RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 CES5AQ6NT32 575 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 PDXDC1Q6P996 788 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 TAS1R1Q7RTX1 841 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 CEP57Q86XR8 500 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 GPR65Q8IYL9 337 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 HASPINQ8TF76 798 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 POP1Q99575 1024 aaKnown RBP15.57■□□□□ 0.08
BRCA1-218ENST00000489037 PAAF1Q9BRP4 392 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 GPR62Q9BZJ7 368 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 CXCL16Q9H2A7 254 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 TMEM206Q9H813 350 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 CACNG4Q9UBN1 327 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 PRKAG3Q9UGI9 489 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 A0A0B4J269 797 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 FRMD3A2A2Y4 597 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 F8W810 466 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 TMEM189-UBE2V1I3L0A0 370 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 KIF4AO95239 1232 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 CNPP09543 421 aaKnown RBP15.56■□□□□ 0.08
BRCA1-218ENST00000489037 CXCL8P10145 99 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 CMA1P23946 247 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 SSTR3P32745 418 aaPredicted RBP15.56■□□□□ 0.08
BRCA1-218ENST00000489037 RPL9P32969 192 aaKnown RBP15.56■□□□□ 0.08
BRCA1-218ENST00000489037 CLCNKBP51801 687 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 RBM10P98175 930 aaKnown RBP15.56■□□□□ 0.08
BRCA1-218ENST00000489037 KCNC3Q14003 757 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 SMAD2Q15796 467 aaKnown RBP15.56■□□□□ 0.08
BRCA1-218ENST00000489037 SLC10A6Q3KNW5 377 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 FAM171A1Q5VUB5 890 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 KIAA0319Q5VV43 1072 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 CD302Q8IX05 232 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 RNF168Q8IYW5 571 aaPredicted RBP15.56■□□□□ 0.08
BRCA1-218ENST00000489037 SMRP1Q8NCR6 262 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 VN1R2Q8NFZ6 395 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 RIN2Q8WYP3 895 aaPredicted RBP15.56■□□□□ 0.08
BRCA1-218ENST00000489037 POMGNT1Q8WZA1 660 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 FAM212AQ96EL1 285 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 NECAB3Q96P71 396 aaPredicted RBP15.56■□□□□ 0.08
BRCA1-218ENST00000489037 TSPAN18Q96SJ8 248 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 C7orf25Q9BPX7 421 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 TTPALQ9BTX7 342 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 TRIM9Q9C026 710 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 CHST7Q9NS84 486 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 USP25Q9UHP3 1055 aa15.56■□□□□ 0.08
BRCA1-218ENST00000489037 AGO2Q9UKV8 859 aaKnown RBP15.56■□□□□ 0.08
BRCA1-218ENST00000489037 SPTBN5Q9NRC6 3674 aaKnown RBP15.55■□□□□ 0.08
BRCA1-218ENST00000489037 ANKRD63C9JTQ0 380 aa15.55■□□□□ 0.08
BRCA1-218ENST00000489037 LILRB3O75022 631 aa15.55■□□□□ 0.08
BRCA1-218ENST00000489037 EFEMP2O95967 443 aa15.55■□□□□ 0.08
BRCA1-218ENST00000489037 UPP1Q16831 310 aa15.55■□□□□ 0.08
BRCA1-218ENST00000489037 SLC22A17Q8WUG5 538 aa15.55■□□□□ 0.08
BRCA1-218ENST00000489037 KIF12Q96FN5 646 aa15.55■□□□□ 0.08
BRCA1-218ENST00000489037 ZMAT2Q96NC0 199 aaKnown RBP15.55■□□□□ 0.08
BRCA1-218ENST00000489037 HAPLN2Q9GZV7 340 aa15.55■□□□□ 0.08
BRCA1-218ENST00000489037 GOLGA2P5Q9HBQ8 144 aa15.55■□□□□ 0.08
BRCA1-218ENST00000489037 RXFP1Q9HBX9 757 aa15.55■□□□□ 0.08
BRCA1-218ENST00000489037 FNIP2Q9P278 1114 aa15.55■□□□□ 0.08
BRCA1-218ENST00000489037 UBQLN1Q9UMX0 589 aaKnown RBP15.55■□□□□ 0.08
BRCA1-218ENST00000489037 NUB1Q9Y5A7 615 aa15.55■□□□□ 0.08
BRCA1-218ENST00000489037 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.54■□□□□ 0.08
BRCA1-218ENST00000489037 A0A1B0GVL5 298 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 PODXLO00592 558 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 PPP1R37O75864 691 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 LDHAP00338 332 aaKnown RBP15.54■□□□□ 0.08
BRCA1-218ENST00000489037 SLFN14P0C7P3 912 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 MYBP10242 640 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 EPCAMP16422 314 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 TNFSF9P41273 254 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 AFMP43652 599 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 ITIH3Q06033 890 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 CNNM4Q6P4Q7 775 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 SLC39A4Q6P5W5 647 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.54■□□□□ 0.08
BRCA1-218ENST00000489037 UNC13DQ70J99 1090 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 ADHFE1Q8IWW8 467 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 GJD3Q8N144 294 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 FBXL18Q96ME1 805 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 APOL5Q9BWW9 433 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 STRA6Q9BX79 667 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 SERTAD1Q9UHV2 236 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 USP15Q9Y4E8 981 aaPredicted RBP15.54■□□□□ 0.08
BRCA1-218ENST00000489037 STYXL1Q9Y6J8 313 aa15.54■□□□□ 0.08
BRCA1-218ENST00000489037 VWA8A3KMH1 1905 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 TTC26A0AVF1 554 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 GOLGA6L4A6NEF3 574 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 LACTBL1A8MY62 500 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 TULP1O00294 542 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-218ENST00000489037 TEX28O15482 410 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 GLUD1P00367 558 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 PFKFB1P16118 471 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 CYP3A5P20815 502 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 SYKP43405 635 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 ACOT2P49753 483 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 CLCN4P51793 760 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 POU5F1Q01860 360 aaKnown RBP15.53■□□□□ 0.08
BRCA1-218ENST00000489037 SOX4Q06945 474 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-218ENST00000489037 ENOX2Q16206 610 aaKnown RBP15.53■□□□□ 0.08
BRCA1-218ENST00000489037 PSMD5Q16401 504 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 FAM26FQ5R3K3 315 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 SYCE2Q6PIF2 218 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms