RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 KIF20AO95235 890 aa21.12■□□□□ 0.97
HDAC4-212ENST00000495497 BMP6P22004 513 aa21.12■□□□□ 0.97
HDAC4-212ENST00000495497 CLCNKBP51801 687 aa21.12■□□□□ 0.97
HDAC4-212ENST00000495497 GUCY2FP51841 1108 aa21.12■□□□□ 0.97
HDAC4-212ENST00000495497 ERVFC1P60507 584 aa21.12■□□□□ 0.97
HDAC4-212ENST00000495497 KRT17Q04695 432 aa21.12■□□□□ 0.97
HDAC4-212ENST00000495497 CCDC85BQ15834 202 aaPredicted RBP21.12■□□□□ 0.97
HDAC4-212ENST00000495497 HASPINQ8TF76 798 aa21.12■□□□□ 0.97
HDAC4-212ENST00000495497 NFICP08651 508 aa21.11■□□□□ 0.97
HDAC4-212ENST00000495497 MCM4P33991 863 aa21.11■□□□□ 0.97
HDAC4-212ENST00000495497 SNRPFP62306 86 aaKnown RBP21.11■□□□□ 0.97
HDAC4-212ENST00000495497 MORC3Q14149 939 aa21.11■□□□□ 0.97
HDAC4-212ENST00000495497 HSP90AA2PQ14568 343 aaPredicted RBP21.11■□□□□ 0.97
HDAC4-212ENST00000495497 TAS1R1Q7RTX1 841 aa21.11■□□□□ 0.97
HDAC4-212ENST00000495497 BRSK2Q8IWQ3 736 aa21.11■□□□□ 0.97
HDAC4-212ENST00000495497 PPM1EQ8WY54 764 aa21.11■□□□□ 0.97
HDAC4-212ENST00000495497 MRPL38Q96DV4 380 aaKnown RBP21.11■□□□□ 0.97
HDAC4-212ENST00000495497 FAM84AQ96KN4 292 aa21.11■□□□□ 0.97
HDAC4-212ENST00000495497 COLEC11Q9BWP8 271 aa21.11■□□□□ 0.97
HDAC4-212ENST00000495497 SLC38A7Q9NVC3 462 aa21.11■□□□□ 0.97
HDAC4-212ENST00000495497 RBAKQ9NYW8 714 aaPredicted RBP21.11■□□□□ 0.97
HDAC4-212ENST00000495497 KIAA1468Q9P260 1216 aa21.11■□□□□ 0.97
HDAC4-212ENST00000495497 CGNQ9P2M7 1197 aaKnown RBP21.11■□□□□ 0.97
HDAC4-212ENST00000495497 KIAA0391O15091 583 aaKnown RBP21.1■□□□□ 0.97
HDAC4-212ENST00000495497 KIF4AO95239 1232 aa21.1■□□□□ 0.97
HDAC4-212ENST00000495497 CD44P16070 742 aaKnown RBP21.1■□□□□ 0.97
HDAC4-212ENST00000495497 POU3F3P20264 500 aaPredicted RBP21.1■□□□□ 0.97
HDAC4-212ENST00000495497 UBE3AQ05086 875 aa21.1■□□□□ 0.97
HDAC4-212ENST00000495497 ZBTB6Q15916 424 aa21.1■□□□□ 0.97
HDAC4-212ENST00000495497 PTPROQ16827 1216 aa21.1■□□□□ 0.97
HDAC4-212ENST00000495497 CD302Q8IX05 232 aa21.1■□□□□ 0.97
HDAC4-212ENST00000495497 C12orf56Q8IXR9 622 aa21.1■□□□□ 0.97
HDAC4-212ENST00000495497 XXYLT1Q8NBI6 393 aa21.1■□□□□ 0.97
HDAC4-212ENST00000495497 GOLGA5Q8TBA6 731 aa21.1■□□□□ 0.97
HDAC4-212ENST00000495497 LMAN2LQ9H0V9 348 aa21.1■□□□□ 0.97
HDAC4-212ENST00000495497 NUP62CLQ9H1M0 184 aa21.1■□□□□ 0.97
HDAC4-212ENST00000495497 PDE11AQ9HCR9 933 aa21.1■□□□□ 0.97
HDAC4-212ENST00000495497 TLR9Q9NR96 1032 aa21.1■□□□□ 0.97
HDAC4-212ENST00000495497 PUF60Q9UHX1 559 aaKnown RBP21.1■□□□□ 0.97
HDAC4-212ENST00000495497 MYO9BQ13459 2157 aa21.1■□□□□ 0.97
HDAC4-212ENST00000495497 TDRD15B5MCY1 1934 aaKnown RBP21.1■□□□□ 0.97
HDAC4-212ENST00000495497 ZNF233A6NK53 670 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 PODXLO00592 558 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 CALUO43852 315 aaPredicted RBP21.09■□□□□ 0.97
HDAC4-212ENST00000495497 TADA2AO75478 443 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 IL18RAPO95256 599 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 NR3C1P04150 777 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 TMEM132DQ14C87 1099 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 SNRNP35Q16560 246 aaKnown RBP21.09■□□□□ 0.97
HDAC4-212ENST00000495497 UPP1Q16831 310 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 PLPP4Q5VZY2 271 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 LMBRD2Q68DH5 695 aaPredicted RBP21.09■□□□□ 0.97
HDAC4-212ENST00000495497 CD300LGQ6UXG3 332 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 DDX53Q86TM3 631 aaKnown RBP21.09■□□□□ 0.97
HDAC4-212ENST00000495497 EFCAB13Q8IY85 973 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 ADSSL1Q8N142 457 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 VPS52Q8N1B4 723 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 C3orf58Q8NDZ4 430 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 MICAL1Q8TDZ2 1067 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 AUTS2Q8WXX7 1259 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 FBXL18Q96ME1 805 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 ASB7Q9H672 318 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 DMAC2Q9NW81 257 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 LMCD1Q9NZU5 365 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 ADAM28Q9UKQ2 775 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 UBQLN1Q9UMX0 589 aaKnown RBP21.09■□□□□ 0.97
HDAC4-212ENST00000495497 TRAF3IP3Q9Y228 551 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 LZTS1Q9Y250 596 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 STXBP5LQ9Y2K9 1186 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 PLXNA4Q9HCM2 1894 aa21.09■□□□□ 0.97
HDAC4-212ENST00000495497 TRIP11Q15643 1979 aa21.08■□□□□ 0.97
HDAC4-212ENST00000495497 CARNS1A5YM72 827 aa21.08■□□□□ 0.97
HDAC4-212ENST00000495497 FSCN2O14926 492 aa21.08■□□□□ 0.97
HDAC4-212ENST00000495497 EXOC3O60645 756 aa21.08■□□□□ 0.97
HDAC4-212ENST00000495497 CASP4P49662 377 aa21.08■□□□□ 0.97
HDAC4-212ENST00000495497 POU5F1Q01860 360 aaKnown RBP21.08■□□□□ 0.97
HDAC4-212ENST00000495497 COBLL1Q53SF7 1204 aa21.08■□□□□ 0.97
HDAC4-212ENST00000495497 TMC7Q7Z402 723 aa21.08■□□□□ 0.97
HDAC4-212ENST00000495497 B3GALT6Q96L58 329 aa21.08■□□□□ 0.97
HDAC4-212ENST00000495497 UROC1Q96N76 676 aa21.08■□□□□ 0.97
HDAC4-212ENST00000495497 TCF25Q9BQ70 676 aa21.08■□□□□ 0.97
HDAC4-212ENST00000495497 GPR62Q9BZJ7 368 aa21.08■□□□□ 0.97
HDAC4-212ENST00000495497 ENTPD7Q9NQZ7 604 aa21.08■□□□□ 0.97
HDAC4-212ENST00000495497 PPP1R3GB7ZBB8 358 aa21.07■□□□□ 0.96
HDAC4-212ENST00000495497 PPEF2O14830 753 aa21.07■□□□□ 0.96
HDAC4-212ENST00000495497 B3GAT3O94766 335 aa21.07■□□□□ 0.96
HDAC4-212ENST00000495497 CA8P35219 290 aa21.07■□□□□ 0.96
HDAC4-212ENST00000495497 PMS1P54277 932 aaKnown RBP21.07■□□□□ 0.96
HDAC4-212ENST00000495497 ZCWPW2Q504Y3 356 aa21.07■□□□□ 0.96
HDAC4-212ENST00000495497 SPATA1Q5VX52 437 aa21.07■□□□□ 0.96
HDAC4-212ENST00000495497 FUT10Q6P4F1 479 aa21.07■□□□□ 0.96
HDAC4-212ENST00000495497 DCLRE1AQ6PJP8 1040 aa21.07■□□□□ 0.96
HDAC4-212ENST00000495497 ADGRD2Q7Z7M1 963 aa21.07■□□□□ 0.96
HDAC4-212ENST00000495497 BEST2Q8NFU1 509 aa21.07■□□□□ 0.96
HDAC4-212ENST00000495497 ZBP1Q9H171 429 aa21.07■□□□□ 0.96
HDAC4-212ENST00000495497 KIAA1586Q9HCI6 787 aa21.07■□□□□ 0.96
HDAC4-212ENST00000495497 DERAQ9Y315 318 aa21.07■□□□□ 0.96
HDAC4-212ENST00000495497 CITO14578 2027 aa21.07■□□□□ 0.96
HDAC4-212ENST00000495497 TRANK1O15050 2925 aa21.07■□□□□ 0.96
HDAC4-212ENST00000495497 TRIM49BA6NDI0 452 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms