RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 GOLGA2P5Q9HBQ8 144 aa25.32■■□□□ 1.64
CPNE9-204ENST00000491802 SLC38A7Q9NVC3 462 aa25.32■■□□□ 1.64
CPNE9-204ENST00000491802 CPSF3Q9UKF6 684 aaKnown RBP25.32■■□□□ 1.64
CPNE9-204ENST00000491802 TTC26A0AVF1 554 aa25.31■■□□□ 1.64
CPNE9-204ENST00000491802 HIDE1A8MVS5 230 aa25.31■■□□□ 1.64
CPNE9-204ENST00000491802 RPN1P04843 607 aaKnown RBP25.31■■□□□ 1.64
CPNE9-204ENST00000491802 GTF2F1P35269 517 aaKnown RBP eCLIP25.31■■□□□ 1.64
CPNE9-204ENST00000491802 LTBRP36941 435 aa25.31■■□□□ 1.64
CPNE9-204ENST00000491802 NRIP1P48552 1158 aa25.31■■□□□ 1.64
CPNE9-204ENST00000491802 ACOT2P49753 483 aa25.31■■□□□ 1.64
CPNE9-204ENST00000491802 SOX4Q06945 474 aaPredicted RBP25.31■■□□□ 1.64
CPNE9-204ENST00000491802 DUSP6Q16828 381 aa25.31■■□□□ 1.64
CPNE9-204ENST00000491802 RBM23Q86U06 439 aaKnown RBP25.31■■□□□ 1.64
CPNE9-204ENST00000491802 HASPINQ8TF76 798 aa25.31■■□□□ 1.64
CPNE9-204ENST00000491802 SCFD1Q8WVM8 642 aa25.31■■□□□ 1.64
CPNE9-204ENST00000491802 AUTS2Q8WXX7 1259 aa25.31■■□□□ 1.64
CPNE9-204ENST00000491802 HERC2P3Q9BVR0 1158 aa25.31■■□□□ 1.64
CPNE9-204ENST00000491802 IGFLR1Q9H665 355 aa25.31■■□□□ 1.64
CPNE9-204ENST00000491802 TLE6Q9H808 572 aa25.31■■□□□ 1.64
CPNE9-204ENST00000491802 ADAM28Q9UKQ2 775 aa25.31■■□□□ 1.64
CPNE9-204ENST00000491802 TTC28Q96AY4 2481 aa25.31■■□□□ 1.64
CPNE9-204ENST00000491802 CUL9Q8IWT3 2517 aa25.31■■□□□ 1.64
CPNE9-204ENST00000491802 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.3■■□□□ 1.64
CPNE9-204ENST00000491802 BMP1P13497 986 aa25.3■■□□□ 1.64
CPNE9-204ENST00000491802 GARTP22102 1010 aa25.3■■□□□ 1.64
CPNE9-204ENST00000491802 HOXD13P35453 343 aa25.3■■□□□ 1.64
CPNE9-204ENST00000491802 SPAG1Q07617 926 aa25.3■■□□□ 1.64
CPNE9-204ENST00000491802 DPYDQ12882 1025 aa25.3■■□□□ 1.64
CPNE9-204ENST00000491802 SNW1Q13573 536 aaKnown RBP25.3■■□□□ 1.64
CPNE9-204ENST00000491802 KCNC3Q14003 757 aa25.3■■□□□ 1.64
CPNE9-204ENST00000491802 PUS10Q3MIT2 529 aaKnown RBP25.3■■□□□ 1.64
CPNE9-204ENST00000491802 ARMCX5Q6P1M9 558 aa25.3■■□□□ 1.64
CPNE9-204ENST00000491802 FUT10Q6P4F1 479 aa25.3■■□□□ 1.64
CPNE9-204ENST00000491802 NELFCDQ8IXH7 590 aa25.3■■□□□ 1.64
CPNE9-204ENST00000491802 TMEM87AQ8NBN3 555 aa25.3■■□□□ 1.64
CPNE9-204ENST00000491802 ENGASEQ8NFI3 743 aa25.3■■□□□ 1.64
CPNE9-204ENST00000491802 ZNF507Q8TCN5 953 aa25.3■■□□□ 1.64
CPNE9-204ENST00000491802 C18orf25Q96B23 403 aaPredicted RBP25.3■■□□□ 1.64
CPNE9-204ENST00000491802 UROC1Q96N76 676 aa25.3■■□□□ 1.64
CPNE9-204ENST00000491802 CBWD1Q9BRT8 395 aa25.3■■□□□ 1.64
CPNE9-204ENST00000491802 CLDND1Q9NY35 253 aa25.3■■□□□ 1.64
CPNE9-204ENST00000491802 C2orf71A6NGG8 1288 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 LACTBL1A8MY62 500 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 PER2O15055 1255 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 GADD45BO75293 160 aaPredicted RBP25.29■■□□□ 1.64
CPNE9-204ENST00000491802 TADA2AO75478 443 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 SOD2P04179 222 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 KCNA5P22460 613 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 CLCNKBP51801 687 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 BMT2Q1RMZ1 405 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 KANK3Q6NY19 840 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 TMEM184AQ6ZMB5 413 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 GPR65Q8IYL9 337 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 KIAA0895Q8NCT3 520 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 CCDC47Q96A33 483 aaKnown RBP25.29■■□□□ 1.64
CPNE9-204ENST00000491802 FAM212AQ96EL1 285 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 SAAL1Q96ER3 474 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 KIF12Q96FN5 646 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 IPO9Q96P70 1041 aaKnown RBP25.29■■□□□ 1.64
CPNE9-204ENST00000491802 TUBGCP4Q9UGJ1 667 aa25.29■■□□□ 1.64
CPNE9-204ENST00000491802 SF3B1O75533 1304 aaKnown RBP eCLIP25.29■■□□□ 1.64
CPNE9-204ENST00000491802 CXCL14O95715 111 aa25.28■■□□□ 1.64
CPNE9-204ENST00000491802 URODP06132 367 aa25.28■■□□□ 1.64
CPNE9-204ENST00000491802 STK4Q13043 487 aa25.28■■□□□ 1.64
CPNE9-204ENST00000491802 PSMD2Q13200 908 aa25.28■■□□□ 1.64
CPNE9-204ENST00000491802 PTPN14Q15678 1187 aa25.28■■□□□ 1.64
CPNE9-204ENST00000491802 EP400NLQ6ZTU2 488 aa25.28■■□□□ 1.64
CPNE9-204ENST00000491802 FAM213AQ9BRX8 229 aa25.28■■□□□ 1.64
CPNE9-204ENST00000491802 GPR62Q9BZJ7 368 aa25.28■■□□□ 1.64
CPNE9-204ENST00000491802 LINC01565O15544 149 aa25.27■■□□□ 1.64
CPNE9-204ENST00000491802 TBX10O75333 385 aa25.27■■□□□ 1.64
CPNE9-204ENST00000491802 UPP1Q16831 310 aa25.27■■□□□ 1.64
CPNE9-204ENST00000491802 CRELD2Q6UXH1 353 aaPredicted RBP25.27■■□□□ 1.64
CPNE9-204ENST00000491802 TAS1R1Q7RTX1 841 aa25.27■■□□□ 1.64
CPNE9-204ENST00000491802 ZSWIM2Q8NEG5 633 aa25.27■■□□□ 1.64
CPNE9-204ENST00000491802 PCIF1Q9H4Z3 704 aa25.27■■□□□ 1.64
CPNE9-204ENST00000491802 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.27■■□□□ 1.64
CPNE9-204ENST00000491802 TCF20Q9UGU0 1960 aaKnown RBP25.27■■□□□ 1.64
CPNE9-204ENST00000491802 TMEM189-UBE2V1I3L0A0 370 aa25.26■■□□□ 1.63
CPNE9-204ENST00000491802 PODXLO00592 558 aa25.26■■□□□ 1.63
CPNE9-204ENST00000491802 LILRB3O75022 631 aa25.26■■□□□ 1.63
CPNE9-204ENST00000491802 B3GAT3O94766 335 aa25.26■■□□□ 1.63
CPNE9-204ENST00000491802 GLP2RO95838 553 aa25.26■■□□□ 1.63
CPNE9-204ENST00000491802 ADRB2P07550 413 aa25.26■■□□□ 1.63
CPNE9-204ENST00000491802 GLUD2P49448 558 aa25.26■■□□□ 1.63
CPNE9-204ENST00000491802 KCNQ1P51787 676 aa25.26■■□□□ 1.63
CPNE9-204ENST00000491802 PNOCQ13519 176 aa25.26■■□□□ 1.63
CPNE9-204ENST00000491802 CD302Q8IX05 232 aa25.26■■□□□ 1.63
CPNE9-204ENST00000491802 C3orf58Q8NDZ4 430 aa25.26■■□□□ 1.63
CPNE9-204ENST00000491802 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.26■■□□□ 1.63
CPNE9-204ENST00000491802 NOC3LQ8WTT2 800 aaKnown RBP25.26■■□□□ 1.63
CPNE9-204ENST00000491802 DDX27Q96GQ7 796 aaKnown RBP25.26■■□□□ 1.63
CPNE9-204ENST00000491802 MSLNLQ96KJ4 702 aa25.26■■□□□ 1.63
CPNE9-204ENST00000491802 MRPL17Q9NRX2 175 aaKnown RBP25.26■■□□□ 1.63
CPNE9-204ENST00000491802 AGPAT3Q9NRZ7 376 aa25.26■■□□□ 1.63
CPNE9-204ENST00000491802 UBQLN1Q9UMX0 589 aaKnown RBP25.26■■□□□ 1.63
CPNE9-204ENST00000491802 SSX2IPQ9Y2D8 614 aa25.26■■□□□ 1.63
CPNE9-204ENST00000491802 GOLGA8IPA6NC78 632 aa25.25■■□□□ 1.63
CPNE9-204ENST00000491802 GOLGA8JA6NMD2 632 aa25.25■■□□□ 1.63
CPNE9-204ENST00000491802 C2CD2LO14523 706 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms