RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 ADRB2P07550 413 aa13.55□□□□□ -0.24
TRA2A-209ENST00000494255 BMS1Q14692 1282 aaKnown RBP13.55□□□□□ -0.24
TRA2A-209ENST00000494255 CRELD2Q6UXH1 353 aaPredicted RBP13.55□□□□□ -0.24
TRA2A-209ENST00000494255 BRSK2Q8IWQ3 736 aa13.55□□□□□ -0.24
TRA2A-209ENST00000494255 C12orf56Q8IXR9 622 aa13.55□□□□□ -0.24
TRA2A-209ENST00000494255 SMYD4Q8IYR2 804 aaPredicted RBP13.55□□□□□ -0.24
TRA2A-209ENST00000494255 XXYLT1Q8NBI6 393 aa13.55□□□□□ -0.24
TRA2A-209ENST00000494255 DDX27Q96GQ7 796 aaKnown RBP13.55□□□□□ -0.24
TRA2A-209ENST00000494255 ZMAT2Q96NC0 199 aaKnown RBP13.55□□□□□ -0.24
TRA2A-209ENST00000494255 TLR9Q9NR96 1032 aa13.55□□□□□ -0.24
TRA2A-209ENST00000494255 KIAA1468Q9P260 1216 aa13.55□□□□□ -0.24
TRA2A-209ENST00000494255 STK39Q9UEW8 545 aa13.55□□□□□ -0.24
TRA2A-209ENST00000494255 UBQLN1Q9UMX0 589 aaKnown RBP13.55□□□□□ -0.24
TRA2A-209ENST00000494255 DERAQ9Y315 318 aa13.55□□□□□ -0.24
TRA2A-209ENST00000494255 BIN1O00499 593 aa13.54□□□□□ -0.24
TRA2A-209ENST00000494255 EXOC3O60645 756 aa13.54□□□□□ -0.24
TRA2A-209ENST00000494255 CSPG5O95196 566 aa13.54□□□□□ -0.24
TRA2A-209ENST00000494255 POU3F3P20264 500 aaPredicted RBP13.54□□□□□ -0.24
TRA2A-209ENST00000494255 PPP1R2P41236 205 aa13.54□□□□□ -0.24
TRA2A-209ENST00000494255 SPAG1Q07617 926 aa13.54□□□□□ -0.24
TRA2A-209ENST00000494255 TMEM132DQ14C87 1099 aa13.54□□□□□ -0.24
TRA2A-209ENST00000494255 NAB2Q15742 525 aa13.54□□□□□ -0.24
TRA2A-209ENST00000494255 TIGD5Q53EQ6 642 aa13.54□□□□□ -0.24
TRA2A-209ENST00000494255 COBLL1Q53SF7 1204 aa13.54□□□□□ -0.24
TRA2A-209ENST00000494255 ISM2Q6H9L7 571 aa13.54□□□□□ -0.24
TRA2A-209ENST00000494255 JADE1Q6IE81 842 aa13.54□□□□□ -0.24
TRA2A-209ENST00000494255 DDX53Q86TM3 631 aaKnown RBP13.54□□□□□ -0.24
TRA2A-209ENST00000494255 TMEM173Q86WV6 379 aaPredicted RBP13.54□□□□□ -0.24
TRA2A-209ENST00000494255 ZSWIM2Q8NEG5 633 aa13.54□□□□□ -0.24
TRA2A-209ENST00000494255 MICAL1Q8TDZ2 1067 aa13.54□□□□□ -0.24
TRA2A-209ENST00000494255 C18orf25Q96B23 403 aaPredicted RBP13.54□□□□□ -0.24
TRA2A-209ENST00000494255 ADAM28Q9UKQ2 775 aa13.54□□□□□ -0.24
TRA2A-209ENST00000494255 MTCH2Q9Y6C9 303 aa13.54□□□□□ -0.24
TRA2A-209ENST00000494255 TADA2AO75478 443 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 NR3C1P04150 777 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 PRCPP42785 496 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 SOX4Q06945 474 aaPredicted RBP13.53□□□□□ -0.24
TRA2A-209ENST00000494255 SURF1Q15526 300 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 PDE12Q6L8Q7 609 aaKnown RBP13.53□□□□□ -0.24
TRA2A-209ENST00000494255 MICALL1Q8N3F8 863 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 TRIML1Q8N9V2 468 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 RDH13Q8NBN7 331 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 BEST2Q8NFU1 509 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 GPT2Q8TD30 523 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 BCL7CQ8WUZ0 217 aaPredicted RBP13.53□□□□□ -0.24
TRA2A-209ENST00000494255 RABGGTAQ92696 567 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 TSG101Q99816 390 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 GOLGA2P5Q9HBQ8 144 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 ENTPD7Q9NQZ7 604 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 CACNG4Q9UBN1 327 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 TRAF3IP3Q9Y228 551 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 STXBP5LQ9Y2K9 1186 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 C2CD2Q9Y426 696 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 ANK1P16157 1881 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 PSMA7O14818 248 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 NFICP08651 508 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 CYP3A5P20815 502 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 DNAJB1P25685 340 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 RPL13P26373 211 aaKnown RBP13.53□□□□□ -0.24
TRA2A-209ENST00000494255 RPL9P32969 192 aaKnown RBP13.53□□□□□ -0.24
TRA2A-209ENST00000494255 MCM4P33991 863 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 MYBPC2Q14324 1141 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 SNRNP35Q16560 246 aaKnown RBP13.53□□□□□ -0.24
TRA2A-209ENST00000494255 DCLRE1AQ6PJP8 1040 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 TMC7Q7Z402 723 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 NT5DC4Q86YG4 428 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 CBWD2Q8IUF1 395 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 SLC9A9Q8IVB4 645 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 VPS52Q8N1B4 723 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 PPP2R3CQ969Q6 453 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 FBXL18Q96ME1 805 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 PAAF1Q9BRP4 392 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 MARCH5Q9NX47 278 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 TUBGCP4Q9UGJ1 667 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 FRMD4BQ9Y2L6 1034 aa13.53□□□□□ -0.24
TRA2A-209ENST00000494255 CHD9Q3L8U1 2897 aa13.52□□□□□ -0.24
TRA2A-209ENST00000494255 SF3B1O75533 1304 aaKnown RBP eCLIP13.52□□□□□ -0.242e-7■■■■■ 28.2
TRA2A-209ENST00000494255 PODXLO00592 558 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 B3GAT3O94766 335 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 KIF4AO95239 1232 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 CA8P35219 290 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 CLCNKBP51801 687 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 MORC3Q14149 939 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 ZBTB6Q15916 424 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 NFIL3Q16649 462 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 UPP1Q16831 310 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 FUT10Q6P4F1 479 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 ADSSL1Q8N142 457 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 HASPINQ8TF76 798 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 CACTINQ8WUQ7 758 aaKnown RBP13.52□□□□□ -0.25
TRA2A-209ENST00000494255 FNBP1Q96RU3 617 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 TCF25Q9BQ70 676 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 NSUN3Q9H649 340 aaKnown RBP13.52□□□□□ -0.25
TRA2A-209ENST00000494255 PDE11AQ9HCR9 933 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 NGRNQ9NPE2 291 aaKnown RBP13.52□□□□□ -0.25
TRA2A-209ENST00000494255 DMAC2Q9NW81 257 aa13.52□□□□□ -0.25
TRA2A-209ENST00000494255 F8W810 466 aa13.51□□□□□ -0.25
TRA2A-209ENST00000494255 TMEM189-UBE2V1I3L0A0 370 aa13.51□□□□□ -0.25
TRA2A-209ENST00000494255 TRAPPC3O43617 180 aa13.51□□□□□ -0.25
TRA2A-209ENST00000494255 NR2F2P24468 414 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms