RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 ZNF771Q7L3S4 317 aaPredicted RBP14.51□□□□□ -0.09
HDAC3-213ENST00000492506 OTUD6AQ7L8S5 288 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 NPAS3Q8IXF0 933 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 TRIM22Q8IYM9 498 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 FAM177A1Q8N128 213 aaPredicted RBP14.51□□□□□ -0.09
HDAC3-213ENST00000492506 SPRYD3Q8NCJ5 442 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 HASPINQ8TF76 798 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 ATRIPQ8WXE1 791 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 ANKRD7Q92527 254 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 DYDC2Q96IM9 177 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 TIGD1Q96MW7 591 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 TTPALQ9BTX7 342 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 NFKBIZQ9BYH8 718 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 TRIM6Q9C030 488 aaPredicted RBP14.51□□□□□ -0.09
HDAC3-213ENST00000492506 CXCL16Q9H2A7 254 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 ZSWIM4Q9H7M6 989 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 PARD6AQ9NPB6 346 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 PRMT8Q9NR22 394 aaPredicted RBP14.51□□□□□ -0.09
HDAC3-213ENST00000492506 HCFC1R1Q9NWW0 138 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 TICRRQ7Z2Z1 1910 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 PRR5-ARHGAP8B1AHC4 643 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 PTGESO14684 152 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 TBX3O15119 743 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 CDC45O75419 566 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 KIF4AO95239 1232 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 NPTXRO95502 500 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 GLRA2P23416 452 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 RPS9P46781 194 aaKnown RBP14.5□□□□□ -0.09
HDAC3-213ENST00000492506 ARHGAP8P85298 464 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 CYP4A11Q02928 519 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 LMNB2Q03252 620 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 NCBP1Q09161 790 aaKnown RBP14.5□□□□□ -0.09
HDAC3-213ENST00000492506 TUSC3Q13454 348 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 TOB2Q14106 344 aaPredicted RBP14.5□□□□□ -0.09
HDAC3-213ENST00000492506 TFDP1Q14186 410 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 NAB2Q15742 525 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 PSMD5Q16401 504 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 LIN9Q5TKA1 542 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 KRT25Q7Z3Z0 450 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 HACE1Q8IYU2 909 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 ZNF687Q8N1G0 1237 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 PHF20Q9BVI0 1012 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 PLA2G2FQ9BZM2 168 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 DNMT3BQ9UBC3 853 aaKnown RBP14.5□□□□□ -0.09
HDAC3-213ENST00000492506 KCNJ14Q9UNX9 436 aa14.5□□□□□ -0.09
HDAC3-213ENST00000492506 PDCD11Q14690 1871 aaKnown RBP14.49□□□□□ -0.09
HDAC3-213ENST00000492506 DCDC2BA2VCK2 349 aa14.49□□□□□ -0.09
HDAC3-213ENST00000492506 TDGF1P13385 188 aa14.49□□□□□ -0.09
HDAC3-213ENST00000492506 GCFC2P16383 781 aaKnown RBP14.49□□□□□ -0.09
HDAC3-213ENST00000492506 CBX1P83916 185 aa14.49□□□□□ -0.09
HDAC3-213ENST00000492506 RAB33AQ14088 237 aa14.49□□□□□ -0.09
HDAC3-213ENST00000492506 AXDND1Q5T1B0 1012 aaPredicted RBP14.49□□□□□ -0.09
HDAC3-213ENST00000492506 NCAPH2Q6IBW4 605 aa14.49□□□□□ -0.09
HDAC3-213ENST00000492506 TPRG1Q6ZUI0 275 aa14.49□□□□□ -0.09
HDAC3-213ENST00000492506 NEK8Q86SG6 692 aa14.49□□□□□ -0.09
HDAC3-213ENST00000492506 POTEDQ86YR6 584 aa14.49□□□□□ -0.09
HDAC3-213ENST00000492506 SLC7A14Q8TBB6 771 aa14.49□□□□□ -0.09
HDAC3-213ENST00000492506 NELL2Q99435 816 aa14.49□□□□□ -0.09
HDAC3-213ENST00000492506 YY1AP1Q9H869 796 aa14.49□□□□□ -0.09
HDAC3-213ENST00000492506 PARP2Q9UGN5 583 aa14.49□□□□□ -0.09
HDAC3-213ENST00000492506 KCNH3Q9ULD8 1083 aa14.49□□□□□ -0.09
HDAC3-213ENST00000492506 POLIQ9UNA4 740 aa14.49□□□□□ -0.09
HDAC3-213ENST00000492506 CASTOR2A6NHX0 329 aa14.48□□□□□ -0.09
HDAC3-213ENST00000492506 TBC1D4O60343 1298 aa14.48□□□□□ -0.09
HDAC3-213ENST00000492506 XYLBO75191 536 aa14.48□□□□□ -0.09
HDAC3-213ENST00000492506 ECI2O75521 394 aa14.48□□□□□ -0.09
HDAC3-213ENST00000492506 LYPLA2O95372 231 aa14.48□□□□□ -0.09
HDAC3-213ENST00000492506 IGFBP6P24592 240 aaPredicted RBP14.48□□□□□ -0.09
HDAC3-213ENST00000492506 MTAPQ13126 283 aa14.48□□□□□ -0.09
HDAC3-213ENST00000492506 RABEP1Q15276 862 aa14.48□□□□□ -0.09
HDAC3-213ENST00000492506 SLC5A9Q2M3M2 681 aa14.48□□□□□ -0.09
HDAC3-213ENST00000492506 PABPC1LQ4VXU2 614 aaKnown RBP14.48□□□□□ -0.09
HDAC3-213ENST00000492506 CEP57Q86XR8 500 aa14.48□□□□□ -0.09
HDAC3-213ENST00000492506 TPH2Q8IWU9 490 aa14.48□□□□□ -0.09
HDAC3-213ENST00000492506 HSD17B14Q9BPX1 270 aa14.48□□□□□ -0.09
HDAC3-213ENST00000492506 RTKNQ9BST9 563 aa14.48□□□□□ -0.09
HDAC3-213ENST00000492506 RBSNQ9H1K0 784 aa14.48□□□□□ -0.09
HDAC3-213ENST00000492506 CDV3Q9UKY7 258 aaKnown RBP14.48□□□□□ -0.09
HDAC3-213ENST00000492506 CCDC194A0A1B0GVG4 234 aa14.47□□□□□ -0.09
HDAC3-213ENST00000492506 TTLL13PA6NNM8 815 aa14.47□□□□□ -0.09
HDAC3-213ENST00000492506 CCNT1O60563 726 aaKnown RBP14.47□□□□□ -0.09
HDAC3-213ENST00000492506 DGAT1O75907 488 aa14.47□□□□□ -0.09
HDAC3-213ENST00000492506 ADRB1P08588 477 aa14.47□□□□□ -0.09
HDAC3-213ENST00000492506 FGFR3P22607 806 aa14.47□□□□□ -0.09
HDAC3-213ENST00000492506 OR1D2P34982 312 aa14.47□□□□□ -0.09
HDAC3-213ENST00000492506 EARS2Q5JPH6 523 aaKnown RBP14.47□□□□□ -0.09
HDAC3-213ENST00000492506 PPP4R3CPQ6ZMV5 832 aa14.47□□□□□ -0.09
HDAC3-213ENST00000492506 ING5Q8WYH8 240 aa14.47□□□□□ -0.09
HDAC3-213ENST00000492506 SECISBP2LQ93073 1101 aaKnown RBP14.47□□□□□ -0.09
HDAC3-213ENST00000492506 FAM126AQ9BYI3 521 aaPredicted RBP14.47□□□□□ -0.09
HDAC3-213ENST00000492506 HEBP1Q9NRV9 189 aa14.47□□□□□ -0.09
HDAC3-213ENST00000492506 ANKEF1Q9NU02 776 aa14.47□□□□□ -0.09
HDAC3-213ENST00000492506 CGNQ9P2M7 1197 aaKnown RBP14.47□□□□□ -0.09
HDAC3-213ENST00000492506 CNOT1A5YKK6 2376 aaKnown RBP14.46□□□□□ -0.09
HDAC3-213ENST00000492506 NRG2O14511 850 aaPredicted RBP14.46□□□□□ -0.09
HDAC3-213ENST00000492506 CTIFO43310 598 aaKnown RBP14.46□□□□□ -0.09
HDAC3-213ENST00000492506 CHRM1P11229 460 aaPredicted RBP14.46□□□□□ -0.09
HDAC3-213ENST00000492506 FCARP24071 287 aa14.46□□□□□ -0.09
HDAC3-213ENST00000492506 ADCY1Q08828 1119 aa14.46□□□□□ -0.09
HDAC3-213ENST00000492506 TANGO2Q6ICL3 276 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms