RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 ATG4AQ8WYN0 398 aa17.23■□□□□ 0.35
SEMA4D-220ENST00000492386 C17orf75Q9HAS0 396 aa17.23■□□□□ 0.35
SEMA4D-220ENST00000492386 AVENQ9NQS1 362 aaPredicted RBP17.23■□□□□ 0.35
SEMA4D-220ENST00000492386 MYPNQ86TC9 1320 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 PARP14Q460N5 1801 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 CCT8L1PA6NM43 557 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 SCP2P22307 547 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 CHKAP35790 457 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 LONRF1Q17RB8 773 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 USP37Q86T82 979 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 RDM1Q8NG50 284 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 ZNF516Q92618 1163 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 WNT10BO00744 389 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 ZC3H11AO75152 810 aaKnown RBP eCLIP17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 ITIH2P19823 946 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 RRM1P23921 792 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 ENPEPQ07075 957 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 PTK6Q13882 451 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 ARHGEF16Q5VV41 709 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 FUKQ8N0W3 1084 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 CEP170P1Q96L14 293 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 SENP7Q9BQF6 1050 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 FAM213AQ9BRX8 229 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 PCDHA10Q9Y5I2 948 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 DOCK5Q9H7D0 1870 aa17.22■□□□□ 0.35
SEMA4D-220ENST00000492386 HNRNPDLO14979 420 aaKnown RBP17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 ATP2C2O75185 946 aa17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 ACSL3O95573 720 aa17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 GARTP22102 1010 aa17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 ITIH4Q14624 930 aa17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 LLGL2Q6P1M3 1020 aa17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 TAOK1Q7L7X3 1001 aa17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 TAS1R3Q7RTX0 852 aa17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 RTKN2Q8IZC4 609 aa17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 CPA5Q8WXQ8 436 aa17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 DDX27Q96GQ7 796 aaKnown RBP17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 SNF8Q96H20 258 aa17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 PDLIM7Q9NR12 457 aa17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 HAUS2Q9NVX0 235 aa17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 GABBR1Q9UBS5 961 aa17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 ASIC3Q9UHC3 531 aa17.21■□□□□ 0.35
SEMA4D-220ENST00000492386 BRDTQ58F21 947 aaPredicted RBP17.21■□□□□ 0.34
SEMA4D-220ENST00000492386 SYDE1Q6ZW31 735 aaPredicted RBP17.21■□□□□ 0.34
SEMA4D-220ENST00000492386 OTUD6AQ7L8S5 288 aa17.21■□□□□ 0.34
SEMA4D-220ENST00000492386 PHLDB2Q86SQ0 1253 aa17.21■□□□□ 0.34
SEMA4D-220ENST00000492386 TAX1BP1Q86VP1 789 aa17.21■□□□□ 0.34
SEMA4D-220ENST00000492386 ANKS4BQ8N8V4 417 aa17.21■□□□□ 0.34
SEMA4D-220ENST00000492386 AGBL3Q8NEM8 1001 aa17.21■□□□□ 0.34
SEMA4D-220ENST00000492386 DCLK3Q9C098 648 aa17.21■□□□□ 0.34
SEMA4D-220ENST00000492386 CCDC113Q9H0I3 377 aa17.21■□□□□ 0.34
SEMA4D-220ENST00000492386 C1orf112Q9NSG2 853 aa17.21■□□□□ 0.34
SEMA4D-220ENST00000492386 DNAJC8O75937 253 aaPredicted RBP17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 MYBL1P10243 752 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 SLC1A1P43005 524 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 IFNAR2P48551 515 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 XRCC4Q13426 336 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 VSIG10LQ86VR7 867 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 FAM81BQ96LP2 452 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 SERPINB12Q96P63 405 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 XPNPEP1Q9NQW7 623 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 R3HDM2Q9Y2K5 976 aaKnown RBP17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 PCDHB2Q9Y5E7 798 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 CYP1A1P04798 512 aaPredicted RBP17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 MAN1A1P33908 653 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 ITGA8P53708 1063 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 CLDN10P78369 228 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 C2CD6Q53TS8 623 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 CYB5D1Q6P9G0 228 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 NLRX1Q86UT6 975 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 ZNF677Q86XU0 584 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 IPO4Q8TEX9 1081 aaKnown RBP17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 MAIP1Q8WWC4 291 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 ELAC2Q9BQ52 826 aaKnown RBP17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 A1CFQ9NQ94 594 aaKnown RBP17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 NEU2Q9Y3R4 380 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 TELO2Q9Y4R8 837 aa17.2■□□□□ 0.34
SEMA4D-220ENST00000492386 UMODL1Q5DID0 1318 aa17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 TTC4O95801 387 aa17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 VIMP08670 466 aaKnown RBP17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 RTP1P59025 263 aa17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 CENPCQ03188 943 aa17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 BAATQ14032 418 aaPredicted RBP17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 TRIP13Q15645 432 aaPredicted RBP17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 DAB2IPQ5VWQ8 1189 aa17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 MON1BQ7L1V2 547 aa17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 TTLL6Q8N841 843 aa17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 ARHGEF2Q92974 986 aaKnown RBP17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 GPRASP2Q96D09 838 aa17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 TRIM11Q96F44 468 aa17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 SGSM3Q96HU1 749 aa17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 WNK4Q96J92 1243 aa17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 TEPSINQ96N21 525 aa17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 CD248Q9HCU0 757 aa17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 RIPK3Q9Y572 518 aa17.19■□□□□ 0.34
SEMA4D-220ENST00000492386 O00370 1275 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 CREB1P16220 341 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 WNT7BP56706 349 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 SF3A3Q12874 501 aaKnown RBP eCLIP17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 PTP4A2Q12974 167 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 KLF1Q13351 362 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms