RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 ENPEPQ07075 957 aa18.23■□□□□ 0.51
LMNA-216ENST00000496738 PTK7Q13308 1070 aa18.23■□□□□ 0.51
LMNA-216ENST00000496738 WDR49Q8IV35 697 aa18.23■□□□□ 0.51
LMNA-216ENST00000496738 PPM1KQ8N3J5 372 aa18.23■□□□□ 0.51
LMNA-216ENST00000496738 CXCL16Q9H2A7 254 aa18.23■□□□□ 0.51
LMNA-216ENST00000496738 NXF3Q9H4D5 531 aaKnown RBP18.23■□□□□ 0.51
LMNA-216ENST00000496738 SNTG2Q9NY99 539 aa18.23■□□□□ 0.51
LMNA-216ENST00000496738 ARHGAP20Q9P2F6 1191 aa18.23■□□□□ 0.51
LMNA-216ENST00000496738 COQ4Q9Y3A0 265 aa18.23■□□□□ 0.51
LMNA-216ENST00000496738 DNM1LO00429 736 aa18.23■□□□□ 0.51
LMNA-216ENST00000496738 RPS6KA5O75582 802 aa18.23■□□□□ 0.51
LMNA-216ENST00000496738 DRAP1Q14919 205 aaPredicted RBP18.23■□□□□ 0.51
LMNA-216ENST00000496738 SLC10A6Q3KNW5 377 aa18.23■□□□□ 0.51
LMNA-216ENST00000496738 DCAF4L1Q3SXM0 396 aa18.23■□□□□ 0.51
LMNA-216ENST00000496738 SPOPLQ6IQ16 392 aa18.23■□□□□ 0.51
LMNA-216ENST00000496738 ACRBPQ8NEB7 543 aa18.23■□□□□ 0.51
LMNA-216ENST00000496738 NHEJ1Q9H9Q4 299 aaPredicted RBP18.23■□□□□ 0.51
LMNA-216ENST00000496738 RNF19AQ9NV58 838 aa18.23■□□□□ 0.51
LMNA-216ENST00000496738 PMM2O15305 246 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 GHRP10912 638 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 JAM2P57087 298 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 PTPN11Q06124 597 aaPredicted RBP18.22■□□□□ 0.51
LMNA-216ENST00000496738 PCBP1Q15365 356 aaKnown RBP eCLIP18.22■□□□□ 0.512e-6■□□□□ 9
LMNA-216ENST00000496738 ASIC2Q16515 512 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 TDRD12Q587J7 1177 aaKnown RBP18.22■□□□□ 0.51
LMNA-216ENST00000496738 JADE1Q6IE81 842 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 CTU1Q7Z7A3 348 aaKnown RBP18.22■□□□□ 0.51
LMNA-216ENST00000496738 CCAR2Q8N163 923 aaKnown RBP18.22■□□□□ 0.51
LMNA-216ENST00000496738 TATDN2Q93075 761 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 ACAP3Q96P50 834 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 FBXL5Q9UKA1 691 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 ST3GAL5Q9UNP4 418 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 ANK1P16157 1881 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 GFPT2O94808 682 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 TMEM191BP0C7N4 346 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 HNRNPH3P31942 346 aaKnown RBP18.22■□□□□ 0.51
LMNA-216ENST00000496738 TRIM71Q2Q1W2 868 aaKnown RBP18.22■□□□□ 0.51
LMNA-216ENST00000496738 ZNF618Q5T7W0 954 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 CNPY4Q8N129 248 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 GPR88Q9GZN0 384 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 AGO3Q9H9G7 860 aaKnown RBP18.22■□□□□ 0.51
LMNA-216ENST00000496738 SPTLC3Q9NUV7 552 aa18.22■□□□□ 0.51
LMNA-216ENST00000496738 MROH7Q68CQ1 1323 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 F8VZ95 297 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 ARVCFO00192 962 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 AKAP5P24588 427 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 AXLP30530 894 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 EIF4A3P38919 411 aaKnown RBP18.21■□□□□ 0.51
LMNA-216ENST00000496738 GRM5P41594 1212 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 UBXN11Q5T124 520 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 HGSNATQ68CP4 663 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 TWF2Q6IBS0 349 aaKnown RBP18.21■□□□□ 0.51
LMNA-216ENST00000496738 TRAPPC11Q7Z392 1133 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 A0A0U1RQJ8 604 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 IL18RAPO95256 599 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 CST3P01034 146 aaPredicted RBP18.21■□□□□ 0.51
LMNA-216ENST00000496738 CD52P31358 61 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 SURF1Q15526 300 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 DUOXA2Q1HG44 320 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 RPAINQ86UA6 219 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 ZNF710Q8N1W2 664 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 SLC43A3Q8NBI5 491 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 ATRIPQ8WXE1 791 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 NT5C1BQ96P26 610 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 STK33Q9BYT3 514 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 NUCKS1Q9H1E3 243 aaKnown RBP18.21■□□□□ 0.51
LMNA-216ENST00000496738 OGDHLQ9ULD0 1010 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 PPP2R2CQ9Y2T4 447 aa18.21■□□□□ 0.51
LMNA-216ENST00000496738 IBSPP21815 317 aaPredicted RBP18.2■□□□□ 0.5
LMNA-216ENST00000496738 NCOA4Q13772 614 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 KREMEN1Q96MU8 473 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 NDUFA10O95299 355 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 USP8P40818 1118 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 STAT1P42224 750 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 KCNJ6P48051 423 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 GUCY2FP51841 1108 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 ATN1P54259 1190 aaPredicted RBP18.2■□□□□ 0.5
LMNA-216ENST00000496738 KLHL30Q0D2K2 578 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 APBB1IPQ7Z5R6 666 aaPredicted RBP18.2■□□□□ 0.5
LMNA-216ENST00000496738 HELQQ8TDG4 1101 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 PPP1R13BQ96KQ4 1090 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 CCDC42Q96M95 316 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 RNF39Q9H2S5 420 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 DEF6Q9H4E7 631 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 C1orf112Q9NSG2 853 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 AIPL1Q9NZN9 384 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 KLK14Q9P0G3 267 aa18.2■□□□□ 0.5
LMNA-216ENST00000496738 UMODL1Q5DID0 1318 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 FOXN3O00409 490 aaPredicted RBP18.19■□□□□ 0.5
LMNA-216ENST00000496738 CLGNO14967 610 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 TNNC2P02585 160 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 KRT19P08727 400 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 CKBP12277 381 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 SOX5P35711 763 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 KYAT1Q16773 422 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 WDR44Q5JSH3 913 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 GLRA4Q5JXX5 417 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 FBXO47Q5MNV8 452 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 SYN2Q92777 582 aaPredicted RBP18.19■□□□□ 0.5
LMNA-216ENST00000496738 ANKRD36BP1Q96IX9 119 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms