RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 LRRN2O75325 713 aa19.1■□□□□ 0.65
COL9A1-210ENST00000493682 SP9P0CG40 484 aa19.1■□□□□ 0.65
COL9A1-210ENST00000493682 TKTP29401 623 aaKnown RBP19.1■□□□□ 0.65
COL9A1-210ENST00000493682 ID4P47928 161 aa19.1■□□□□ 0.65
COL9A1-210ENST00000493682 SNW1Q13573 536 aaKnown RBP19.1■□□□□ 0.65
COL9A1-210ENST00000493682 PABPC1LQ4VXU2 614 aaKnown RBP19.1■□□□□ 0.65
COL9A1-210ENST00000493682 RTL10Q7L3V2 364 aa19.1■□□□□ 0.65
COL9A1-210ENST00000493682 APBB1IPQ7Z5R6 666 aaPredicted RBP19.1■□□□□ 0.65
COL9A1-210ENST00000493682 C3orf58Q8NDZ4 430 aa19.1■□□□□ 0.65
COL9A1-210ENST00000493682 FBXO18Q8NFZ0 1043 aa19.1■□□□□ 0.65
COL9A1-210ENST00000493682 DDX27Q96GQ7 796 aaKnown RBP19.1■□□□□ 0.65
COL9A1-210ENST00000493682 LLPHQ9BRT6 129 aaKnown RBP19.1■□□□□ 0.65
COL9A1-210ENST00000493682 GOLGA2P5Q9HBQ8 144 aa19.1■□□□□ 0.65
COL9A1-210ENST00000493682 KCNH3Q9ULD8 1083 aa19.1■□□□□ 0.65
COL9A1-210ENST00000493682 KIAA1024Q9UPX6 916 aa19.1■□□□□ 0.65
COL9A1-210ENST00000493682 TNFSF13BQ9Y275 285 aa19.1■□□□□ 0.65
COL9A1-210ENST00000493682 MYH15Q9Y2K3 1946 aa19.1■□□□□ 0.65
COL9A1-210ENST00000493682 GVINP1Q7Z2Y8 2422 aa19.09■□□□□ 0.65
COL9A1-210ENST00000493682 SMIM28A0A1B0GU29 152 aa19.09■□□□□ 0.65
COL9A1-210ENST00000493682 TRAPPC3O43617 180 aa19.09■□□□□ 0.65
COL9A1-210ENST00000493682 NEFLP07196 543 aa19.09■□□□□ 0.65
COL9A1-210ENST00000493682 NBR1Q14596 966 aa19.09■□□□□ 0.65
COL9A1-210ENST00000493682 ANKS3Q6ZW76 656 aa19.09■□□□□ 0.65
COL9A1-210ENST00000493682 NPAS3Q8IXF0 933 aa19.09■□□□□ 0.65
COL9A1-210ENST00000493682 CEP120Q8N960 986 aa19.09■□□□□ 0.65
COL9A1-210ENST00000493682 KXD1Q9BQD3 176 aa19.09■□□□□ 0.65
COL9A1-210ENST00000493682 DDX23Q9BUQ8 820 aaKnown RBP19.09■□□□□ 0.65
COL9A1-210ENST00000493682 DDX19AQ9NUU7 478 aaKnown RBP19.09■□□□□ 0.65
COL9A1-210ENST00000493682 LRWD1Q9UFC0 647 aa19.09■□□□□ 0.65
COL9A1-210ENST00000493682 KANSL1LA0AUZ9 987 aa19.08■□□□□ 0.64
COL9A1-210ENST00000493682 SEC24BO95487 1268 aa19.08■□□□□ 0.64
COL9A1-210ENST00000493682 GRM5P41594 1212 aa19.08■□□□□ 0.64
COL9A1-210ENST00000493682 BRCC3P46736 316 aa19.08■□□□□ 0.64
COL9A1-210ENST00000493682 TRAPPC10P48553 1259 aa19.08■□□□□ 0.64
COL9A1-210ENST00000493682 PEX3P56589 373 aa19.08■□□□□ 0.64
COL9A1-210ENST00000493682 SOX4Q06945 474 aaPredicted RBP19.08■□□□□ 0.64
COL9A1-210ENST00000493682 MLF2Q15773 248 aaPredicted RBP19.08■□□□□ 0.64
COL9A1-210ENST00000493682 SLC44A4Q53GD3 710 aa19.08■□□□□ 0.64
COL9A1-210ENST00000493682 XKR4Q5GH76 650 aa19.08■□□□□ 0.64
COL9A1-210ENST00000493682 ZC3H14Q6PJT7 736 aaKnown RBP19.08■□□□□ 0.64
COL9A1-210ENST00000493682 ALKAL1Q6UXT8 129 aa19.08■□□□□ 0.64
COL9A1-210ENST00000493682 ERMP1Q7Z2K6 904 aa19.08■□□□□ 0.64
COL9A1-210ENST00000493682 ING5Q8WYH8 240 aa19.08■□□□□ 0.64
COL9A1-210ENST00000493682 ACO2Q99798 780 aaKnown RBP19.08■□□□□ 0.64
COL9A1-210ENST00000493682 CDT1Q9H211 546 aa19.08■□□□□ 0.64
COL9A1-210ENST00000493682 COL4A3Q01955 1670 aa19.08■□□□□ 0.64
COL9A1-210ENST00000493682 WDR87Q6ZQQ6 2873 aa19.07■□□□□ 0.64
COL9A1-210ENST00000493682 PHLPP2Q6ZVD8 1323 aa19.07■□□□□ 0.64
COL9A1-210ENST00000493682 NOTCH4Q99466 2003 aa19.07■□□□□ 0.64
COL9A1-210ENST00000493682 CCDC169A6NNP5 214 aa19.07■□□□□ 0.64
COL9A1-210ENST00000493682 EIF5BO60841 1220 aaKnown RBP19.07■□□□□ 0.64
COL9A1-210ENST00000493682 NPTX2P47972 431 aa19.07■□□□□ 0.64
COL9A1-210ENST00000493682 YARSP54577 528 aaKnown RBP19.07■□□□□ 0.64
COL9A1-210ENST00000493682 PFKPQ01813 784 aa19.07■□□□□ 0.64
COL9A1-210ENST00000493682 PRKCQQ04759 706 aa19.07■□□□□ 0.64
COL9A1-210ENST00000493682 GNL2Q13823 731 aaKnown RBP19.07■□□□□ 0.64
COL9A1-210ENST00000493682 PDIA5Q14554 519 aa19.07■□□□□ 0.64
COL9A1-210ENST00000493682 MAML2Q8IZL2 1156 aaPredicted RBP19.07■□□□□ 0.64
COL9A1-210ENST00000493682 CCDC94Q9BW85 323 aaPredicted RBP19.07■□□□□ 0.64
COL9A1-210ENST00000493682 PTPRHQ9HD43 1115 aa19.07■□□□□ 0.64
COL9A1-210ENST00000493682 TOPORSQ9NS56 1045 aaPredicted RBP19.07■□□□□ 0.64
COL9A1-210ENST00000493682 NOL7Q9UMY1 257 aaKnown RBP19.07■□□□□ 0.64
COL9A1-210ENST00000493682 MRPS23Q9Y3D9 190 aaKnown RBP19.07■□□□□ 0.64
COL9A1-210ENST00000493682 MTF2Q9Y483 593 aaPredicted RBP19.07■□□□□ 0.64
COL9A1-210ENST00000493682 DCHS1Q96JQ0 3298 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 RHOP08100 348 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 OSTNP61366 133 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 SLC5A9Q2M3M2 681 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 ZNF568Q3ZCX4 644 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 SLC8B1Q6J4K2 584 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 DAW1Q8N136 415 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 IGSF22Q8N9C0 903 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 ZNF461Q8TAF7 563 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 SNX29Q8TEQ0 813 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 MCRS1Q96EZ8 462 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 ZMAT2Q96NC0 199 aaKnown RBP19.06■□□□□ 0.64
COL9A1-210ENST00000493682 MRPL4Q9BYD3 311 aaKnown RBP19.06■□□□□ 0.64
COL9A1-210ENST00000493682 BCO2Q9BYV7 579 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 TMEM134Q9H6X4 195 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 SLC38A7Q9NVC3 462 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 PPP4R2Q9NY27 417 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 GDE1Q9NZC3 331 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 STK24Q9Y6E0 443 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 ZNF292O60281 2723 aa19.06■□□□□ 0.64
COL9A1-210ENST00000493682 ARHGEF37A1IGU5 675 aa19.05■□□□□ 0.64
COL9A1-210ENST00000493682 FAM170BA6NMN3 283 aa19.05■□□□□ 0.64
COL9A1-210ENST00000493682 E9PMD0 336 aa19.05■□□□□ 0.64
COL9A1-210ENST00000493682 HIP1RO75146 1068 aa19.05■□□□□ 0.64
COL9A1-210ENST00000493682 HMGN5P82970 282 aaKnown RBP19.05■□□□□ 0.64
COL9A1-210ENST00000493682 ROR1Q01973 937 aa19.05■□□□□ 0.64
COL9A1-210ENST00000493682 PTGDRQ13258 359 aa19.05■□□□□ 0.64
COL9A1-210ENST00000493682 DMP1Q13316 513 aaPredicted RBP19.05■□□□□ 0.64
COL9A1-210ENST00000493682 UBXN2BQ14CS0 331 aa19.05■□□□□ 0.64
COL9A1-210ENST00000493682 VARS2Q5ST30 1063 aaKnown RBP19.05■□□□□ 0.64
COL9A1-210ENST00000493682 TAS1R3Q7RTX0 852 aa19.05■□□□□ 0.64
COL9A1-210ENST00000493682 TARS2Q9BW92 718 aaKnown RBP19.05■□□□□ 0.64
COL9A1-210ENST00000493682 OSBPL6Q9BZF3 934 aa19.05■□□□□ 0.64
COL9A1-210ENST00000493682 RAB34Q9BZG1 259 aa19.05■□□□□ 0.64
COL9A1-210ENST00000493682 AVENQ9NQS1 362 aaPredicted RBP19.05■□□□□ 0.64
COL9A1-210ENST00000493682 SPATA6Q9NWH7 488 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms