RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 PSPC1Q8WXF1 523 aaKnown RBP11.99□□□□□ -0.49
CHMP3-209ENST00000494623 C12orf42Q96LP6 360 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 CCT8L2Q96SF2 557 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 SMIM23A6NLE4 172 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 C4BPAP04003 597 aaKnown RBP11.99□□□□□ -0.49
CHMP3-209ENST00000494623 UNGP13051 313 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-209ENST00000494623 RRM1P23921 792 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 MAGEA9P43362 315 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 PSMD6Q15008 389 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 SEZ6Q53EL9 994 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 ZBTB41Q5SVQ8 909 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 TDRD10Q5VZ19 366 aaKnown RBP11.99□□□□□ -0.49
CHMP3-209ENST00000494623 C15orf39Q6ZRI6 1047 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 MCOLN2Q8IZK6 566 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 ZNF473Q8WTR7 871 aaKnown RBP11.99□□□□□ -0.49
CHMP3-209ENST00000494623 RNF25Q96BH1 459 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-209ENST00000494623 KLRG1Q96E93 195 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 CYFIP2Q96F07 1278 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 TARS2Q9BW92 718 aaKnown RBP11.99□□□□□ -0.49
CHMP3-209ENST00000494623 HAPLN2Q9GZV7 340 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 PABPC3Q9H361 631 aaKnown RBP11.99□□□□□ -0.49
CHMP3-209ENST00000494623 KIAA1586Q9HCI6 787 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 ANKFY1Q9P2R3 1169 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 SPDYE16A6NNV3 312 aaPredicted RBP11.98□□□□□ -0.49
CHMP3-209ENST00000494623 H0YCG3 227 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 FZD9O00144 591 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 ZC3H11AO75152 810 aaKnown RBP eCLIP11.98□□□□□ -0.49
CHMP3-209ENST00000494623 CAND2O75155 1236 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 HARSP12081 509 aaKnown RBP11.98□□□□□ -0.49
CHMP3-209ENST00000494623 GLRA2P23416 452 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 BRD2P25440 801 aaKnown RBP11.98□□□□□ -0.49
CHMP3-209ENST00000494623 SLC29A2Q14542 456 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 SIX1Q15475 284 aaPredicted RBP11.98□□□□□ -0.49
CHMP3-209ENST00000494623 ZACNQ401N2 412 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 DAB2IPQ5VWQ8 1189 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 DENND2CQ68D51 928 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 PASD1Q8IV76 773 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 TRPM4Q8TD43 1214 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 EPB41L4BQ9H329 900 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 SEMA4AQ9H3S1 761 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 PCDHB2Q9Y5E7 798 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 DOCK5Q9H7D0 1870 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 PTPRJQ12913 1337 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 STAM2O75886 525 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 OATP04181 439 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 CFHP08603 1231 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 EIF3BP55884 814 aaKnown RBP11.98□□□□□ -0.49
CHMP3-209ENST00000494623 PPP1R7Q15435 360 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 UBAP2Q5T6F2 1119 aaKnown RBP11.98□□□□□ -0.49
CHMP3-209ENST00000494623 CRELD2Q6UXH1 353 aaPredicted RBP11.98□□□□□ -0.49
CHMP3-209ENST00000494623 B4GALNT4Q76KP1 1039 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 RBAKQ9NYW8 714 aaPredicted RBP11.98□□□□□ -0.49
CHMP3-209ENST00000494623 MTRF1LQ9UGC7 380 aaKnown RBP11.98□□□□□ -0.49
CHMP3-209ENST00000494623 PCDHB4Q9Y5E5 795 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 KIAA1217Q5T5P2 1943 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 ZNF541Q9H0D2 1346 aa11.98□□□□□ -0.49
CHMP3-209ENST00000494623 COL11A1P12107 1806 aaPredicted RBP11.97□□□□□ -0.49
CHMP3-209ENST00000494623 ATP2A1O14983 1001 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 VNN1O95497 513 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 NSFP46459 744 aaKnown RBP11.97□□□□□ -0.49
CHMP3-209ENST00000494623 CCDC25Q86WR0 208 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 EFCAB13Q8IY85 973 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 MYCBPAPQ8TBZ2 947 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 SLC7A3Q8WY07 619 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 CEP89Q96ST8 783 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 MSTO1Q9BUK6 570 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 PORCNQ9H237 461 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 FBXO40Q9UH90 709 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 SLC12A6Q9UHW9 1150 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 MAFBQ9Y5Q3 323 aaPredicted RBP11.97□□□□□ -0.49
CHMP3-209ENST00000494623 MROH7Q68CQ1 1323 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 MYPNQ86TC9 1320 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 ECEL1O95672 775 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 FGFR4P22455 802 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 BPIFB4P59827 614 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 CYP1B1Q16678 543 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 SGO2Q562F6 1265 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 TMEM270Q6UE05 265 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 DLK2Q6UY11 383 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 APOBEC3FQ8IUX4 373 aaKnown RBP11.97□□□□□ -0.49
CHMP3-209ENST00000494623 MDM1Q8TC05 714 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 APOBEC3GQ9HC16 384 aaKnown RBP11.97□□□□□ -0.49
CHMP3-209ENST00000494623 GGA3Q9NZ52 723 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 PARP2Q9UGN5 583 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 KCNG1Q9UIX4 513 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 AFG3L2Q9Y4W6 797 aa11.97□□□□□ -0.49
CHMP3-209ENST00000494623 GMNCA6NCL1 334 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 LIG3P49916 1009 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 CLDN10P78369 228 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 SPDYCQ5MJ68 293 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 SCARA3Q6AZY7 606 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 HOOK3Q86VS8 718 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 MICALL1Q8N3F8 863 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 ATG4AQ8WYN0 398 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 FAM81BQ96LP2 452 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 C11orf70Q9BRQ4 267 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 PLVAPQ9BX97 442 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 DHX33Q9H6R0 707 aaKnown RBP11.96□□□□□ -0.49
CHMP3-209ENST00000494623 PASKQ96RG2 1323 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 A0A087WUV0 522 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms