RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 STYXL1Q9Y6J8 313 aa11.17□□□□□ -0.62
SAMM50-206ENST00000494795 DOCK3Q8IZD9 2030 aa11.17□□□□□ -0.62
SAMM50-206ENST00000494795 ABLIM1O14639 778 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 P4HA2O15460 535 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 VTNP04004 478 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 CD58P19256 250 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 DMTNQ08495 405 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 PSMD6Q15008 389 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 TMEM270Q6UE05 265 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 SCARA5Q6ZMJ2 495 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 RPGRIP1Q96KN7 1286 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 NUP85Q9BW27 656 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 KRIT1O00522 736 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 ACO1P21399 889 aaKnown RBP11.16□□□□□ -0.62
SAMM50-206ENST00000494795 TAPT1Q6NXT6 567 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 ZNF653Q96CK0 615 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 CPB2Q96IY4 423 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 FAM118BQ9BPY3 351 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 CCDC113Q9H0I3 377 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 SUCLA2Q9P2R7 463 aaPredicted RBP11.16□□□□□ -0.62
SAMM50-206ENST00000494795 ADAM21Q9UKJ8 722 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 AMFRQ9UKV5 643 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 A0A0A6YYK5 440 aaPredicted RBP11.16□□□□□ -0.62
SAMM50-206ENST00000494795 INO80B-WBP1J3KQ70 363 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 CLDN3O15551 220 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 MYL6P60660 151 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 TMEM62Q0P6H9 643 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 EFCAB12Q6NXP0 572 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 EFCAB13Q8IY85 973 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 AFAP1L1Q8TED9 768 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 AFG1LQ8WV93 481 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 RNPC3Q96LT9 517 aaKnown RBP11.16□□□□□ -0.62
SAMM50-206ENST00000494795 INO80BQ9C086 356 aaPredicted RBP11.16□□□□□ -0.62
SAMM50-206ENST00000494795 NRBP2Q9NSY0 501 aa11.16□□□□□ -0.62
SAMM50-206ENST00000494795 ATP8B1O43520 1251 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 DKC1O60832 514 aaKnown RBP eCLIP11.15□□□□□ -0.62
SAMM50-206ENST00000494795 WEE2P0C1S8 567 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 PYGMP11217 842 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 RRM1P23921 792 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 MCCD1P59942 119 aaPredicted RBP11.15□□□□□ -0.62
SAMM50-206ENST00000494795 GPC5P78333 572 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 CDR2Q01850 454 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 HVCN1Q96D96 273 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.15□□□□□ -0.62
SAMM50-206ENST00000494795 DPH5Q9H2P9 285 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 GDF3Q9NR23 364 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 CCL15-CCL14A0A0B4J2E2 113 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 RTN2O75298 545 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 KRT14P02533 472 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 INSRRP14616 1297 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 TCF4P15884 667 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 BRD2P25440 801 aaKnown RBP11.15□□□□□ -0.62
SAMM50-206ENST00000494795 RAP1GAPP47736 663 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 PDE6CP51160 858 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 CLDN10P78369 228 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 ITIH3Q06033 890 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 ARHGAP1Q07960 439 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 CCL15Q16663 113 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 ZNF771Q7L3S4 317 aaPredicted RBP11.15□□□□□ -0.62
SAMM50-206ENST00000494795 ANKS1BQ7Z6G8 1248 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 OR2W6PQ8NHA6 318 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 ATP8B4Q8TF62 1192 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 C18orf8Q96DM3 657 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 ACO2Q99798 780 aaKnown RBP11.15□□□□□ -0.62
SAMM50-206ENST00000494795 TJP2Q9UDY2 1190 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 INTUQ9ULD6 942 aa11.15□□□□□ -0.62
SAMM50-206ENST00000494795 PGRMC1O00264 195 aaKnown RBP11.14□□□□□ -0.63
SAMM50-206ENST00000494795 DAPK3O43293 454 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 SLC25A27O95847 323 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 SNAI1O95863 264 aaPredicted RBP11.14□□□□□ -0.63
SAMM50-206ENST00000494795 PRKCBP05771 671 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 TGFB3P10600 412 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 SNAPC2Q13487 334 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 ARMC9Q7Z3E5 817 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 ZNF564Q8TBZ8 553 aaPredicted RBP11.14□□□□□ -0.63
SAMM50-206ENST00000494795 ACTRT1Q8TDG2 376 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 PIK3R5Q8WYR1 880 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 ARL8AQ96BM9 186 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 TSKSQ9UJT2 592 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 CXCL8P10145 99 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 OSBPP22059 807 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 KCNJ1P48048 391 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 SNRPFP62306 86 aaKnown RBP11.14□□□□□ -0.63
SAMM50-206ENST00000494795 NOP14P78316 857 aaKnown RBP11.14□□□□□ -0.63
SAMM50-206ENST00000494795 DNAJC21Q5F1R6 531 aaKnown RBP11.14□□□□□ -0.63
SAMM50-206ENST00000494795 FAM160B1Q5W0V3 765 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 TTC19Q6DKK2 380 aaPredicted RBP11.14□□□□□ -0.63
SAMM50-206ENST00000494795 TXLNBQ8N3L3 684 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 RASGEF1CQ8N431 466 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 RABEP2Q9H5N1 569 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 IFT122Q9HBG6 1241 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 C1orf112Q9NSG2 853 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 CNOT8Q9UFF9 292 aaKnown RBP11.14□□□□□ -0.63
SAMM50-206ENST00000494795 POLIQ9UNA4 740 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 A0A087WZ62 844 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 IGKV6-21A0A0C4DH24 114 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 GPR25O00155 361 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 PMM2O15305 246 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 RNF40O75150 1001 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 LGR5O75473 907 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms