RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 TFAMQ00059 246 aaKnown RBP16.14■□□□□ 0.17
ACTB-213ENST00000493945 TUSC3Q13454 348 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 BIRC3Q13489 604 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 TRPC3Q13507 836 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 BTG3Q14201 252 aaPredicted RBP16.14■□□□□ 0.17
ACTB-213ENST00000493945 XKR4Q5GH76 650 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 TCP11X2Q5H9J9 407 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 SPOUT1Q5T280 376 aaKnown RBP16.14■□□□□ 0.17
ACTB-213ENST00000493945 CDKAL1Q5VV42 579 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 CRELD2Q6UXH1 353 aaPredicted RBP16.14■□□□□ 0.17
ACTB-213ENST00000493945 C16orf59Q7L2K0 433 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 LUZP1Q86V48 1076 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 HERC6Q8IVU3 1022 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 DHX40Q8IX18 779 aaKnown RBP16.14■□□□□ 0.17
ACTB-213ENST00000493945 TDHQ8IZJ6 230 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 PARD3BQ8TEW8 1205 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 DDX27Q96GQ7 796 aaKnown RBP16.14■□□□□ 0.17
ACTB-213ENST00000493945 ZNF560Q96MR9 790 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 RAD9AQ99638 391 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 PDE11AQ9HCR9 933 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 FANCLQ9NW38 375 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 KLK14Q9P0G3 267 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 STK39Q9UEW8 545 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 ITGA11Q9UKX5 1188 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 COL4A6Q14031 1691 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 SMIM28A0A1B0GU29 152 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 A0A1W2PPC1 479 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 P4HA2O15460 535 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 CBFA2T2O43439 604 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 OFD1O75665 1012 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 DGKIO75912 1065 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 SERPINC1P01008 464 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 AFPP02771 609 aaKnown RBP16.13■□□□□ 0.17
ACTB-213ENST00000493945 FGFR1P11362 822 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 LAG3P18627 525 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 PNPLA4P41247 253 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 SCNN1GP51170 649 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 EPHB4P54760 987 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 IQCB1Q15051 598 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 RAB30Q15771 203 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 ZBTB41Q5SVQ8 909 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 KRT39Q6A163 491 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 JADE1Q6IE81 842 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 EEF2KMTQ96G04 330 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 TMEM175Q9BSA9 504 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 TUBGCP2Q9BSJ2 902 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 TMEM8AQ9HCN3 771 aa16.13■□□□□ 0.17
ACTB-213ENST00000493945 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.12■□□□□ 0.17
ACTB-213ENST00000493945 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.12■□□□□ 0.17
ACTB-213ENST00000493945 RPL9P32969 192 aaKnown RBP16.12■□□□□ 0.17
ACTB-213ENST00000493945 PPM1AP35813 382 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 MYL7Q01449 175 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 MYO1EQ12965 1108 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 TCTN1Q2MV58 587 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 CLLU1OSQ5K130 101 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 RASIP1Q5U651 963 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 FAM117BQ6P1L5 589 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 ALKAL1Q6UXT8 129 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 TRIM59Q8IWR1 403 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 TMEM192Q8IY95 271 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 FIBCD1Q8N539 461 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 RNF214Q8ND24 703 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 VWCEQ96DN2 955 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 ZFP42Q96MM3 310 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 RNF39Q9H2S5 420 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 SAMSN1Q9NSI8 373 aaKnown RBP16.12■□□□□ 0.17
ACTB-213ENST00000493945 INTS13Q9NVM9 706 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 MSRAQ9UJ68 235 aa16.12■□□□□ 0.17
ACTB-213ENST00000493945 LRRIQ3A6PVS8 624 aaPredicted RBP16.11■□□□□ 0.17
ACTB-213ENST00000493945 POMCP01189 267 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 NFICP08651 508 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 P4HA1P13674 534 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 ZNF18P17022 549 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 PIK3CAP42336 1068 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 ALDH7A1P49419 539 aaKnown RBP16.11■□□□□ 0.17
ACTB-213ENST00000493945 CLDN10P78369 228 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 RBP5P82980 135 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 NCAPHQ15003 741 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 SHHQ15465 462 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 UVSSAQ2YD98 709 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 GLRA4Q5JXX5 417 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 SAMD11Q96NU1 681 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 CASD1Q96PB1 797 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 PPP1R10Q96QC0 940 aaKnown RBP16.11■□□□□ 0.17
ACTB-213ENST00000493945 MTMR12Q9C0I1 747 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 DNAI2Q9GZS0 605 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 TBC1D13Q9NVG8 400 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 DPP3Q9NY33 737 aa16.11■□□□□ 0.17
ACTB-213ENST00000493945 CXXC1Q9P0U4 656 aaPredicted RBP16.11■□□□□ 0.17
ACTB-213ENST00000493945 PTPRSQ13332 1948 aa16.1■□□□□ 0.17
ACTB-213ENST00000493945 GTPBP10A4D1E9 387 aaKnown RBP16.1■□□□□ 0.17
ACTB-213ENST00000493945 TRAPPC3O43617 180 aa16.1■□□□□ 0.17
ACTB-213ENST00000493945 ZC3H11AO75152 810 aaKnown RBP eCLIP16.1■□□□□ 0.17
ACTB-213ENST00000493945 KRT19P08727 400 aa16.1■□□□□ 0.17
ACTB-213ENST00000493945 TRIM49P0CI25 452 aa16.1■□□□□ 0.17
ACTB-213ENST00000493945 TRIM49CP0CI26 452 aa16.1■□□□□ 0.17
ACTB-213ENST00000493945 TRIM21P19474 475 aaKnown RBP16.1■□□□□ 0.17
ACTB-213ENST00000493945 HTRA4P83105 476 aaPredicted RBP16.1■□□□□ 0.17
ACTB-213ENST00000493945 KCNH2Q12809 1159 aa16.1■□□□□ 0.17
ACTB-213ENST00000493945 ELAVL2Q12926 359 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms