RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 XRCC6P12956 609 aaKnown RBP eCLIP14.88□□□□□ -0.03
COL1A1-209ENST00000495677 CTTNQ14247 550 aaKnown RBP14.88□□□□□ -0.03
COL1A1-209ENST00000495677 PRR23CQ6ZRP0 262 aa14.88□□□□□ -0.03
COL1A1-209ENST00000495677 CDR2LQ86X02 465 aaPredicted RBP14.88□□□□□ -0.03
COL1A1-209ENST00000495677 MAP4K3Q8IVH8 894 aa14.88□□□□□ -0.03
COL1A1-209ENST00000495677 SLFN12Q8IYM2 578 aa14.88□□□□□ -0.03
COL1A1-209ENST00000495677 ZNF461Q8TAF7 563 aa14.88□□□□□ -0.03
COL1A1-209ENST00000495677 ASAP3Q8TDY4 903 aa14.88□□□□□ -0.03
COL1A1-209ENST00000495677 HASPINQ8TF76 798 aa14.88□□□□□ -0.03
COL1A1-209ENST00000495677 IRF7Q92985 503 aa14.88□□□□□ -0.03
COL1A1-209ENST00000495677 HSD17B14Q9BPX1 270 aa14.88□□□□□ -0.03
COL1A1-209ENST00000495677 FZD8Q9H461 694 aa14.88□□□□□ -0.03
COL1A1-209ENST00000495677 NCOA5Q9HCD5 579 aaKnown RBP14.88□□□□□ -0.03
COL1A1-209ENST00000495677 ZFP14Q9HCL3 533 aa14.88□□□□□ -0.03
COL1A1-209ENST00000495677 PRMT7Q9NVM4 692 aaPredicted RBP14.88□□□□□ -0.03
COL1A1-209ENST00000495677 SNX14Q9Y5W7 946 aa14.88□□□□□ -0.03
COL1A1-209ENST00000495677 SDK1Q7Z5N4 2213 aa14.88□□□□□ -0.03
COL1A1-209ENST00000495677 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.87□□□□□ -0.03
COL1A1-209ENST00000495677 ABLIM3O94929 683 aa14.87□□□□□ -0.03
COL1A1-209ENST00000495677 PAPSS2O95340 614 aaPredicted RBP14.87□□□□□ -0.03
COL1A1-209ENST00000495677 BAG4O95429 457 aaKnown RBP14.87□□□□□ -0.03
COL1A1-209ENST00000495677 FCARP24071 287 aa14.87□□□□□ -0.03
COL1A1-209ENST00000495677 PSMA5P28066 241 aa14.87□□□□□ -0.03
COL1A1-209ENST00000495677 SLC5A9Q2M3M2 681 aa14.87□□□□□ -0.03
COL1A1-209ENST00000495677 PRSS36Q5K4E3 855 aa14.87□□□□□ -0.03
COL1A1-209ENST00000495677 ANKS3Q6ZW76 656 aa14.87□□□□□ -0.03
COL1A1-209ENST00000495677 TPH2Q8IWU9 490 aa14.87□□□□□ -0.03
COL1A1-209ENST00000495677 ING5Q8WYH8 240 aa14.87□□□□□ -0.03
COL1A1-209ENST00000495677 FAM3CQ92520 227 aa14.87□□□□□ -0.03
COL1A1-209ENST00000495677 ZNF274Q96GC6 653 aaPredicted RBP14.87□□□□□ -0.03
COL1A1-209ENST00000495677 TRMT61BQ9BVS5 477 aaKnown RBP14.87□□□□□ -0.03
COL1A1-209ENST00000495677 BRD9Q9H8M2 597 aa14.87□□□□□ -0.03
COL1A1-209ENST00000495677 LMAN1LQ9HAT1 526 aa14.87□□□□□ -0.03
COL1A1-209ENST00000495677 ZNF334Q9HCZ1 680 aaPredicted RBP14.87□□□□□ -0.03
COL1A1-209ENST00000495677 EML5Q05BV3 1969 aa14.87□□□□□ -0.03
COL1A1-209ENST00000495677 KIF26AQ9ULI4 1882 aaPredicted RBP14.86□□□□□ -0.03
COL1A1-209ENST00000495677 CCDC194A0A1B0GVG4 234 aa14.86□□□□□ -0.03
COL1A1-209ENST00000495677 ZNF197O14709 1029 aa14.86□□□□□ -0.03
COL1A1-209ENST00000495677 CCNT1O60563 726 aaKnown RBP14.86□□□□□ -0.03
COL1A1-209ENST00000495677 CHRNB1P11230 501 aa14.86□□□□□ -0.03
COL1A1-209ENST00000495677 CXCL12P48061 93 aa14.86□□□□□ -0.03
COL1A1-209ENST00000495677 RARRES1P49788 294 aa14.86□□□□□ -0.03
COL1A1-209ENST00000495677 LIMK1P53667 647 aa14.86□□□□□ -0.03
COL1A1-209ENST00000495677 SHC2P98077 582 aa14.86□□□□□ -0.03
COL1A1-209ENST00000495677 CYP4A11Q02928 519 aa14.86□□□□□ -0.03
COL1A1-209ENST00000495677 CDCA2Q69YH5 1023 aaPredicted RBP14.86□□□□□ -0.03
COL1A1-209ENST00000495677 NCAPH2Q6IBW4 605 aa14.86□□□□□ -0.03
COL1A1-209ENST00000495677 SLC8B1Q6J4K2 584 aa14.86□□□□□ -0.03
COL1A1-209ENST00000495677 C1orf228Q6PIY5 440 aa14.86□□□□□ -0.03
COL1A1-209ENST00000495677 ASB16Q96NS5 453 aa14.86□□□□□ -0.03
COL1A1-209ENST00000495677 EIF2AK1Q9BQI3 630 aaKnown RBP14.86□□□□□ -0.03
COL1A1-209ENST00000495677 NDRG2Q9UN36 371 aaKnown RBP14.86□□□□□ -0.03
COL1A1-209ENST00000495677 CDY1Q9Y6F8 540 aa14.86□□□□□ -0.03
COL1A1-209ENST00000495677 NUP210Q8TEM1 1887 aaPredicted RBP14.85□□□□□ -0.03
COL1A1-209ENST00000495677 TM4SF5O14894 197 aa14.85□□□□□ -0.03
COL1A1-209ENST00000495677 N4BP3O15049 544 aa14.85□□□□□ -0.03
COL1A1-209ENST00000495677 HRO43593 1189 aa14.85□□□□□ -0.03
COL1A1-209ENST00000495677 TRAPPC3O43617 180 aa14.85□□□□□ -0.03
COL1A1-209ENST00000495677 RECQL4O94761 1208 aa14.85□□□□□ -0.03
COL1A1-209ENST00000495677 PSMC3P17980 439 aa14.85□□□□□ -0.03
COL1A1-209ENST00000495677 PMLP29590 882 aa14.85□□□□□ -0.03
COL1A1-209ENST00000495677 HOXA6P31267 233 aa14.85□□□□□ -0.03
COL1A1-209ENST00000495677 SIM2Q14190 667 aaPredicted RBP14.85□□□□□ -0.03
COL1A1-209ENST00000495677 CD300LGQ6UXG3 332 aa14.85□□□□□ -0.03
COL1A1-209ENST00000495677 SPEM1Q8N4L4 309 aa14.85□□□□□ -0.03
COL1A1-209ENST00000495677 DEPDC1BQ8WUY9 529 aa14.85□□□□□ -0.03
COL1A1-209ENST00000495677 MSANTD3Q96H12 275 aa14.85□□□□□ -0.03
COL1A1-209ENST00000495677 TRPV4Q9HBA0 871 aa14.85□□□□□ -0.03
COL1A1-209ENST00000495677 SNTG2Q9NY99 539 aa14.85□□□□□ -0.03
COL1A1-209ENST00000495677 ANGPTL2Q9UKU9 493 aa14.85□□□□□ -0.03
COL1A1-209ENST00000495677 FAM208BQ5VWN6 2430 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 CPLX1O14810 134 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 MARCH6O60337 910 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 B3GAT3O94766 335 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 LRG1P02750 347 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 ATF2P15336 505 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 CEBPBP17676 345 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 TOB2Q14106 344 aaPredicted RBP14.84□□□□□ -0.03
COL1A1-209ENST00000495677 GAS6Q14393 721 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 LPAL2Q16609 132 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 UPP1Q16831 310 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 FAM78AQ5JUQ0 283 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 CPLX2Q6PUV4 134 aaKnown RBP14.84□□□□□ -0.03
COL1A1-209ENST00000495677 PRR23BQ6ZRT6 265 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 LONP2Q86WA8 852 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 POTEDQ86YR6 584 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 TCEAL8Q8IYN2 117 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 DDX27Q96GQ7 796 aaKnown RBP14.84□□□□□ -0.03
COL1A1-209ENST00000495677 UROC1Q96N76 676 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 PPP1R10Q96QC0 940 aaKnown RBP14.84□□□□□ -0.03
COL1A1-209ENST00000495677 ADPGKQ9BRR6 497 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 POLR3FQ9H1D9 316 aaPredicted RBP14.84□□□□□ -0.03
COL1A1-209ENST00000495677 CXCL16Q9H2A7 254 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 PDZD7Q9H5P4 517 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 PCDHA12Q9UN75 941 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 ATG2BQ96BY7 2078 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 DENND4CQ5VZ89 1909 aa14.84□□□□□ -0.03
COL1A1-209ENST00000495677 ACKR2O00590 384 aa14.83□□□□□ -0.04
COL1A1-209ENST00000495677 GDF9O60383 454 aa14.83□□□□□ -0.04
COL1A1-209ENST00000495677 CDC45O75419 566 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms