□□□ 1.07
CTSD-206ENST00000497544 RNASELQ05823 741 aaKnown RBP21.74■■□□□ 1.07
CTSD-206ENST00000497544 SURF1Q15526 300 aa21.74■■□□□ 1.07
CTSD-206ENST00000497544 ALKAL1Q6UXT8 129 aa21.74■■□□□ 1.07
CTSD-206ENST00000497544 BRSK2Q8IWQ3 736 aa21.74■■□□□ 1.07
CTSD-206ENST00000497544 CMTR2Q8IYT2 770 aaKnown RBP21.74■■□□□ 1.07
CTSD-206ENST00000497544 CEP63Q96MT8 703 aa21.74■■□□□ 1.07
CTSD-206ENST00000497544 FAM193BQ96PV7 902 aaPredicted RBP21.74■■□□□ 1.07
CTSD-206ENST00000497544 SRRTQ9BXP5 876 aaKnown RBP21.74■■□□□ 1.07
CTSD-206ENST00000497544 MRPL9Q9BYD2 267 aaKnown RBP21.74■■□□□ 1.07
CTSD-206ENST00000497544 ASB7Q9H672 318 aa21.74■■□□□ 1.07
CTSD-206ENST00000497544 CERS4Q9HA82 394 aa21.74■■□□□ 1.07
CTSD-206ENST00000497544 TDRD15B5MCY1 1934 aaKnown RBP21.73■■□□□ 1.07
CTSD-206ENST00000497544 THP07101 528 aa21.73■■□□□ 1.07
CTSD-206ENST00000497544 SCNN1GP51170 649 aa21.73■■□□□ 1.07
CTSD-206ENST00000497544 ANO6Q4KMQ2 910 aa21.73■■□□□ 1.07
CTSD-206ENST00000497544 XKR4Q5GH76 650 aa21.73■■□□□ 1.07
CTSD-206ENST00000497544 C11orf57Q6ZUT1 292 aaPredicted RBP21.73■■□□□ 1.07
CTSD-206ENST00000497544 FILIP1Q7Z7B0 1213 aa21.73■■□□□ 1.07
CTSD-206ENST00000497544 GJD3Q8N144 294 aa21.73■■□□□ 1.07
CTSD-206ENST00000497544 EEF2KMTQ96G04 330 aa21.73■■□□□ 1.07
CTSD-206ENST00000497544 TSPAN18Q96SJ8 248 aa21.73■■□□□ 1.07
CTSD-206ENST00000497544 FUCA2Q9BTY2 467 aa21.73■■□□□ 1.07
CTSD-206ENST00000497544 CNTN3Q9P232 1028 aa21.73■■□□□ 1.07
CTSD-206ENST00000497544 SMIM28A0A1B0GU29 152 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 MAPK13O15264 365 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 INPPL1O15357 1258 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 AKAP3O75969 853 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 ADRB2P07550 413 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 EPB41P11171 864 aaKnown RBP21.72■■□□□ 1.07
CTSD-206ENST00000497544 AFF1P51825 1210 aaKnown RBP21.72■■□□□ 1.07
CTSD-206ENST00000497544 CYP24A1Q07973 514 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 GLRA4Q5JXX5 417 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 SPOUT1Q5T280 376 aaKnown RBP21.72■■□□□ 1.07
CTSD-206ENST00000497544 ZC3H3Q8IXZ2 948 aaKnown RBP21.72■■□□□ 1.07
CTSD-206ENST00000497544 FAM186BQ8IYM0 893 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 FIBCD1Q8N539 461 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 GSTCDQ8NEC7 633 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 KIF12Q96FN5 646 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 MFSD14AQ96MC6 490 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 FNBP1Q96RU3 617 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 MKNK1Q9BUB5 465 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 CXCL16Q9H2A7 254 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 PDE11AQ9HCR9 933 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 TBC1D13Q9NVG8 400 aa21.72■■□□□ 1.07
CTSD-206ENST00000497544 PTGESO14684 152 aa21.71■■□□□ 1.07
CTSD-206ENST00000497544 MEFVO15553 781 aaPredicted RBP21.71■■□□□ 1.07
CTSD-206ENST00000497544 KRT13P13646 458 aa21.71■■□□□ 1.07
CTSD-206ENST00000497544 KCNE1P15382 129 aa21.71■■□□□ 1.07
CTSD-206ENST00000497544 FOXK2Q01167 660 aa21.71■■□□□ 1.07
CTSD-206ENST00000497544 SPAG1Q07617 926 aa21.71■■□□□ 1.07
CTSD-206ENST00000497544 GRIK3Q13003 919 aa21.71■■□□□ 1.07
CTSD-206ENST00000497544 SPATA1Q5VX52 437 aa21.71■■□□□ 1.07
CTSD-206ENST00000497544 LRRC43Q8N309 656 aa21.71■■□□□ 1.07
CTSD-206ENST00000497544 ENOX1Q8TC92 643 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms