RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 KIF12Q96FN5 646 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 UROC1Q96N76 676 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 PAAF1Q9BRP4 392 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 CBWD1Q9BRT8 395 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 FAM213AQ9BRX8 229 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 ZBP1Q9H171 429 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 PCIF1Q9H4Z3 704 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 GOLGA2P5Q9HBQ8 144 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 NGRNQ9NPE2 291 aaKnown RBP13.91□□□□□ -0.18
CLIP2-209ENST00000493166 ADAM28Q9UKQ2 775 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 MTCL1Q9Y4B5 1905 aaKnown RBP13.91□□□□□ -0.18
CLIP2-209ENST00000493166 BRWD1Q9NSI6 2320 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 TULP1O00294 542 aaPredicted RBP13.9□□□□□ -0.18
CLIP2-209ENST00000493166 KIAA0391O15091 583 aaKnown RBP13.9□□□□□ -0.18
CLIP2-209ENST00000493166 XPOTO43592 962 aaKnown RBP13.9□□□□□ -0.18
CLIP2-209ENST00000493166 PRPF40AO75400 957 aaKnown RBP13.9□□□□□ -0.18
CLIP2-209ENST00000493166 TADA2AO75478 443 aa13.9□□□□□ -0.18
CLIP2-209ENST00000493166 RHOBTB3O94955 611 aa13.9□□□□□ -0.18
CLIP2-209ENST00000493166 KIF4AO95239 1232 aa13.9□□□□□ -0.18
CLIP2-209ENST00000493166 LDHAP00338 332 aaKnown RBP13.9□□□□□ -0.18
CLIP2-209ENST00000493166 CTSAP10619 480 aa13.9□□□□□ -0.18
CLIP2-209ENST00000493166 CLCNKBP51801 687 aa13.9□□□□□ -0.18
CLIP2-209ENST00000493166 SOX4Q06945 474 aaPredicted RBP13.9□□□□□ -0.18
CLIP2-209ENST00000493166 SPAG1Q07617 926 aa13.9□□□□□ -0.18
CLIP2-209ENST00000493166 KCNB1Q14721 858 aa13.9□□□□□ -0.18
CLIP2-209ENST00000493166 KNOP1Q1ED39 458 aaKnown RBP13.9□□□□□ -0.18
CLIP2-209ENST00000493166 HS2ST1Q7LGA3 356 aa13.9□□□□□ -0.18
CLIP2-209ENST00000493166 ADGRD2Q7Z7M1 963 aa13.9□□□□□ -0.18
CLIP2-209ENST00000493166 CD302Q8IX05 232 aa13.9□□□□□ -0.18
CLIP2-209ENST00000493166 VN1R3Q9BXE9 311 aa13.9□□□□□ -0.18
CLIP2-209ENST00000493166 TLE6Q9H808 572 aa13.9□□□□□ -0.18
CLIP2-209ENST00000493166 C5orf42Q9H799 3197 aa13.9□□□□□ -0.18
CLIP2-209ENST00000493166 SCN1AP35498 2009 aa13.9□□□□□ -0.18
CLIP2-209ENST00000493166 SF3B1O75533 1304 aaKnown RBP eCLIP13.9□□□□□ -0.193e-6■■■■■ 137.9
CLIP2-209ENST00000493166 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.89□□□□□ -0.19
CLIP2-209ENST00000493166 GOLGA8IPA6NC78 632 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 GOLGA8JA6NMD2 632 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 TGFB1I1O43294 461 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 EXTL3O43909 919 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 IL18RAPO95256 599 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 SMC2O95347 1197 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 CXCL14O95715 111 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 SOD2P04179 222 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 URODP06132 367 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 NRIP1P48552 1158 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 SNRPFP62306 86 aaKnown RBP13.89□□□□□ -0.19
CLIP2-209ENST00000493166 POU5F1Q01860 360 aaKnown RBP13.89□□□□□ -0.19
CLIP2-209ENST00000493166 HYAL1Q12794 435 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 UPP1Q16831 310 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 FUT10Q6P4F1 479 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 CRELD2Q6UXH1 353 aaPredicted RBP13.89□□□□□ -0.19
CLIP2-209ENST00000493166 RBM23Q86U06 439 aaKnown RBP13.89□□□□□ -0.19
CLIP2-209ENST00000493166 GPD1LQ8N335 351 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 DDX27Q96GQ7 796 aaKnown RBP13.89□□□□□ -0.19
CLIP2-209ENST00000493166 GBP4Q96PP9 640 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 TSPAN18Q96SJ8 248 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 HERC2P3Q9BVR0 1158 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 IGFLR1Q9H665 355 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 PRDM6Q9NQX0 595 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 AGPAT3Q9NRZ7 376 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 RMND1Q9NWS8 449 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 RBAKQ9NYW8 714 aaPredicted RBP13.89□□□□□ -0.19
CLIP2-209ENST00000493166 HSPBP1Q9NZL4 362 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 CGNQ9P2M7 1197 aaKnown RBP13.89□□□□□ -0.19
CLIP2-209ENST00000493166 TUBGCP4Q9UGJ1 667 aa13.89□□□□□ -0.19
CLIP2-209ENST00000493166 UBQLN1Q9UMX0 589 aaKnown RBP13.89□□□□□ -0.19
CLIP2-209ENST00000493166 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.89□□□□□ -0.19
CLIP2-209ENST00000493166 TSC2P49815 1807 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 SPTBN5Q9NRC6 3674 aaKnown RBP13.88□□□□□ -0.19
CLIP2-209ENST00000493166 C2orf71A6NGG8 1288 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 HIDE1A8MVS5 230 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 TMEM189-UBE2V1I3L0A0 370 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 PODXLO00592 558 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 PER2O15055 1255 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 CLIC2O15247 247 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 NCK2O43639 380 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 B3GAT3O94766 335 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 KIF20AO95235 890 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 ADRB2P07550 413 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 NFICP08651 508 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 RPL9P32969 192 aaKnown RBP13.88□□□□□ -0.19
CLIP2-209ENST00000493166 GTF2F1P35269 517 aaKnown RBP eCLIP13.88□□□□□ -0.19
CLIP2-209ENST00000493166 GLUD2P49448 558 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 TMEM132DQ14C87 1099 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 JADE1Q6IE81 842 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 KIAA1841Q6NSI8 718 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 DCLRE1AQ6PJP8 1040 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 CLEC17AQ6ZS10 378 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 EP400NLQ6ZTU2 488 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 BRSK2Q8IWQ3 736 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 RNF168Q8IYW5 571 aaPredicted RBP13.88□□□□□ -0.19
CLIP2-209ENST00000493166 MRPL43Q8N983 215 aaKnown RBP13.88□□□□□ -0.19
CLIP2-209ENST00000493166 ZSWIM2Q8NEG5 633 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 GOLGA5Q8TBA6 731 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 AUTS2Q8WXX7 1259 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 HLA-CQ95604 372 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 SMARCE1Q969G3 411 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 GSDMAQ96QA5 445 aa13.88□□□□□ -0.19
CLIP2-209ENST00000493166 CDCA3Q99618 268 aaPredicted RBP13.88□□□□□ -0.19
CLIP2-209ENST00000493166 GPR62Q9BZJ7 368 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms