RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 CXCL8P10145 99 aa26.95■■□□□ 1.9
UPF3A-209ENST00000492270 KCNE1P15382 129 aa26.95■■□□□ 1.9
UPF3A-209ENST00000492270 RPL17P18621 184 aaKnown RBP26.95■■□□□ 1.9
UPF3A-209ENST00000492270 UPP1Q16831 310 aa26.95■■□□□ 1.9
UPF3A-209ENST00000492270 FAM171A1Q5VUB5 890 aa26.95■■□□□ 1.9
UPF3A-209ENST00000492270 CD300LGQ6UXG3 332 aa26.95■■□□□ 1.9
UPF3A-209ENST00000492270 GLYCTKQ8IVS8 523 aa26.95■■□□□ 1.9
UPF3A-209ENST00000492270 TMEM130Q8N3G9 435 aa26.95■■□□□ 1.9
UPF3A-209ENST00000492270 C18orf25Q96B23 403 aaPredicted RBP26.95■■□□□ 1.9
UPF3A-209ENST00000492270 FBXL18Q96ME1 805 aa26.95■■□□□ 1.9
UPF3A-209ENST00000492270 POP1Q99575 1024 aaKnown RBP26.95■■□□□ 1.9
UPF3A-209ENST00000492270 ST6GALNAC4Q9H4F1 302 aa26.95■■□□□ 1.9
UPF3A-209ENST00000492270 TBC1D7Q9P0N9 293 aa26.95■■□□□ 1.9
UPF3A-209ENST00000492270 ANKRD63C9JTQ0 380 aa26.94■■□□□ 1.9
UPF3A-209ENST00000492270 FAM189A1O60320 539 aa26.94■■□□□ 1.9
UPF3A-209ENST00000492270 ADH1AP07327 375 aa26.94■■□□□ 1.9
UPF3A-209ENST00000492270 MYBP10242 640 aa26.94■■□□□ 1.9
UPF3A-209ENST00000492270 IDEP14735 1019 aa26.94■■□□□ 1.9
UPF3A-209ENST00000492270 SCP2P22307 547 aa26.94■■□□□ 1.9
UPF3A-209ENST00000492270 ZNF720Q7Z2F6 126 aa26.94■■□□□ 1.9
UPF3A-209ENST00000492270 CEP57Q86XR8 500 aa26.94■■□□□ 1.9
UPF3A-209ENST00000492270 KCNG4Q8TDN1 519 aa26.94■■□□□ 1.9
UPF3A-209ENST00000492270 PHF7Q9BWX1 381 aaPredicted RBP26.94■■□□□ 1.9
UPF3A-209ENST00000492270 ADAM7Q9H2U9 754 aa26.94■■□□□ 1.9
UPF3A-209ENST00000492270 PCDHA7Q9UN72 937 aa26.94■■□□□ 1.9
UPF3A-209ENST00000492270 TMEM189-UBE2V1I3L0A0 370 aa26.93■■□□□ 1.9
UPF3A-209ENST00000492270 PPP1R37O75864 691 aa26.93■■□□□ 1.9
UPF3A-209ENST00000492270 B3GAT3O94766 335 aa26.93■■□□□ 1.9
UPF3A-209ENST00000492270 SPAG1Q07617 926 aa26.93■■□□□ 1.9
UPF3A-209ENST00000492270 DCLRE1AQ6PJP8 1040 aa26.93■■□□□ 1.9
UPF3A-209ENST00000492270 DHX58Q96C10 678 aa26.93■■□□□ 1.9
UPF3A-209ENST00000492270 UROC1Q96N76 676 aa26.93■■□□□ 1.9
UPF3A-209ENST00000492270 TTPALQ9BTX7 342 aa26.93■■□□□ 1.9
UPF3A-209ENST00000492270 FGFBP2Q9BYJ0 223 aa26.93■■□□□ 1.9
UPF3A-209ENST00000492270 MRPL44Q9H9J2 332 aaKnown RBP26.93■■□□□ 1.9
UPF3A-209ENST00000492270 SLC38A7Q9NVC3 462 aa26.93■■□□□ 1.9
UPF3A-209ENST00000492270 LOC730098B7Z3J9 87 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 I3L4J1 428 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 CLTAP09496 248 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 GAP43P17677 238 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 BRCC3P46736 316 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 ME1P48163 572 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 ITIH3Q06033 890 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 ATL3Q6DD88 541 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 TMC5Q6UXY8 1006 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 PALB2Q86YC2 1186 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 RPGRIP1Q96KN7 1286 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 MSTO1Q9BUK6 570 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 STRA6Q9BX79 667 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 POMKQ9H5K3 350 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 MAN1C1Q9NR34 630 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 SEL1LQ9UBV2 794 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 TUBGCP4Q9UGJ1 667 aa26.92■■□□□ 1.9
UPF3A-209ENST00000492270 A0A0B4J269 797 aa26.91■■□□□ 1.9
UPF3A-209ENST00000492270 FRMD3A2A2Y4 597 aa26.91■■□□□ 1.9
UPF3A-209ENST00000492270 SPDYE4A6NLX3 237 aa26.91■■□□□ 1.9
UPF3A-209ENST00000492270 PODXLO00592 558 aa26.91■■□□□ 1.9
UPF3A-209ENST00000492270 OGTO15294 1046 aa26.91■■□□□ 1.9
UPF3A-209ENST00000492270 SPATA31D3P0C874 917 aa26.91■■□□□ 1.9
UPF3A-209ENST00000492270 SP100P23497 879 aaPredicted RBP26.91■■□□□ 1.9
UPF3A-209ENST00000492270 CASP5P51878 434 aa26.91■■□□□ 1.9
UPF3A-209ENST00000492270 KCNA1Q09470 495 aa26.91■■□□□ 1.9
UPF3A-209ENST00000492270 CES5AQ6NT32 575 aa26.91■■□□□ 1.9
UPF3A-209ENST00000492270 SPATA31D4Q6ZUB0 917 aa26.91■■□□□ 1.9
UPF3A-209ENST00000492270 LNX1Q8TBB1 728 aaPredicted RBP26.91■■□□□ 1.9
UPF3A-209ENST00000492270 SFXN1Q9H9B4 322 aa26.91■■□□□ 1.9
UPF3A-209ENST00000492270 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.91■■□□□ 1.9
UPF3A-209ENST00000492270 PANK4Q9NVE7 773 aa26.91■■□□□ 1.9
UPF3A-209ENST00000492270 FNIP2Q9P278 1114 aa26.91■■□□□ 1.9
UPF3A-209ENST00000492270 CFAP45Q9UL16 551 aa26.91■■□□□ 1.9
UPF3A-209ENST00000492270 TTC26A0AVF1 554 aa26.9■■□□□ 1.9
UPF3A-209ENST00000492270 GLUD1P00367 558 aa26.9■■□□□ 1.9
UPF3A-209ENST00000492270 ABCD1P33897 745 aa26.9■■□□□ 1.9
UPF3A-209ENST00000492270 ELAVL2Q12926 359 aaKnown RBP26.9■■□□□ 1.9
UPF3A-209ENST00000492270 ENOX2Q16206 610 aaKnown RBP26.9■■□□□ 1.9
UPF3A-209ENST00000492270 PSMD5Q16401 504 aa26.9■■□□□ 1.9
UPF3A-209ENST00000492270 HERC4Q5GLZ8 1057 aaPredicted RBP26.9■■□□□ 1.9
UPF3A-209ENST00000492270 GPR65Q8IYL9 337 aa26.9■■□□□ 1.9
UPF3A-209ENST00000492270 PIK3R5Q8WYR1 880 aa26.9■■□□□ 1.9
UPF3A-209ENST00000492270 HVCN1Q96D96 273 aa26.9■■□□□ 1.9
UPF3A-209ENST00000492270 TNMDQ9H2S6 317 aa26.9■■□□□ 1.9
UPF3A-209ENST00000492270 OLFML3Q9NRN5 406 aa26.9■■□□□ 1.9
UPF3A-209ENST00000492270 KBTBD4Q9NVX7 518 aa26.9■■□□□ 1.9
UPF3A-209ENST00000492270 RCOR1Q9UKL0 485 aa26.9■■□□□ 1.9
UPF3A-209ENST00000492270 LACTBL1A8MY62 500 aa26.89■■□□□ 1.9
UPF3A-209ENST00000492270 PI4K2BG5E9Z4 385 aa26.89■■□□□ 1.9
UPF3A-209ENST00000492270 GCNT3O95395 438 aa26.89■■□□□ 1.9
UPF3A-209ENST00000492270 TKTP29401 623 aaKnown RBP26.89■■□□□ 1.9
UPF3A-209ENST00000492270 RESP18Q5W5W9 173 aa26.89■■□□□ 1.9
UPF3A-209ENST00000492270 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.89■■□□□ 1.9
UPF3A-209ENST00000492270 RNF135Q8IUD6 432 aa26.89■■□□□ 1.9
UPF3A-209ENST00000492270 DDX27Q96GQ7 796 aaKnown RBP26.89■■□□□ 1.9
UPF3A-209ENST00000492270 CLSTN3Q9BQT9 956 aa26.89■■□□□ 1.9
UPF3A-209ENST00000492270 TGM5O43548 720 aa26.88■■□□□ 1.89
UPF3A-209ENST00000492270 FGFR3P22607 806 aa26.88■■□□□ 1.89
UPF3A-209ENST00000492270 CREMQ03060 361 aa26.88■■□□□ 1.89
UPF3A-209ENST00000492270 PPP2R3AQ06190 1150 aa26.88■■□□□ 1.89
UPF3A-209ENST00000492270 KIF12Q96FN5 646 aa26.88■■□□□ 1.89
UPF3A-209ENST00000492270 TRIM9Q9C026 710 aa26.88■■□□□ 1.89
UPF3A-209ENST00000492270 CUEDC2Q9H467 287 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms