RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 DPF2Q92785 391 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 HAS1Q92839 578 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 PRRX2Q99811 253 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 PACSIN1Q9BY11 444 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 RTFDC1Q9BY42 306 aaPredicted RBP3.05□□□□□ -1.92
LMNB1-207ENST00000494185 ENKD1Q9H0I2 346 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.05□□□□□ -1.92
LMNB1-207ENST00000494185 FEZ2Q9UHY8 353 aaPredicted RBP3.05□□□□□ -1.92
LMNB1-207ENST00000494185 SERPINB13Q9UIV8 391 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 LIMCH1Q9UPQ0 1083 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 IPPQ9Y573 584 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 PAXBP1Q9Y5B6 917 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 NOX1Q9Y5S8 564 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 STC2O76061 302 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 HAUS5O94927 633 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 ABHD16AO95870 558 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 SCGB1D2O95969 90 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 ANXA1P04083 346 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 GNAI2P04899 355 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 C6P13671 934 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 EDNRBP24530 442 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 CYP2C19P33261 490 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 SLC6A9P48067 706 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 PURAQ00577 322 aaKnown RBP3.04□□□□□ -1.92
LMNB1-207ENST00000494185 TAP1Q03518 808 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 PIGFQ07326 219 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 R3HDM1Q15032 1099 aaKnown RBP3.04□□□□□ -1.92
LMNB1-207ENST00000494185 BMT2Q1RMZ1 405 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 FAM214AQ32MH5 1076 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 C3orf36Q3SXR2 165 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 OTUD7BQ6GQQ9 843 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 KCNV1Q6PIU1 500 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 GDF7Q7Z4P5 450 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 CERS3Q8IU89 383 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 COLGALT2Q8IYK4 626 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 CHPFQ8IZ52 775 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 ZNF276Q8N554 614 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 FITM2Q8N6M3 262 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 REPS2Q8NFH8 660 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 CPT1CQ8TCG5 803 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 CCHCR1Q8TD31 782 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 MED15Q96RN5 788 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 NDC1Q9BTX1 674 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 C11orf54Q9H0W9 315 aaPredicted RBP3.04□□□□□ -1.92
LMNB1-207ENST00000494185 TRPM5Q9NZQ8 1165 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 FAM30AQ9NZY2 134 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 CALCOCO1Q9P1Z2 691 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 AJAP1Q9UKB5 411 aaPredicted RBP3.04□□□□□ -1.92
LMNB1-207ENST00000494185 SORCS3Q9UPU3 1222 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 DMTF1Q9Y222 760 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 SIK3Q9Y2K2 1263 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 RIPOR2Q9Y4F9 1068 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 PCDHA13Q9Y5I0 950 aa3.04□□□□□ -1.92
LMNB1-207ENST00000494185 ZMYM3Q14202 1370 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 MYBBP1AQ9BQG0 1328 aaKnown RBP3.03□□□□□ -1.92
LMNB1-207ENST00000494185 WDR33Q9C0J8 1336 aaKnown RBP3.03□□□□□ -1.92
LMNB1-207ENST00000494185 GOLGA6CA6NDK9 693 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 GOLGA6BA6NDN3 693 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 KIF3BO15066 747 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 TPD52L2O43399 206 aaKnown RBP3.03□□□□□ -1.92
LMNB1-207ENST00000494185 TSPAN6O43657 245 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 PRC1O43663 620 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 ERN1O75460 977 aaKnown RBP3.03□□□□□ -1.92
LMNB1-207ENST00000494185 OFD1O75665 1012 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 CHEK2O96017 543 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 ITGB1P05556 798 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 POU2F2P09086 479 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 GOLGA6DP0CG33 693 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 ALOX15P16050 662 aaPredicted RBP3.03□□□□□ -1.92
LMNB1-207ENST00000494185 HSPA6P17066 643 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 DDCP20711 480 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 PDCP20941 246 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 GUCY1A2P33402 732 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 RABGGTBP53611 331 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 USP14P54578 494 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 RAP2BP61225 183 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 IL10RAQ13651 578 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 GTF2H3Q13889 308 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 HLTFQ14527 1009 aaKnown RBP eCLIP3.03□□□□□ -1.92
LMNB1-207ENST00000494185 MFSD14BQ5SR56 506 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 IFIT1BQ5T764 474 aaKnown RBP3.03□□□□□ -1.92
LMNB1-207ENST00000494185 FAM102BQ5T8I3 360 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 AFMIDQ63HM1 303 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 CXorf57Q6NSI4 855 aaKnown RBP3.03□□□□□ -1.92
LMNB1-207ENST00000494185 PPP4R4Q6NUP7 873 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 ZNF529Q6P280 563 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 LRRC55Q6ZSA7 311 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 SEM1Q6ZVN7 128 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 USP45Q70EL2 814 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 CATIPQ7Z7H3 387 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 TPH2Q8IWU9 490 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 CCDC146Q8IYE0 955 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 FAM43AQ8N2R8 423 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 FBXO18Q8NFZ0 1043 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 SLC9A6Q92581 669 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 DDX17Q92841 729 aaKnown RBP3.03□□□□□ -1.92
LMNB1-207ENST00000494185 KAT5Q92993 513 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 PGBD4Q96DM1 585 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 CEP95Q96GE4 821 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 TMX3Q96JJ7 454 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms