RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 SLC11A1P49279 550 aa18.95■□□□□ 0.62
ERCC3-207ENST00000490062 GRIN2CQ14957 1233 aa18.95■□□□□ 0.62
ERCC3-207ENST00000490062 SURF1Q15526 300 aa18.95■□□□□ 0.62
ERCC3-207ENST00000490062 CT47A1Q5JQC4 288 aaPredicted RBP18.95■□□□□ 0.62
ERCC3-207ENST00000490062 CCDC183Q5T5S1 534 aa18.95■□□□□ 0.62
ERCC3-207ENST00000490062 MLKLQ8NB16 471 aa18.95■□□□□ 0.62
ERCC3-207ENST00000490062 ZSWIM2Q8NEG5 633 aa18.95■□□□□ 0.62
ERCC3-207ENST00000490062 DDX27Q96GQ7 796 aaKnown RBP18.95■□□□□ 0.62
ERCC3-207ENST00000490062 RBAKQ9NYW8 714 aaPredicted RBP18.95■□□□□ 0.62
ERCC3-207ENST00000490062 SPG21Q9NZD8 308 aa18.95■□□□□ 0.62
ERCC3-207ENST00000490062 UBQLN1Q9UMX0 589 aaKnown RBP18.95■□□□□ 0.62
ERCC3-207ENST00000490062 MAPK8IP1Q9UQF2 711 aa18.95■□□□□ 0.62
ERCC3-207ENST00000490062 EPOPA6NHQ4 379 aa18.94■□□□□ 0.62
ERCC3-207ENST00000490062 NRP1O14786 923 aa18.94■□□□□ 0.62
ERCC3-207ENST00000490062 RPL9P32969 192 aaKnown RBP18.94■□□□□ 0.62
ERCC3-207ENST00000490062 SNRNP35Q16560 246 aaKnown RBP18.94■□□□□ 0.62
ERCC3-207ENST00000490062 SPOUT1Q5T280 376 aaKnown RBP18.94■□□□□ 0.62
ERCC3-207ENST00000490062 SPATA1Q5VX52 437 aa18.94■□□□□ 0.62
ERCC3-207ENST00000490062 CBWD2Q8IUF1 395 aa18.94■□□□□ 0.62
ERCC3-207ENST00000490062 RNF168Q8IYW5 571 aaPredicted RBP18.94■□□□□ 0.62
ERCC3-207ENST00000490062 KLHL23Q8NBE8 558 aa18.94■□□□□ 0.62
ERCC3-207ENST00000490062 ARNTL2Q8WYA1 636 aa18.94■□□□□ 0.62
ERCC3-207ENST00000490062 IGSF21Q96ID5 467 aa18.94■□□□□ 0.62
ERCC3-207ENST00000490062 MFSD14AQ96MC6 490 aa18.94■□□□□ 0.62
ERCC3-207ENST00000490062 MKNK1Q9BUB5 465 aa18.94■□□□□ 0.62
ERCC3-207ENST00000490062 MTMR10Q9NXD2 777 aa18.94■□□□□ 0.62
ERCC3-207ENST00000490062 FAN1Q9Y2M0 1017 aa18.94■□□□□ 0.62
ERCC3-207ENST00000490062 SZT2Q5T011 3432 aa18.93■□□□□ 0.62
ERCC3-207ENST00000490062 COL4A4P53420 1690 aaPredicted RBP18.93■□□□□ 0.62
ERCC3-207ENST00000490062 BIN1O00499 593 aa18.93■□□□□ 0.62
ERCC3-207ENST00000490062 EXOC3O60645 756 aa18.93■□□□□ 0.62
ERCC3-207ENST00000490062 FGF18O76093 207 aa18.93■□□□□ 0.62
ERCC3-207ENST00000490062 ITGB1P05556 798 aa18.93■□□□□ 0.62
ERCC3-207ENST00000490062 CYP2J2P51589 502 aa18.93■□□□□ 0.62
ERCC3-207ENST00000490062 CLDN10P78369 228 aa18.93■□□□□ 0.62
ERCC3-207ENST00000490062 SOX4Q06945 474 aaPredicted RBP18.93■□□□□ 0.62
ERCC3-207ENST00000490062 PSMD6Q15008 389 aa18.93■□□□□ 0.62
ERCC3-207ENST00000490062 GLRA4Q5JXX5 417 aa18.93■□□□□ 0.62
ERCC3-207ENST00000490062 DEFB123Q8N688 67 aa18.93■□□□□ 0.62
ERCC3-207ENST00000490062 SPPL3Q8TCT6 385 aa18.93■□□□□ 0.62
ERCC3-207ENST00000490062 COLEC11Q9BWP8 271 aa18.93■□□□□ 0.62
ERCC3-207ENST00000490062 MARCH5Q9NX47 278 aa18.93■□□□□ 0.62
ERCC3-207ENST00000490062 TMEM63CQ9P1W3 806 aa18.93■□□□□ 0.62
ERCC3-207ENST00000490062 GOLGA8IPA6NC78 632 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 GOLGA8JA6NMD2 632 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 PAX3P23760 479 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 NR2F2P24468 414 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 WNT7BP56706 349 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 FKBP3Q00688 224 aaKnown RBP18.92■□□□□ 0.62
ERCC3-207ENST00000490062 CYP24A1Q07973 514 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 GPM6BQ13491 265 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 UPP1Q16831 310 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 ANKRD40Q6AI12 368 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 ISM2Q6H9L7 571 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 JADE1Q6IE81 842 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 TTI2Q6NXR4 508 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 DDX53Q86TM3 631 aaKnown RBP18.92■□□□□ 0.62
ERCC3-207ENST00000490062 EFCAB13Q8IY85 973 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 GPR65Q8IYL9 337 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 SYAP1Q96A49 352 aaPredicted RBP18.92■□□□□ 0.62
ERCC3-207ENST00000490062 KIF12Q96FN5 646 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 TSG101Q99816 390 aa18.92■□□□□ 0.62
ERCC3-207ENST00000490062 TRANK1O15050 2925 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 PLXNA4Q9HCM2 1894 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 BICDL2A1A5D9 508 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 NFICP08651 508 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 OR1G1P47890 313 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 PMS1P54277 932 aaKnown RBP18.91■□□□□ 0.62
ERCC3-207ENST00000490062 NLRP12P59046 1061 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 KRT17Q04695 432 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 ADAM9Q13443 819 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 CAMK1Q14012 370 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 TMEM132DQ14C87 1099 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 SKOR2Q2VWA4 1001 aaPredicted RBP18.91■□□□□ 0.62
ERCC3-207ENST00000490062 PDE12Q6L8Q7 609 aaKnown RBP18.91■□□□□ 0.62
ERCC3-207ENST00000490062 DCLRE1AQ6PJP8 1040 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 TMEM173Q86WV6 379 aaPredicted RBP18.91■□□□□ 0.62
ERCC3-207ENST00000490062 WDR49Q8IV35 697 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 BEST2Q8NFU1 509 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 TMC2Q8TDI7 906 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 BCL7CQ8WUZ0 217 aaPredicted RBP18.91■□□□□ 0.62
ERCC3-207ENST00000490062 TMEM169Q96HH4 297 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 GUCD1Q96NT3 240 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 GZF1Q9H116 711 aaPredicted RBP18.91■□□□□ 0.62
ERCC3-207ENST00000490062 PRDM12Q9H4Q4 367 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 CERS4Q9HA82 394 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 MTUS1Q9ULD2 1270 aa18.91■□□□□ 0.62
ERCC3-207ENST00000490062 CDH23Q9H251 3354 aa18.9■□□□□ 0.62
ERCC3-207ENST00000490062 ANO9A1A5B4 782 aa18.9■□□□□ 0.62
ERCC3-207ENST00000490062 CETN3O15182 167 aa18.9■□□□□ 0.62
ERCC3-207ENST00000490062 GRM6O15303 877 aa18.9■□□□□ 0.62
ERCC3-207ENST00000490062 SLC16A3O15427 465 aaKnown RBP18.9■□□□□ 0.62
ERCC3-207ENST00000490062 PBX3P40426 434 aa18.9■□□□□ 0.62
ERCC3-207ENST00000490062 CASP4P49662 377 aa18.9■□□□□ 0.62
ERCC3-207ENST00000490062 PAK1Q13153 545 aa18.9■□□□□ 0.62
ERCC3-207ENST00000490062 CD300LGQ6UXG3 332 aa18.9■□□□□ 0.62
ERCC3-207ENST00000490062 Q7L0L9 218 aa18.9■□□□□ 0.62
ERCC3-207ENST00000490062 PARD3BQ8TEW8 1205 aa18.9■□□□□ 0.62
ERCC3-207ENST00000490062 C18orf25Q96B23 403 aaPredicted RBP18.9■□□□□ 0.62
ERCC3-207ENST00000490062 MRPL38Q96DV4 380 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms