RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 TCF4P15884 667 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 CD58P19256 250 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 LIG3P49916 1009 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 SKOR1P84550 965 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 CCDC38Q502W7 563 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 SCARA5Q6ZMJ2 495 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 MCPH1Q8NEM0 835 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 SPIRE2Q8WWL2 714 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 BBXQ8WY36 941 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-220ENST00000492280 RNF25Q96BH1 459 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-220ENST00000492280 MSTO1Q9BUK6 570 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 RBAKQ9NYW8 714 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-220ENST00000492280 GTF3C4Q9UKN8 822 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 PNMA2Q9UL42 364 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 TTC7AQ9ULT0 858 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-220ENST00000492280 SPATA31C2B4DYI2 1134 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 CSDE1O75534 798 aaKnown RBP13.32□□□□□ -0.28
HMGN1-220ENST00000492280 OATP04181 439 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 MAPK4P31152 587 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 PSMC4P43686 418 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 SIX1Q15475 284 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-220ENST00000492280 CLEC16AQ2KHT3 1053 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 GNPTABQ3T906 1256 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 MIS18BP1Q6P0N0 1132 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 GADL1Q6ZQY3 521 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 ANKS1BQ7Z6G8 1248 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 SLC13A5Q86YT5 568 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-220ENST00000492280 DEPTORQ8TB45 409 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 PCYT2Q99447 389 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 NTPCRQ9BSD7 190 aaKnown RBP13.32□□□□□ -0.28
HMGN1-220ENST00000492280 FAM114A2Q9NRY5 505 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 MAP3K20Q9NYL2 800 aaKnown RBP13.32□□□□□ -0.28
HMGN1-220ENST00000492280 ZNF112Q9UJU3 913 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 R3HDM2Q9Y2K5 976 aaKnown RBP13.32□□□□□ -0.28
HMGN1-220ENST00000492280 AFG3L2Q9Y4W6 797 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 EVPLQ92817 2033 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 MYPNQ86TC9 1320 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 CYP1A2P05177 515 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 STRN3Q13033 797 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 SLC29A2Q14542 456 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 XKR3Q5GH77 459 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 WDR78Q5VTH9 848 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 CD302Q8IX05 232 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 EPS8L3Q8TE67 593 aaKnown RBP13.32□□□□□ -0.28
HMGN1-220ENST00000492280 SEC14L1Q92503 715 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 RAB17Q9H0T7 212 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 NUB1Q9Y5A7 615 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 PCDHB4Q9Y5E5 795 aa13.32□□□□□ -0.28
HMGN1-220ENST00000492280 K7ERI5 159 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 ECM2O94769 699 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-220ENST00000492280 SRGAP2CP0DJJ0 459 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 GZMAP12544 262 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 SCP2P22307 547 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 CAPSQ13938 189 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 ATP13A4Q4VNC1 1196 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 BRDTQ58F21 947 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-220ENST00000492280 ACAD10Q6JQN1 1059 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 MMS22LQ6ZRQ5 1243 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 CCDC50Q8IVM0 306 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 CLMNQ96JQ2 1002 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 DDX23Q9BUQ8 820 aaKnown RBP13.31□□□□□ -0.28
HMGN1-220ENST00000492280 TIPINQ9BVW5 301 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 ADAMTS5Q9UNA0 930 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 FAM169AQ9Y6X4 670 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 MIF4GDA9UHW6 222 aaKnown RBP13.31□□□□□ -0.28
HMGN1-220ENST00000492280 HMGB1P1B2RPK0 211 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-220ENST00000492280 PI4K2BG5E9Z4 385 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 MAPK13O15264 365 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 ARIH2O95376 493 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 MDH1P40925 334 aaKnown RBP13.31□□□□□ -0.28
HMGN1-220ENST00000492280 ORC1Q13415 861 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 STXBP2Q15833 593 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 PTGISQ16647 500 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 MCOLN2Q8IZK6 566 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 CEP120Q8N960 986 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 TMC2Q8TDI7 906 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 TCHPQ9BT92 498 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 SNCAIPQ9Y6H5 919 aa13.31□□□□□ -0.28
HMGN1-220ENST00000492280 PAPPA2Q9BXP8 1791 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 EBAG9O00559 213 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 EXTL3O43909 919 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 UNGP13051 313 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-220ENST00000492280 COILP38432 576 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-220ENST00000492280 ALDH5A1P51649 535 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-220ENST00000492280 QPCTQ16769 361 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 ZACNQ401N2 412 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 PSPC1Q8WXF1 523 aaKnown RBP13.3□□□□□ -0.28
HMGN1-220ENST00000492280 SLC7A3Q8WY07 619 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 COPS5Q92905 334 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 OTUD5Q96G74 571 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 SENP7Q9BQF6 1050 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 CCDC113Q9H0I3 377 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 MGAMO43451 1857 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 GSTTP1A0A1W2PQM5 241 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 DDNO94850 711 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-220ENST00000492280 ACSL3O95573 720 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 GGPS1O95749 300 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 CST3P01034 146 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-220ENST00000492280 C4BPAP04003 597 aaKnown RBP13.3□□□□□ -0.28
HMGN1-220ENST00000492280 CTNNA2P26232 953 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms