RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, human

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD46-215	ENST00000488596	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.26	□□□□□ -1.73
CD46-215	ENST00000488596	OR5M3	Q8NGP4	307 aa		4.26	□□□□□ -1.73
CD46-215	ENST00000488596	RIN2	Q8WYP3	895 aa	Predicted RBP	4.26	□□□□□ -1.73
CD46-215	ENST00000488596	COA7	Q96BR5	231 aa		4.26	□□□□□ -1.73
CD46-215	ENST00000488596	LRGUK	Q96M69	825 aa		4.26	□□□□□ -1.73
CD46-215	ENST00000488596	PDCD2L	Q9BRP1	358 aa		4.26	□□□□□ -1.73
CD46-215	ENST00000488596	NDC1	Q9BTX1	674 aa		4.26	□□□□□ -1.73
CD46-215	ENST00000488596	SLC46A2	Q9BY10	475 aa		4.26	□□□□□ -1.73
CD46-215	ENST00000488596	WDR11	Q9BZH6	1224 aa		4.26	□□□□□ -1.73
CD46-215	ENST00000488596	SERHL2	Q9H4I8	314 aa		4.26	□□□□□ -1.73
CD46-215	ENST00000488596	PRDM13	Q9H4Q3	707 aa		4.26	□□□□□ -1.73
CD46-215	ENST00000488596	CYP4F11	Q9HBI6	524 aa		4.26	□□□□□ -1.73
CD46-215	ENST00000488596	TCF7L1	Q9HCS4	588 aa		4.26	□□□□□ -1.73
CD46-215	ENST00000488596	INTU	Q9ULD6	942 aa		4.26	□□□□□ -1.73
CD46-215	ENST00000488596	ZBTB21	Q9ULJ3	1066 aa		4.26	□□□□□ -1.73
CD46-215	ENST00000488596		A0A1W2PR48	441 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	TMEM200C	A6NKL6	621 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	LEFTY2	O00292	366 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	AKR1B10	O60218	316 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	PRAMEF4	O60810	478 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	TMEM127	O75204	238 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	RFPL1	O75677	317 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	ZNF37A	P17032	561 aa	Predicted RBP	4.25	□□□□□ -1.73
CD46-215	ENST00000488596	CTSS	P25774	331 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	FXR1	P51114	621 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
CD46-215	ENST00000488596	TAP1	Q03518	808 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	PPP3CA	Q08209	521 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	MALL	Q13021	153 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	MRPL49	Q13405	166 aa	Known RBP	4.25	□□□□□ -1.73
CD46-215	ENST00000488596	ANO4	Q32M45	955 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	UAP1L1	Q3KQV9	507 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	MUM1L1	Q5H9M0	696 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	STRIP1	Q5VSL9	837 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.25	□□□□□ -1.73
CD46-215	ENST00000488596	SYCE2	Q6PIF2	218 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	CATIP	Q7Z7H3	387 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	XYLT1	Q86Y38	959 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	GLB1L2	Q8IW92	636 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	UNC5B	Q8IZJ1	945 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	MYO1H	Q8N1T3	1032 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	MIER2	Q8N344	545 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	MSL3	Q8N5Y2	521 aa	Known RBP	4.25	□□□□□ -1.73
CD46-215	ENST00000488596	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
CD46-215	ENST00000488596	OR2I1P	Q8NGU4	316 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	ADI1	Q9BV57	179 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	GREM2	Q9H772	168 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	TRPM5	Q9NZQ8	1165 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	DKK2	Q9UBU2	259 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	SCOC	Q9UIL1	159 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	LIMCH1	Q9UPQ0	1083 aa		4.25	□□□□□ -1.73
CD46-215	ENST00000488596	CCDC154	A6NI56	674 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	NRP1	O14786	923 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	NCR1	O76036	304 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	EDNRB	P24530	442 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	MCAM	P43121	646 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	ADK	P55263	362 aa	Known RBP	4.24	□□□□□ -1.73
CD46-215	ENST00000488596	MLC1	Q15049	377 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	FAM102B	Q5T8I3	360 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	ZKSCAN2	Q63HK3	967 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	TAS1R1	Q7RTX1	841 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	GDF7	Q7Z4P5	450 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	GPR156	Q8NFN8	814 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	SSH1	Q8WYL5	1049 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	IL17RA	Q96F46	866 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	CAMKK2	Q96RR4	588 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	TEX101	Q9BY14	249 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	AKIP1	Q9NQ31	210 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	ANLN	Q9NQW6	1124 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	ADARB2	Q9NS39	739 aa	Known RBP	4.24	□□□□□ -1.73
CD46-215	ENST00000488596	SYBU	Q9NX95	663 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	CHST2	Q9Y4C5	530 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	PCDHA13	Q9Y5I0	950 aa		4.24	□□□□□ -1.73
CD46-215	ENST00000488596	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.24	□□□□□ -1.73
CD46-215	ENST00000488596	RPTOR	Q8N122	1335 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	HTRA2	O43464	458 aa	Predicted RBP	4.23	□□□□□ -1.73
CD46-215	ENST00000488596	AP1G1	O43747	822 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	POU2F2	P09086	479 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	LTA4H	P09960	611 aa	Known RBP	4.23	□□□□□ -1.73
CD46-215	ENST00000488596	PDC	P20941	246 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	CYP2C19	P33261	490 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	USP14	P54578	494 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	IL10RA	Q13651	578 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	ZNF267	Q14586	743 aa	Predicted RBP	4.23	□□□□□ -1.73
CD46-215	ENST00000488596	SEPT2	Q15019	361 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	C3orf36	Q3SXR2	165 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	RRP12	Q5JTH9	1297 aa	Known RBP	4.23	□□□□□ -1.73
CD46-215	ENST00000488596		Q6ZVL8	140 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	DOK3	Q7L591	496 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	GPRIN1	Q7Z2K8	1008 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	ARHGEF19	Q8IW93	802 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	TCEAL8	Q8IYN2	117 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	TTC8	Q8TAM2	541 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	SNX33	Q8WV41	574 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	DCLRE1C	Q96SD1	692 aa	Known RBP	4.23	□□□□□ -1.73
CD46-215	ENST00000488596	GTPBP4	Q9BZE4	634 aa	Known RBP	4.23	□□□□□ -1.73
CD46-215	ENST00000488596	R3HDML	Q9H3Y0	253 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	RBM12	Q9NTZ6	932 aa	Known RBP	4.23	□□□□□ -1.73
CD46-215	ENST00000488596	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.23	□□□□□ -1.73
CD46-215	ENST00000488596	HDAC5	Q9UQL6	1122 aa		4.23	□□□□□ -1.73
CD46-215	ENST00000488596	IPP	Q9Y573	584 aa		4.23	□□□□□ -1.73

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