RNA–Protein interactions for RNA: ENST00000496925.5

PSMD2-220, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 723 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-220	ENST00000496925	RUSC1	Q9BVN2	902 aa		11.22	□□□□□ -0.61
PSMD2-220	ENST00000496925	CCDC94	Q9BW85	323 aa	Predicted RBP	11.22	□□□□□ -0.61
PSMD2-220	ENST00000496925	FOXP1	Q9H334	677 aa	Predicted RBP	11.22	□□□□□ -0.61
PSMD2-220	ENST00000496925	KMT5A	Q9NQR1	393 aa		11.22	□□□□□ -0.61
PSMD2-220	ENST00000496925	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.22	□□□□□ -0.61
PSMD2-220	ENST00000496925	DNM3	Q9UQ16	869 aa		11.22	□□□□□ -0.61
PSMD2-220	ENST00000496925	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	PODXL	O00592	558 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	PRRG1	O14668	218 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	SP9	P0CG40	484 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	MATR3	P43243	847 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	ID4	P47928	161 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	NPTX2	P47972	431 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	TOB1	P50616	345 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	EFNA5	P52803	228 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	CACNB1	Q02641	598 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	CSTF1	Q05048	431 aa	Known RBP	11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	ELAVL2	Q12926	359 aa	Known RBP	11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	GRM2	Q14416	872 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	IL17A	Q16552	155 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	HAUS3	Q68CZ6	603 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	POTEH	Q6S545	545 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	C1orf210	Q8IVY1	113 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	FBXO18	Q8NFZ0	1043 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	KIFAP3	Q92845	792 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	TCEAL4	Q96EI5	215 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	DDX27	Q96GQ7	796 aa	Known RBP	11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	ZMAT2	Q96NC0	199 aa	Known RBP	11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	PPP1R10	Q96QC0	940 aa	Known RBP	11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	ACO2	Q99798	780 aa	Known RBP	11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	CORO1B	Q9BR76	489 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	CDT1	Q9H211	546 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	CYP4F11	Q9HBI6	524 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	TNFSF13B	Q9Y275	285 aa		11.21	□□□□□ -0.61
PSMD2-220	ENST00000496925	SEC24A	O95486	1093 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	LMNA	P02545	664 aa	Known RBP	11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	LRG1	P02750	347 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	RHO	P08100	348 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	GJA1	P17302	382 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	CEBPB	P17676	345 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	FXR2	P51116	673 aa	Known RBP eCLIP	11.2	□□□□□ -0.62	2e-10	■■■□□ 17.9
PSMD2-220	ENST00000496925	DHX8	Q14562	1220 aa	Known RBP	11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	UPP1	Q16831	310 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	SLC5A9	Q2M3M2	681 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	VARS2	Q5ST30	1063 aa	Known RBP	11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	KRT79	Q5XKE5	535 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	TANGO2	Q6ICL3	276 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	PHLDB3	Q6NSJ2	640 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	PDXDC1	Q6P996	788 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	TSSK4	Q6SA08	328 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	TAS1R3	Q7RTX0	852 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	KCNK18	Q7Z418	384 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	NPAS3	Q8IXF0	933 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	GPR65	Q8IYL9	337 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	HS6ST3	Q8IZP7	471 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	SHD	Q96IW2	340 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	ACAP3	Q96P50	834 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	LLPH	Q9BRT6	129 aa	Known RBP	11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	MRPL4	Q9BYD3	311 aa	Known RBP	11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	RHOBTB2	Q9BYZ6	727 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	SLC2A4RG	Q9NR83	387 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	ANKFY1	Q9P2R3	1169 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	MTRR	Q9UBK8	725 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	NUB1	Q9Y5A7	615 aa		11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD2-220	ENST00000496925	PLXNA3	P51805	1871 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	KANSL1L	A0AUZ9	987 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	TRAPPC3	O43617	180 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	MYL4	P12829	197 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	PTPN2	P17706	415 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	GRM5	P41594	1212 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	STARD6	P59095	220 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	ROR1	Q01973	937 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	DMP1	Q13316	513 aa	Predicted RBP	11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	MLF2	Q15773	248 aa	Predicted RBP	11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	CTXN3	Q4LDR2	81 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	RINT1	Q6NUQ1	792 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	DTHD1	Q6ZMT9	781 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	TPRG1	Q6ZUI0	275 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	ANKS3	Q6ZW76	656 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	MTSS1L	Q765P7	747 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	DAW1	Q8N136	415 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	PJA1	Q8NG27	643 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	BCO2	Q9BYV7	579 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	HEBP1	Q9NRV9	189 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	DLGAP2	Q9P1A6	1054 aa		11.19	□□□□□ -0.62
PSMD2-220	ENST00000496925	WDR27	A2RRH5	827 aa		11.18	□□□□□ -0.62
PSMD2-220	ENST00000496925	NRG2	O14511	850 aa	Predicted RBP	11.18	□□□□□ -0.62
PSMD2-220	ENST00000496925	MEFV	O15553	781 aa	Predicted RBP	11.18	□□□□□ -0.62
PSMD2-220	ENST00000496925	LAMTOR5	O43504	91 aa		11.18	□□□□□ -0.62
PSMD2-220	ENST00000496925	C1R	P00736	705 aa		11.18	□□□□□ -0.62
PSMD2-220	ENST00000496925	OR4Q2	P0C623	313 aa		11.18	□□□□□ -0.62
PSMD2-220	ENST00000496925	MARCKS	P29966	332 aa	Predicted RBP	11.18	□□□□□ -0.62
PSMD2-220	ENST00000496925	MCM4	P33991	863 aa		11.18	□□□□□ -0.62
PSMD2-220	ENST00000496925	GUCY2F	P51841	1108 aa		11.18	□□□□□ -0.62
PSMD2-220	ENST00000496925	STRN3	Q13033	797 aa		11.18	□□□□□ -0.62
PSMD2-220	ENST00000496925	PDIA5	Q14554	519 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms