RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 GJD3Q8N144 294 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 HASPINQ8TF76 798 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 DHX58Q96C10 678 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 DDX27Q96GQ7 796 aaKnown RBP24.7■■□□□ 1.54
SNIP1-203ENST00000493916 MRPL44Q9H9J2 332 aaKnown RBP24.7■■□□□ 1.54
SNIP1-203ENST00000493916 MAGEF1Q9HAY2 307 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 CD320Q9NPF0 282 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 NCOR1O75376 2440 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 OGTO15294 1046 aa24.69■■□□□ 1.54
SNIP1-203ENST00000493916 TEX28O15482 410 aa24.69■■□□□ 1.54
SNIP1-203ENST00000493916 ADH1AP07327 375 aa24.69■■□□□ 1.54
SNIP1-203ENST00000493916 CXCL8P10145 99 aa24.69■■□□□ 1.54
SNIP1-203ENST00000493916 IDEP14735 1019 aa24.69■■□□□ 1.54
SNIP1-203ENST00000493916 DCLRE1AQ6PJP8 1040 aa24.69■■□□□ 1.54
SNIP1-203ENST00000493916 B3GALT6Q96L58 329 aa24.69■■□□□ 1.54
SNIP1-203ENST00000493916 GOLGA2P5Q9HBQ8 144 aa24.69■■□□□ 1.54
SNIP1-203ENST00000493916 FAM13BQ9NYF5 915 aa24.69■■□□□ 1.54
SNIP1-203ENST00000493916 FNIP2Q9P278 1114 aa24.69■■□□□ 1.54
SNIP1-203ENST00000493916 CITO14578 2027 aa24.68■■□□□ 1.54
SNIP1-203ENST00000493916 C1RP00736 705 aa24.68■■□□□ 1.54
SNIP1-203ENST00000493916 KRT85P78386 507 aa24.68■■□□□ 1.54
SNIP1-203ENST00000493916 AMPD3Q01432 767 aa24.68■■□□□ 1.54
SNIP1-203ENST00000493916 ITIH3Q06033 890 aa24.68■■□□□ 1.54
SNIP1-203ENST00000493916 ALCAMQ13740 583 aa24.68■■□□□ 1.54
SNIP1-203ENST00000493916 HERC4Q5GLZ8 1057 aaPredicted RBP24.68■■□□□ 1.54
SNIP1-203ENST00000493916 CNNM4Q6P4Q7 775 aa24.68■■□□□ 1.54
SNIP1-203ENST00000493916 RIN2Q8WYP3 895 aaPredicted RBP24.68■■□□□ 1.54
SNIP1-203ENST00000493916 FBXL18Q96ME1 805 aa24.68■■□□□ 1.54
SNIP1-203ENST00000493916 TTPALQ9BTX7 342 aa24.68■■□□□ 1.54
SNIP1-203ENST00000493916 MSTO1Q9BUK6 570 aa24.68■■□□□ 1.54
SNIP1-203ENST00000493916 TRIM9Q9C026 710 aa24.68■■□□□ 1.54
SNIP1-203ENST00000493916 PANK4Q9NVE7 773 aa24.68■■□□□ 1.54
SNIP1-203ENST00000493916 ATP6V1DQ9Y5K8 247 aa24.68■■□□□ 1.54
SNIP1-203ENST00000493916 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.68■■□□□ 1.54
SNIP1-203ENST00000493916 STYXL1Q9Y6J8 313 aa24.68■■□□□ 1.54
SNIP1-203ENST00000493916 PDCD11Q14690 1871 aaKnown RBP24.67■■□□□ 1.54
SNIP1-203ENST00000493916 TTC26A0AVF1 554 aa24.67■■□□□ 1.54
SNIP1-203ENST00000493916 B3GAT3O94766 335 aa24.67■■□□□ 1.54
SNIP1-203ENST00000493916 SSTR3P32745 418 aaPredicted RBP24.67■■□□□ 1.54
SNIP1-203ENST00000493916 TNFSF9P41273 254 aa24.67■■□□□ 1.54
SNIP1-203ENST00000493916 RTP2Q5QGT7 225 aa24.67■■□□□ 1.54
SNIP1-203ENST00000493916 L1TD1Q5T7N2 865 aaKnown RBP24.67■■□□□ 1.54
SNIP1-203ENST00000493916 FAM171A1Q5VUB5 890 aa24.67■■□□□ 1.54
SNIP1-203ENST00000493916 SLFN12LQ6IEE8 588 aa24.67■■□□□ 1.54
SNIP1-203ENST00000493916 CD300LGQ6UXG3 332 aa24.67■■□□□ 1.54
SNIP1-203ENST00000493916 CCDC65Q8IXS2 484 aa24.67■■□□□ 1.54
SNIP1-203ENST00000493916 PYM1Q9BRP8 204 aaKnown RBP24.67■■□□□ 1.54
SNIP1-203ENST00000493916 ADAM7Q9H2U9 754 aa24.67■■□□□ 1.54
SNIP1-203ENST00000493916 TRIP11Q15643 1979 aa24.67■■□□□ 1.54
SNIP1-203ENST00000493916 ANKRD63C9JTQ0 380 aa24.66■■□□□ 1.54
SNIP1-203ENST00000493916 PODXLO00592 558 aa24.66■■□□□ 1.54
SNIP1-203ENST00000493916 POLR2DO15514 142 aaKnown RBP24.66■■□□□ 1.54
SNIP1-203ENST00000493916 ADRB2P07550 413 aa24.66■■□□□ 1.54
SNIP1-203ENST00000493916 RPL9P32969 192 aaKnown RBP24.66■■□□□ 1.54
SNIP1-203ENST00000493916 PPP2R3AQ06190 1150 aa24.66■■□□□ 1.54
SNIP1-203ENST00000493916 CBX2Q14781 532 aaPredicted RBP24.66■■□□□ 1.54
SNIP1-203ENST00000493916 ENOX2Q16206 610 aaKnown RBP24.66■■□□□ 1.54
SNIP1-203ENST00000493916 ZBTB41Q5SVQ8 909 aa24.66■■□□□ 1.54
SNIP1-203ENST00000493916 PDXDC1Q6P996 788 aa24.66■■□□□ 1.54
SNIP1-203ENST00000493916 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.66■■□□□ 1.54
SNIP1-203ENST00000493916 C3orf58Q8NDZ4 430 aa24.66■■□□□ 1.54
SNIP1-203ENST00000493916 LEO1Q8WVC0 666 aaPredicted RBP24.66■■□□□ 1.54
SNIP1-203ENST00000493916 PIK3R5Q8WYR1 880 aa24.66■■□□□ 1.54
SNIP1-203ENST00000493916 STAMQ92783 540 aa24.66■■□□□ 1.54
SNIP1-203ENST00000493916 C18orf25Q96B23 403 aaPredicted RBP24.66■■□□□ 1.54
SNIP1-203ENST00000493916 ACCSQ96QU6 501 aa24.66■■□□□ 1.54
SNIP1-203ENST00000493916 TSPAN18Q96SJ8 248 aa24.66■■□□□ 1.54
SNIP1-203ENST00000493916 APOL5Q9BWW9 433 aa24.66■■□□□ 1.54
SNIP1-203ENST00000493916 PHF7Q9BWX1 381 aaPredicted RBP24.66■■□□□ 1.54
SNIP1-203ENST00000493916 TBC1D7Q9P0N9 293 aa24.66■■□□□ 1.54
SNIP1-203ENST00000493916 CPSF3Q9UKF6 684 aaKnown RBP24.66■■□□□ 1.54
SNIP1-203ENST00000493916 EXOC7Q9UPT5 735 aa24.66■■□□□ 1.54
SNIP1-203ENST00000493916 PCDHB13Q9Y5F0 798 aa24.66■■□□□ 1.54
SNIP1-203ENST00000493916 GCNT3O95395 438 aa24.65■■□□□ 1.54
SNIP1-203ENST00000493916 GLUD1P00367 558 aa24.65■■□□□ 1.54
SNIP1-203ENST00000493916 CASP5P51878 434 aa24.65■■□□□ 1.54
SNIP1-203ENST00000493916 CES5AQ6NT32 575 aa24.65■■□□□ 1.54
SNIP1-203ENST00000493916 SPATA32Q96LK8 384 aa24.65■■□□□ 1.54
SNIP1-203ENST00000493916 SFXN1Q9H9B4 322 aa24.65■■□□□ 1.54
SNIP1-203ENST00000493916 RPF1Q9H9Y2 349 aaKnown RBP24.65■■□□□ 1.54
SNIP1-203ENST00000493916 DPP7Q9UHL4 492 aa24.65■■□□□ 1.54
SNIP1-203ENST00000493916 TISP43B9A030 160 aa24.64■■□□□ 1.54
SNIP1-203ENST00000493916 TRAPPC3O43617 180 aa24.64■■□□□ 1.54
SNIP1-203ENST00000493916 MYBP10242 640 aa24.64■■□□□ 1.54
SNIP1-203ENST00000493916 FGFR3P22607 806 aa24.64■■□□□ 1.54
SNIP1-203ENST00000493916 IGFBP6P24592 240 aaPredicted RBP24.64■■□□□ 1.54
SNIP1-203ENST00000493916 RARS2Q5T160 578 aaKnown RBP24.64■■□□□ 1.54
SNIP1-203ENST00000493916 CD302Q8IX05 232 aa24.64■■□□□ 1.54
SNIP1-203ENST00000493916 LNX1Q8TBB1 728 aaPredicted RBP24.64■■□□□ 1.54
SNIP1-203ENST00000493916 NECTIN4Q96NY8 510 aa24.64■■□□□ 1.54
SNIP1-203ENST00000493916 C7orf25Q9BPX7 421 aa24.64■■□□□ 1.54
SNIP1-203ENST00000493916 FGFBP2Q9BYJ0 223 aa24.64■■□□□ 1.54
SNIP1-203ENST00000493916 KCNH3Q9ULD8 1083 aa24.64■■□□□ 1.54
SNIP1-203ENST00000493916 LACTBL1A8MY62 500 aa24.63■■□□□ 1.53
SNIP1-203ENST00000493916 LOC730098B7Z3J9 87 aa24.63■■□□□ 1.53
SNIP1-203ENST00000493916 ASIC1P78348 528 aa24.63■■□□□ 1.53
SNIP1-203ENST00000493916 POU5F1Q01860 360 aaKnown RBP24.63■■□□□ 1.53
SNIP1-203ENST00000493916 KCNA1Q09470 495 aa24.63■■□□□ 1.53
SNIP1-203ENST00000493916 ZBTB6Q15916 424 aa24.63■■□□□ 1.53
SNIP1-203ENST00000493916 PSMD5Q16401 504 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms