RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 NCKAP1LP55160 1127 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 RTP1P59025 263 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 ARHGAP1Q07960 439 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 CBX3Q13185 183 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 RIPK1Q13546 671 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 OLFML2BQ68BL8 750 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 ANKRD40Q6AI12 368 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 METTL7BQ6UX53 244 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 ARMCX2Q7L311 632 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 NAA15Q9BXJ9 866 aaKnown RBP10.5□□□□□ -0.73
NOD1-208ENST00000489614 EXOC1Q9NV70 894 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 STIM2Q9P246 746 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 ATXN10Q9UBB4 475 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 SEL1LQ9UBV2 794 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 CHMP2BQ9UQN3 213 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 TRAF3IP3Q9Y228 551 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 PPME1Q9Y570 386 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 EVPLQ92817 2033 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 GAP43P17677 238 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 SP100P23497 879 aaPredicted RBP10.5□□□□□ -0.73
NOD1-208ENST00000489614 YWHABP31946 246 aaKnown RBP10.5□□□□□ -0.73
NOD1-208ENST00000489614 CARSP49589 748 aaKnown RBP10.5□□□□□ -0.73
NOD1-208ENST00000489614 PAK2Q13177 524 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 KCTD2Q14681 263 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 C16orf87Q6PH81 154 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 IQCKQ8N0W5 287 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 TEX9Q8N6V9 391 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 TRIM49BA6NDI0 452 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 CHMP2AO43633 222 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 E2F6O75461 281 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 HNRNPCP07910 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
NOD1-208ENST00000489614 RPL13P26373 211 aaKnown RBP10.49□□□□□ -0.73
NOD1-208ENST00000489614 MRPS35P82673 323 aaKnown RBP10.49□□□□□ -0.73
NOD1-208ENST00000489614 CAP1Q01518 475 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 GUCY2DQ02846 1103 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 MKRN3Q13064 507 aaKnown RBP10.49□□□□□ -0.73
NOD1-208ENST00000489614 ZNF268Q14587 947 aaPredicted RBP10.49□□□□□ -0.73
NOD1-208ENST00000489614 PABPC1LQ4VXU2 614 aaKnown RBP10.49□□□□□ -0.73
NOD1-208ENST00000489614 TMEM63BQ5T3F8 832 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 FAM47EQ6ZV65 393 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 DYMQ7RTS9 669 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 PLEKHH3Q7Z736 793 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 TPH2Q8IWU9 490 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 PIGOQ8TEQ8 1089 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 BRD8Q9H0E9 1235 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 DUSP10Q9Y6W6 482 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 ADCY6O43306 1168 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 GYPCP04921 128 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 PSAPP07602 524 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 ALOX15P16050 662 aaPredicted RBP10.49□□□□□ -0.73
NOD1-208ENST00000489614 GSTT1P30711 240 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 VAV2P52735 878 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 LRRC63Q05C16 580 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 GLE1Q53GS7 698 aaKnown RBP10.49□□□□□ -0.73
NOD1-208ENST00000489614 MIIPQ5JXC2 388 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 RASIP1Q5U651 963 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 EMBQ6PCB8 327 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 CCDC65Q8IXS2 484 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 LINC01465Q8N7H1 131 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 MDM1Q8TC05 714 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 DDX27Q96GQ7 796 aaKnown RBP10.49□□□□□ -0.73
NOD1-208ENST00000489614 CORO1BQ9BR76 489 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 NTPCRQ9BSD7 190 aaKnown RBP10.49□□□□□ -0.73
NOD1-208ENST00000489614 GPBP1L1Q9HC44 474 aaPredicted RBP10.49□□□□□ -0.73
NOD1-208ENST00000489614 FLRT1Q9NZU1 646 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 IGKV6-21A0A0C4DH24 114 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 NKRFO15226 690 aaKnown RBP eCLIP10.49□□□□□ -0.73
NOD1-208ENST00000489614 MARCH6O60337 910 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 NQO1P15559 274 aaKnown RBP10.49□□□□□ -0.73
NOD1-208ENST00000489614 FECHP22830 423 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 SREBF2Q12772 1141 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 FAM26FQ5R3K3 315 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 PLPPR4Q7Z2D5 763 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 LCA5Q86VQ0 697 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 CCNJLQ8IV13 435 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 REM2Q8IYK8 340 aaPredicted RBP10.49□□□□□ -0.73
NOD1-208ENST00000489614 CCDC197Q8NCU1 140 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 UCMAQ8WVF2 138 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 CTNNBL1Q8WYA6 563 aaPredicted RBP10.49□□□□□ -0.73
NOD1-208ENST00000489614 RPGRIP1Q96KN7 1286 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 XPNPEP1Q9NQW7 623 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 ITIH6Q6UXX5 1313 aa10.49□□□□□ -0.73
NOD1-208ENST00000489614 DDX39AO00148 427 aaKnown RBP10.48□□□□□ -0.73
NOD1-208ENST00000489614 KRT16P08779 473 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 DNA2P51530 1060 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 KLC1Q07866 573 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 EDRF1Q3B7T1 1238 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 TCP11X2Q5H9J9 407 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 FOXB2Q5VYV0 432 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 DPY19L2P1Q6NXN4 242 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 C14orf80Q86SX3 495 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 SFR1Q86XK3 245 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 TMTC1Q8IUR5 882 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 SLC35B4Q969S0 331 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 DHX33Q9H6R0 707 aaKnown RBP10.48□□□□□ -0.73
NOD1-208ENST00000489614 CREBZFQ9NS37 354 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 ZNHIT6Q9NWK9 470 aaKnown RBP10.48□□□□□ -0.73
NOD1-208ENST00000489614 PLAAQ9Y263 795 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 EPN1Q9Y6I3 576 aaPredicted RBP10.48□□□□□ -0.73
NOD1-208ENST00000489614 LSM1O15116 133 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms