RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 AUTS2Q8WXX7 1259 aa25.52■■□□□ 1.68
CLIC3-203ENST00000494426 GPR62Q9BZJ7 368 aa25.52■■□□□ 1.68
CLIC3-203ENST00000494426 ADAM28Q9UKQ2 775 aa25.52■■□□□ 1.68
CLIC3-203ENST00000494426 UBE4BO95155 1302 aa25.52■■□□□ 1.68
CLIC3-203ENST00000494426 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.51■■□□□ 1.67
CLIC3-203ENST00000494426 C2orf71A6NGG8 1288 aa25.51■■□□□ 1.67
CLIC3-203ENST00000494426 KIF4AO95239 1232 aa25.51■■□□□ 1.67
CLIC3-203ENST00000494426 CXCL14O95715 111 aa25.51■■□□□ 1.67
CLIC3-203ENST00000494426 UPP1Q16831 310 aa25.51■■□□□ 1.67
CLIC3-203ENST00000494426 RBM23Q86U06 439 aaKnown RBP25.51■■□□□ 1.67
CLIC3-203ENST00000494426 NELFCDQ8IXH7 590 aa25.51■■□□□ 1.67
CLIC3-203ENST00000494426 TMEM130Q8N3G9 435 aa25.51■■□□□ 1.67
CLIC3-203ENST00000494426 TIGD1Q96MW7 591 aa25.51■■□□□ 1.67
CLIC3-203ENST00000494426 HERC2P3Q9BVR0 1158 aa25.51■■□□□ 1.67
CLIC3-203ENST00000494426 PCIF1Q9H4Z3 704 aa25.51■■□□□ 1.67
CLIC3-203ENST00000494426 IGFLR1Q9H665 355 aa25.51■■□□□ 1.67
CLIC3-203ENST00000494426 SLC38A7Q9NVC3 462 aa25.51■■□□□ 1.67
CLIC3-203ENST00000494426 PER2O15055 1255 aa25.5■■□□□ 1.67
CLIC3-203ENST00000494426 LILRB3O75022 631 aa25.5■■□□□ 1.67
CLIC3-203ENST00000494426 TADA2AO75478 443 aa25.5■■□□□ 1.67
CLIC3-203ENST00000494426 RHOBTB3O94955 611 aa25.5■■□□□ 1.67
CLIC3-203ENST00000494426 SOD2P04179 222 aa25.5■■□□□ 1.67
CLIC3-203ENST00000494426 NRIP1P48552 1158 aa25.5■■□□□ 1.67
CLIC3-203ENST00000494426 PPP2R3AQ06190 1150 aa25.5■■□□□ 1.67
CLIC3-203ENST00000494426 PNOCQ13519 176 aa25.5■■□□□ 1.67
CLIC3-203ENST00000494426 SMC1AQ14683 1233 aaKnown RBP25.5■■□□□ 1.67
CLIC3-203ENST00000494426 CTC1Q2NKJ3 1217 aa25.5■■□□□ 1.67
CLIC3-203ENST00000494426 FUT10Q6P4F1 479 aa25.5■■□□□ 1.67
CLIC3-203ENST00000494426 HASPINQ8TF76 798 aa25.5■■□□□ 1.67
CLIC3-203ENST00000494426 SAAL1Q96ER3 474 aa25.5■■□□□ 1.67
CLIC3-203ENST00000494426 UROC1Q96N76 676 aa25.5■■□□□ 1.67
CLIC3-203ENST00000494426 TLE6Q9H808 572 aa25.5■■□□□ 1.67
CLIC3-203ENST00000494426 IRAK3Q9Y616 596 aa25.5■■□□□ 1.67
CLIC3-203ENST00000494426 LINC01565O15544 149 aa25.49■■□□□ 1.67
CLIC3-203ENST00000494426 POU5F1Q01860 360 aaKnown RBP25.49■■□□□ 1.67
CLIC3-203ENST00000494426 DUSP6Q16828 381 aa25.49■■□□□ 1.67
CLIC3-203ENST00000494426 ARMCX5Q6P1M9 558 aa25.49■■□□□ 1.67
CLIC3-203ENST00000494426 DCLRE1AQ6PJP8 1040 aa25.49■■□□□ 1.67
CLIC3-203ENST00000494426 CLEC17AQ6ZS10 378 aa25.49■■□□□ 1.67
CLIC3-203ENST00000494426 C3orf58Q8NDZ4 430 aa25.49■■□□□ 1.67
CLIC3-203ENST00000494426 HLA-CQ95604 372 aa25.49■■□□□ 1.67
CLIC3-203ENST00000494426 PABPC5Q96DU9 382 aaKnown RBP25.49■■□□□ 1.67
CLIC3-203ENST00000494426 FAM212AQ96EL1 285 aa25.49■■□□□ 1.67
CLIC3-203ENST00000494426 KIF12Q96FN5 646 aa25.49■■□□□ 1.67
CLIC3-203ENST00000494426 FAM213AQ9BRX8 229 aa25.49■■□□□ 1.67
CLIC3-203ENST00000494426 STK39Q9UEW8 545 aa25.49■■□□□ 1.67
CLIC3-203ENST00000494426 TUBGCP4Q9UGJ1 667 aa25.49■■□□□ 1.67
CLIC3-203ENST00000494426 GOLGA8IPA6NC78 632 aa25.48■■□□□ 1.67
CLIC3-203ENST00000494426 GOLGA8JA6NMD2 632 aa25.48■■□□□ 1.67
CLIC3-203ENST00000494426 TMEM189-UBE2V1I3L0A0 370 aa25.48■■□□□ 1.67
CLIC3-203ENST00000494426 LTBRP36941 435 aa25.48■■□□□ 1.67
CLIC3-203ENST00000494426 WNT7BP56706 349 aa25.48■■□□□ 1.67
CLIC3-203ENST00000494426 ADAM15Q13444 863 aa25.48■■□□□ 1.67
CLIC3-203ENST00000494426 KCNB1Q14721 858 aa25.48■■□□□ 1.67
CLIC3-203ENST00000494426 PTPN14Q15678 1187 aa25.48■■□□□ 1.67
CLIC3-203ENST00000494426 KIAA0319Q5VV43 1072 aa25.48■■□□□ 1.67
CLIC3-203ENST00000494426 JADE1Q6IE81 842 aa25.48■■□□□ 1.67
CLIC3-203ENST00000494426 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.48■■□□□ 1.67
CLIC3-203ENST00000494426 CD302Q8IX05 232 aa25.48■■□□□ 1.67
CLIC3-203ENST00000494426 PPP2R3CQ969Q6 453 aa25.48■■□□□ 1.67
CLIC3-203ENST00000494426 UBE2ZQ9H832 354 aaPredicted RBP25.48■■□□□ 1.67
CLIC3-203ENST00000494426 AGPAT3Q9NRZ7 376 aa25.48■■□□□ 1.67
CLIC3-203ENST00000494426 CHST7Q9NS84 486 aa25.48■■□□□ 1.67
CLIC3-203ENST00000494426 COG5Q9UP83 839 aa25.48■■□□□ 1.67
CLIC3-203ENST00000494426 EXTL3O43909 919 aa25.47■■□□□ 1.67
CLIC3-203ENST00000494426 LDHAP00338 332 aaKnown RBP25.47■■□□□ 1.67
CLIC3-203ENST00000494426 TFF2Q03403 129 aa25.47■■□□□ 1.67
CLIC3-203ENST00000494426 KNOP1Q1ED39 458 aaKnown RBP25.47■■□□□ 1.67
CLIC3-203ENST00000494426 EFHBQ8N7U6 833 aa25.47■■□□□ 1.67
CLIC3-203ENST00000494426 DDX27Q96GQ7 796 aaKnown RBP25.47■■□□□ 1.67
CLIC3-203ENST00000494426 B3GALT6Q96L58 329 aa25.47■■□□□ 1.67
CLIC3-203ENST00000494426 TSPAN18Q96SJ8 248 aa25.47■■□□□ 1.67
CLIC3-203ENST00000494426 ASB7Q9H672 318 aa25.47■■□□□ 1.67
CLIC3-203ENST00000494426 THEGQ9P2T0 379 aa25.47■■□□□ 1.67
CLIC3-203ENST00000494426 VWA8A3KMH1 1905 aa25.46■■□□□ 1.67
CLIC3-203ENST00000494426 PODXLO00592 558 aa25.46■■□□□ 1.67
CLIC3-203ENST00000494426 CLIC2O15247 247 aa25.46■■□□□ 1.67
CLIC3-203ENST00000494426 NCK2O43639 380 aa25.46■■□□□ 1.67
CLIC3-203ENST00000494426 PRPF40AO75400 957 aaKnown RBP25.46■■□□□ 1.67
CLIC3-203ENST00000494426 B3GAT3O94766 335 aa25.46■■□□□ 1.67
CLIC3-203ENST00000494426 NFICP08651 508 aa25.46■■□□□ 1.67
CLIC3-203ENST00000494426 RPL9P32969 192 aaKnown RBP25.46■■□□□ 1.67
CLIC3-203ENST00000494426 GUCY2FP51841 1108 aa25.46■■□□□ 1.67
CLIC3-203ENST00000494426 UBE2HP62256 183 aa25.46■■□□□ 1.67
CLIC3-203ENST00000494426 RBM10P98175 930 aaKnown RBP25.46■■□□□ 1.67
CLIC3-203ENST00000494426 DLX2Q07687 328 aaPredicted RBP25.46■■□□□ 1.67
CLIC3-203ENST00000494426 KCNC3Q14003 757 aa25.46■■□□□ 1.67
CLIC3-203ENST00000494426 GPD1LQ8N335 351 aa25.46■■□□□ 1.67
CLIC3-203ENST00000494426 VN1R2Q8NFZ6 395 aa25.46■■□□□ 1.67
CLIC3-203ENST00000494426 ERCC4Q92889 916 aaPredicted RBP25.46■■□□□ 1.67
CLIC3-203ENST00000494426 CCDC47Q96A33 483 aaKnown RBP25.46■■□□□ 1.67
CLIC3-203ENST00000494426 CCDC34Q96HJ3 373 aa25.46■■□□□ 1.67
CLIC3-203ENST00000494426 CLDND1Q9NY35 253 aa25.46■■□□□ 1.67
CLIC3-203ENST00000494426 HSPBP1Q9NZL4 362 aa25.46■■□□□ 1.67
CLIC3-203ENST00000494426 UBQLN1Q9UMX0 589 aaKnown RBP25.46■■□□□ 1.67
CLIC3-203ENST00000494426 SF3B1O75533 1304 aaKnown RBP eCLIP25.45■■□□□ 1.66
CLIC3-203ENST00000494426 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.45■■□□□ 1.66
CLIC3-203ENST00000494426 KIAA0391O15091 583 aaKnown RBP25.45■■□□□ 1.66
CLIC3-203ENST00000494426 CLASP2O75122 1294 aaKnown RBP25.45■■□□□ 1.66
CLIC3-203ENST00000494426 GLP2RO95838 553 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms