RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 RNF169Q8NCN4 708 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 LINC00476Q8WZB0 136 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 KCTD10Q9H3F6 313 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 USP15Q9Y4E8 981 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-218ENST00000493430 EPN1Q9Y6I3 576 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-218ENST00000493430 FPGT-TNNI3KV9GXZ4 949 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 CASKIN1Q8WXD9 1431 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 SCAPERQ9BY12 1400 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 PLXNC1O60486 1568 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 CAMSAP1Q5T5Y3 1602 aa4.5□□□□□ -1.69
PTCD3-218ENST00000493430 MROH1Q8NDA8 1641 aa4.5□□□□□ -1.69
PTCD3-218ENST00000493430 FMN1Q68DA7 1419 aa4.5□□□□□ -1.69
PTCD3-218ENST00000493430 UNC119BA6NIH7 251 aa4.5□□□□□ -1.69
PTCD3-218ENST00000493430 PHF2O75151 1096 aa4.5□□□□□ -1.69
PTCD3-218ENST00000493430 CD38P28907 300 aa4.5□□□□□ -1.69
PTCD3-218ENST00000493430 SEC24CP53992 1094 aa4.5□□□□□ -1.69
PTCD3-218ENST00000493430 UGT8Q16880 541 aa4.5□□□□□ -1.69
PTCD3-218ENST00000493430 CT83Q5H943 113 aa4.5□□□□□ -1.69
PTCD3-218ENST00000493430 PRAMEF14Q5SWL7 426 aa4.5□□□□□ -1.69
PTCD3-218ENST00000493430 ARMC6Q6NXE6 501 aa4.5□□□□□ -1.69
PTCD3-218ENST00000493430 SYCE2Q6PIF2 218 aa4.5□□□□□ -1.69
PTCD3-218ENST00000493430 ZNF480Q8WV37 535 aa4.5□□□□□ -1.69
PTCD3-218ENST00000493430 LEO1Q8WVC0 666 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-218ENST00000493430 CEP95Q96GE4 821 aa4.5□□□□□ -1.69
PTCD3-218ENST00000493430 BBC3Q96PG8 261 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-218ENST00000493430 RNF181Q9P0P0 153 aa4.5□□□□□ -1.69
PTCD3-218ENST00000493430 CCDC18Q5T9S5 1454 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 GCC2Q8IWJ2 1684 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-218ENST00000493430 PJA2O43164 708 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 LMO1P25800 156 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 CANXP27824 592 aaKnown RBP4.49□□□□□ -1.69
PTCD3-218ENST00000493430 PTPN7P35236 360 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 CLK3P49761 638 aaKnown RBP4.49□□□□□ -1.69
PTCD3-218ENST00000493430 FLT3LGP49771 235 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 HSPA2P54652 639 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 C21orf58P58505 322 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 RESTQ13127 1097 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 TP53BP2Q13625 1128 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 FAM47AQ5JRC9 791 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 MFSD14BQ5SR56 506 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 METRNLQ641Q3 311 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 NTN5Q8WTR8 489 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-218ENST00000493430 EAF2Q96CJ1 260 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-218ENST00000493430 ADAM2Q99965 735 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 ADARB2Q9NS39 739 aaKnown RBP4.49□□□□□ -1.69
PTCD3-218ENST00000493430 ATP11BQ9Y2G3 1177 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 MAP3K2Q9Y2U5 619 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 INSL6Q9Y581 213 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 COX11Q9Y6N1 276 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 GPATCH8Q9UKJ3 1502 aaKnown RBP4.49□□□□□ -1.69
PTCD3-218ENST00000493430 PTPN23Q9H3S7 1636 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 CAMSAP2Q08AD1 1489 aa4.49□□□□□ -1.69
PTCD3-218ENST00000493430 PLCH2O75038 1416 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 SETD1BQ9UPS6 1966 aaKnown RBP4.48□□□□□ -1.69
PTCD3-218ENST00000493430 DRGXA6NNA5 263 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 GSG1L2A8MUP6 293 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 SPDEFO95238 335 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 IL12RB1P42701 662 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 CHN2P52757 468 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 CLRN1P58418 232 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 FOXI1Q12951 378 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 PDCD1Q15116 288 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 FSCN1Q16658 493 aaKnown RBP4.48□□□□□ -1.69
PTCD3-218ENST00000493430 SPDYE7PQ495Y7 208 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 PRR16Q569H4 304 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 ATXN7L2Q5T6C5 722 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-218ENST00000493430 AGAP9Q5VTM2 703 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 RD3Q7Z3Z2 195 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 SLC35B2Q8TB61 432 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 SLC9A6Q92581 669 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 USP7Q93009 1102 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 RAX2Q96IS3 184 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 PHACTR3Q96KR7 559 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 ACAP3Q96P50 834 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 MAPRE3Q9UPY8 281 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 MRPL42Q9Y6G3 142 aaKnown RBP4.48□□□□□ -1.69
PTCD3-218ENST00000493430 NCOA2Q15596 1464 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 REREQ9P2R6 1566 aa4.48□□□□□ -1.69
PTCD3-218ENST00000493430 ARID4BQ4LE39 1312 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-218ENST00000493430 ZNF644Q9H582 1327 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-218ENST00000493430 UBR1Q8IWV7 1749 aa4.47□□□□□ -1.69
PTCD3-218ENST00000493430 A0A087X0B3 334 aa4.47□□□□□ -1.69
PTCD3-218ENST00000493430 MARCH11A6NNE9 402 aa4.47□□□□□ -1.69
PTCD3-218ENST00000493430 AKR1B10O60218 316 aa4.47□□□□□ -1.69
PTCD3-218ENST00000493430 PDE8AO60658 829 aa4.47□□□□□ -1.69
PTCD3-218ENST00000493430 ESRRBO95718 433 aa4.47□□□□□ -1.69
PTCD3-218ENST00000493430 FOSP01100 380 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-218ENST00000493430 CFIP05156 583 aa4.47□□□□□ -1.69
PTCD3-218ENST00000493430 SNRPA1P09661 255 aaKnown RBP4.47□□□□□ -1.69
PTCD3-218ENST00000493430 EGR2P11161 476 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-218ENST00000493430 MYCLP1P12525 358 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-218ENST00000493430 BPIP17213 487 aa4.47□□□□□ -1.69
PTCD3-218ENST00000493430 TYRP1P17643 537 aa4.47□□□□□ -1.69
PTCD3-218ENST00000493430 CXCR5P32302 372 aa4.47□□□□□ -1.69
PTCD3-218ENST00000493430 SESN3P58005 492 aa4.47□□□□□ -1.69
PTCD3-218ENST00000493430 DHCR24Q15392 516 aa4.47□□□□□ -1.69
PTCD3-218ENST00000493430 FBXO42Q6P3S6 717 aa4.47□□□□□ -1.69
PTCD3-218ENST00000493430 FAM180AQ6UWF9 173 aa4.47□□□□□ -1.69
PTCD3-218ENST00000493430 KIAA0907Q7Z7F0 614 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms