RNA–Protein interactions for RNA: ENST00000494669.2

FGD3-208, Transcript of FYVE, RhoGEF and PH domain containing 3, human

TSL 3

Gene FGD3, Length 915 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGD3-208	ENST00000494669	CHAMP1	Q96JM3	812 aa		13.65	□□□□□ -0.22
FGD3-208	ENST00000494669	FIZ1	Q96SL8	496 aa		13.65	□□□□□ -0.22
FGD3-208	ENST00000494669	C2orf40	Q9H1Z8	148 aa		13.65	□□□□□ -0.22
FGD3-208	ENST00000494669	PDZD7	Q9H5P4	517 aa		13.65	□□□□□ -0.22
FGD3-208	ENST00000494669	TMEM134	Q9H6X4	195 aa		13.65	□□□□□ -0.22
FGD3-208	ENST00000494669	TBC1D17	Q9HA65	648 aa		13.65	□□□□□ -0.22
FGD3-208	ENST00000494669	C17orf75	Q9HAS0	396 aa		13.65	□□□□□ -0.22
FGD3-208	ENST00000494669	RXFP1	Q9HBX9	757 aa		13.65	□□□□□ -0.22
FGD3-208	ENST00000494669	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.65	□□□□□ -0.22
FGD3-208	ENST00000494669	KCND2	Q9NZV8	630 aa		13.65	□□□□□ -0.22
FGD3-208	ENST00000494669	DPP7	Q9UHL4	492 aa		13.65	□□□□□ -0.22
FGD3-208	ENST00000494669		R4GN57	208 aa		13.65	□□□□□ -0.22
FGD3-208	ENST00000494669	NCOR2	Q9Y618	2525 aa		13.65	□□□□□ -0.22
FGD3-208	ENST00000494669	ABLIM1	O14639	778 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	SPTLC2	O15270	562 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	SRF	P11831	508 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	LIG1	P18858	919 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	ZNF131	P52739	623 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	DSG1	Q02413	1049 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	DNM1	Q05193	864 aa	Known RBP	13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	RAD51AP2	Q09MP3	1159 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	DHX8	Q14562	1220 aa	Known RBP	13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	EEF1DP3	Q658K8	133 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	SHC4	Q6S5L8	630 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	CYP26C1	Q6V0L0	522 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	GET4	Q7L5D6	327 aa	Predicted RBP	13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	TMEM161B	Q8NDZ6	487 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	GPR152	Q8TDT2	470 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	SPIRE2	Q8WWL2	714 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	RABGGTA	Q92696	567 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	ZNF396	Q96N95	335 aa	Predicted RBP	13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	NXF3	Q9H4D5	531 aa	Known RBP	13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	PIDD1	Q9HB75	910 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	PTPRH	Q9HD43	1115 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	RCOR1	Q9UKL0	485 aa		13.64	□□□□□ -0.23
FGD3-208	ENST00000494669	EPG5	Q9HCE0	2579 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	TGM5	O43548	720 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	PRKCB	P05771	671 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	DCN	P07585	359 aa	Known RBP	13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	PLS3	P13797	630 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	RPL17	P18621	184 aa	Known RBP	13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	AKAP5	P24588	427 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	EFNA5	P52803	228 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	CACNB1	Q02641	598 aa	Predicted RBP	13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	STK38	Q15208	465 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	E2F4	Q16254	413 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	MAPK6	Q16659	721 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	ATL3	Q6DD88	541 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	SLC27A1	Q6PCB7	646 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	ZBTB8OS	Q8IWT0	167 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	DEPTOR	Q8TB45	409 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	LARP4B	Q92615	738 aa	Known RBP	13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	IFT74	Q96LB3	600 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	DRC1	Q96MC2	740 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	REEP2	Q9BRK0	252 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	RHOBTB2	Q9BYZ6	727 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	GPR62	Q9BZJ7	368 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	CXCL16	Q9H2A7	254 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	CHST7	Q9NS84	486 aa		13.63	□□□□□ -0.23
FGD3-208	ENST00000494669	SLC16A4	O15374	487 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	NR1I2	O75469	434 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	KRT37	O76014	449 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	NPTXR	O95502	500 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	LMNA	P02545	664 aa	Known RBP	13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	LAMP2	P13473	410 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	PROZ	P22891	400 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	NCKAP1L	P55160	1127 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	PRPF4B	Q13523	1007 aa	Known RBP	13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	BECN1	Q14457	450 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	FUT10	Q6P4F1	479 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	GPBP1	Q86WP2	473 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	HDAC7	Q8WUI4	952 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	DNAJC19	Q96DA6	116 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	ACO2	Q99798	780 aa	Known RBP	13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	COLEC11	Q9BWP8	271 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	TRIM6	Q9C030	488 aa	Predicted RBP	13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	PLEKHA4	Q9H4M7	779 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	ARHGEF3	Q9NR81	526 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	CACNG4	Q9UBN1	327 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	STK17A	Q9UEE5	414 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	ODF2L	Q9ULJ1	636 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	PCDHA7	Q9UN72	937 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	NUMBL	Q9Y6R0	609 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	EP300	Q09472	2414 aa	Predicted RBP	13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	PHLPP2	Q6ZVD8	1323 aa		13.62	□□□□□ -0.23
FGD3-208	ENST00000494669	PDCD11	Q14690	1871 aa	Known RBP	13.61	□□□□□ -0.23
FGD3-208	ENST00000494669	MYMK	A6NI61	221 aa		13.61	□□□□□ -0.23
FGD3-208	ENST00000494669	CCDC169	A6NNP5	214 aa		13.61	□□□□□ -0.23
FGD3-208	ENST00000494669		K7ERI5	159 aa		13.61	□□□□□ -0.23
FGD3-208	ENST00000494669	CUTA	O60888	179 aa		13.61	□□□□□ -0.23
FGD3-208	ENST00000494669	MAPT	P10636	758 aa	Known RBP	13.61	□□□□□ -0.23
FGD3-208	ENST00000494669	NCBP1	Q09161	790 aa	Known RBP	13.61	□□□□□ -0.23
FGD3-208	ENST00000494669	DMP1	Q13316	513 aa	Predicted RBP	13.61	□□□□□ -0.23
FGD3-208	ENST00000494669	HTR4	Q13639	388 aa		13.61	□□□□□ -0.23
FGD3-208	ENST00000494669	USP41	Q3LFD5	358 aa		13.61	□□□□□ -0.23
FGD3-208	ENST00000494669	LILRA6	Q6PI73	481 aa		13.61	□□□□□ -0.23
FGD3-208	ENST00000494669	KIAA2013	Q8IYS2	634 aa		13.61	□□□□□ -0.23
FGD3-208	ENST00000494669	NXPE3	Q969Y0	559 aa		13.61	□□□□□ -0.23
FGD3-208	ENST00000494669	PANK2	Q9BZ23	570 aa		13.61	□□□□□ -0.23
FGD3-208	ENST00000494669	PRKD2	Q9BZL6	878 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms