RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 TARDBPQ13148 414 aaKnown RBP eCLIP3.51□□□□□ -1.85
LRIF1-203ENST00000494675 FHL2Q14192 279 aa3.51□□□□□ -1.85
LRIF1-203ENST00000494675 HLTFQ14527 1009 aaKnown RBP eCLIP3.51□□□□□ -1.853e-6■■□□□ 11.6
LRIF1-203ENST00000494675 GBX1Q14549 363 aa3.51□□□□□ -1.85
LRIF1-203ENST00000494675 GRM3Q14832 879 aa3.51□□□□□ -1.85
LRIF1-203ENST00000494675 RAB39AQ14964 217 aa3.51□□□□□ -1.85
LRIF1-203ENST00000494675 ATP2B3Q16720 1220 aa3.51□□□□□ -1.85
LRIF1-203ENST00000494675 FAM111BQ6SJ93 734 aa3.51□□□□□ -1.85
LRIF1-203ENST00000494675 ZNF572Q7Z3I7 529 aaPredicted RBP3.51□□□□□ -1.85
LRIF1-203ENST00000494675 ZGPATQ8N5A5 531 aaKnown RBP3.51□□□□□ -1.85
LRIF1-203ENST00000494675 C3orf20Q8ND61 904 aa3.51□□□□□ -1.85
LRIF1-203ENST00000494675 NSUN6Q8TEA1 469 aaKnown RBP3.51□□□□□ -1.85
LRIF1-203ENST00000494675 FAM89AQ96GI7 184 aa3.51□□□□□ -1.85
LRIF1-203ENST00000494675 CGRRF1Q99675 332 aa3.51□□□□□ -1.85
LRIF1-203ENST00000494675 HDAC5Q9UQL6 1122 aa3.51□□□□□ -1.85
LRIF1-203ENST00000494675 RUVBL1Q9Y265 456 aaKnown RBP3.51□□□□□ -1.85
LRIF1-203ENST00000494675 LRRC14BA6NHZ5 514 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 NPIPB8E9PQR5 432 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 TEX33O43247 280 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 RAD17O75943 681 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 RAP2AP10114 183 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 ALOX15P16050 662 aaPredicted RBP3.5□□□□□ -1.85
LRIF1-203ENST00000494675 FPR1P21462 350 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 SMARCA1P28370 1054 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 PCSK1P29120 753 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 FLT3LGP49771 235 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 MAP2K6P52564 334 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 CREMQ03060 361 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 PTH1RQ03431 593 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 SP140Q13342 867 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 MRPL49Q13405 166 aaKnown RBP3.5□□□□□ -1.85
LRIF1-203ENST00000494675 LLGL1Q15334 1064 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 KHDC1Q4VXA5 237 aaKnown RBP3.5□□□□□ -1.85
LRIF1-203ENST00000494675 FAM47AQ5JRC9 791 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 FKBP15Q5T1M5 1219 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 AFMIDQ63HM1 303 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 RNF207Q6ZRF8 634 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 POLNQ7Z5Q5 900 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 DAAM2Q86T65 1068 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 FUKQ8N0W3 1084 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 PPP1R35Q8TAP8 253 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 CASKIN2Q8WXE0 1202 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 TIFAQ96CG3 184 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 CEP95Q96GE4 821 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 CDK5RAP3Q96JB5 506 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 ZNF512Q96ME7 567 aaPredicted RBP3.5□□□□□ -1.85
LRIF1-203ENST00000494675 ENKD1Q9H0I2 346 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 PLA2G3Q9NZ20 509 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 DDX20Q9UHI6 824 aaKnown RBP3.5□□□□□ -1.85
LRIF1-203ENST00000494675 PCDHA3Q9Y5H8 950 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 NR2E3Q9Y5X4 410 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 ACTL7AQ9Y615 435 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 H3BUI4 141 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 STC2O76061 302 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 UBXN7O94888 489 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 ARIH2O95376 493 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 GNAT2P19087 354 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 COMTP21964 271 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 HTR1BP28222 390 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 MCM7P33993 719 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 IL12RB1P42701 662 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 ALDH1A3P47895 512 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 ZNF280AP59817 542 aaPredicted RBP3.5□□□□□ -1.85
LRIF1-203ENST00000494675 NOGQ13253 232 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 MTM1Q13496 603 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 FAM214AQ32MH5 1076 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 MIIPQ5JXC2 388 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 MFSD14BQ5SR56 506 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 MFSD5Q6N075 450 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 KSR2Q6VAB6 950 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 CCDC146Q8IYE0 955 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 SH2D3CQ8N5H7 860 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 KLHDC4Q8TBB5 520 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 IFI44Q8TCB0 444 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 EDAQ92838 391 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 MRGPRX4Q96LA9 322 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 DMRTA2Q96SC8 542 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 CALCOCO1Q9P1Z2 691 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 STXBP5LQ9Y2K9 1186 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 SLC30A1Q9Y6M5 507 aa3.5□□□□□ -1.85
LRIF1-203ENST00000494675 WDR33Q9C0J8 1336 aaKnown RBP3.49□□□□□ -1.85
LRIF1-203ENST00000494675 B5MCH6 92 aa3.49□□□□□ -1.85
LRIF1-203ENST00000494675 FAM227AF5H4B4 570 aa3.49□□□□□ -1.85
LRIF1-203ENST00000494675 B3GALT2O43825 422 aa3.49□□□□□ -1.85
LRIF1-203ENST00000494675 TUSC2O75896 110 aa3.49□□□□□ -1.85
LRIF1-203ENST00000494675 ZNF202O95125 648 aa3.49□□□□□ -1.85
LRIF1-203ENST00000494675 MYL1P05976 194 aa3.49□□□□□ -1.85
LRIF1-203ENST00000494675 ATP5JP18859 108 aa3.49□□□□□ -1.85
LRIF1-203ENST00000494675 HK3P52790 923 aa3.49□□□□□ -1.85
LRIF1-203ENST00000494675 CTXN1P60606 82 aa3.49□□□□□ -1.85
LRIF1-203ENST00000494675 ATP8B2P98198 1209 aa3.49□□□□□ -1.85
LRIF1-203ENST00000494675 HHEXQ03014 270 aa3.49□□□□□ -1.85
LRIF1-203ENST00000494675 TLE1Q04724 770 aa3.49□□□□□ -1.85
LRIF1-203ENST00000494675 LSM12Q3MHD2 195 aaKnown RBP3.49□□□□□ -1.85
LRIF1-203ENST00000494675 USP39Q53GS9 565 aaKnown RBP3.49□□□□□ -1.85
LRIF1-203ENST00000494675 CCSAPQ6IQ19 270 aaPredicted RBP3.49□□□□□ -1.85
LRIF1-203ENST00000494675 CCDC149Q6ZUS6 474 aa3.49□□□□□ -1.85
LRIF1-203ENST00000494675 OVCH2Q7RTZ1 564 aa3.49□□□□□ -1.85
LRIF1-203ENST00000494675 HEATR3Q7Z4Q2 680 aa3.49□□□□□ -1.85
LRIF1-203ENST00000494675 SRGAP1Q7Z6B7 1085 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms