RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 SF3B1O75533 1304 aaKnown RBP eCLIP16.39■□□□□ 0.21
CXCL12-207ENST00000488591 ATG2AQ2TAZ0 1938 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 MYO7AQ13402 2215 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.38■□□□□ 0.21
CXCL12-207ENST00000488591 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.38■□□□□ 0.21
CXCL12-207ENST00000488591 TTC26A0AVF1 554 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 C2orf71A6NGG8 1288 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 HIDE1A8MVS5 230 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 LACTBL1A8MY62 500 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 PER2O15055 1255 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 KLRC4O43908 158 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 FAM189A1O60320 539 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 RPN1P04843 607 aaKnown RBP16.38■□□□□ 0.21
CXCL12-207ENST00000488591 URODP06132 367 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 ADSSP30520 456 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 RPL9P32969 192 aaKnown RBP16.38■□□□□ 0.21
CXCL12-207ENST00000488591 CLCNKBP51801 687 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 SNRPFP62306 86 aaKnown RBP16.38■□□□□ 0.21
CXCL12-207ENST00000488591 ENOX2Q16206 610 aaKnown RBP16.38■□□□□ 0.21
CXCL12-207ENST00000488591 ZBTB41Q5SVQ8 909 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 ARMCX5Q6P1M9 558 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 FUT10Q6P4F1 479 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 FMR1NBQ8N0W7 255 aaPredicted RBP16.38■□□□□ 0.21
CXCL12-207ENST00000488591 EFHBQ8N7U6 833 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 GLIS3Q8NEA6 775 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 KIF12Q96FN5 646 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 ZMAT2Q96NC0 199 aaKnown RBP16.38■□□□□ 0.21
CXCL12-207ENST00000488591 PAAF1Q9BRP4 392 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 IKZF4Q9H2S9 585 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 IRAK3Q9Y616 596 aa16.38■□□□□ 0.21
CXCL12-207ENST00000488591 TRAPPC3O43617 180 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 B3GAT3O94766 335 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 KIF20AO95235 890 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 ADRB2P07550 413 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 KCNA5P22460 613 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 GTF2F1P35269 517 aaKnown RBP eCLIP16.37■□□□□ 0.21
CXCL12-207ENST00000488591 GLUD2P49448 558 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 DPYDQ12882 1025 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 ADAM15Q13444 863 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 COL19A1Q14993 1142 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 DUSP6Q16828 381 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 UPP1Q16831 310 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 USP41Q3LFD5 358 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 HS2ST1Q7LGA3 356 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 NELFCDQ8IXH7 590 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 HASPINQ8TF76 798 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 SCFD1Q8WVM8 642 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 AUTS2Q8WXX7 1259 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 IPO9Q96P70 1041 aaKnown RBP16.37■□□□□ 0.21
CXCL12-207ENST00000488591 FAM213AQ9BRX8 229 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 VN1R3Q9BXE9 311 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 EMILIN2Q9BXX0 1053 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 ASB7Q9H672 318 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 CACNG4Q9UBN1 327 aa16.37■□□□□ 0.21
CXCL12-207ENST00000488591 UBQLN1Q9UMX0 589 aaKnown RBP16.37■□□□□ 0.21
CXCL12-207ENST00000488591 F8W810 466 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 TMEM189-UBE2V1I3L0A0 370 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 TULP1O00294 542 aaPredicted RBP16.36■□□□□ 0.21
CXCL12-207ENST00000488591 PODXLO00592 558 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 MEFVO15553 781 aaPredicted RBP16.36■□□□□ 0.21
CXCL12-207ENST00000488591 EXTL3O43909 919 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 KIF4AO95239 1232 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 IL18RAPO95256 599 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 EFEMP2O95967 443 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 NDUFV1P49821 464 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 SOX4Q06945 474 aaPredicted RBP16.36■□□□□ 0.21
CXCL12-207ENST00000488591 SPAG1Q07617 926 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 PTPN14Q15678 1187 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 CTC1Q2NKJ3 1217 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 TAS1R1Q7RTX1 841 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 RNF168Q8IYW5 571 aaPredicted RBP16.36■□□□□ 0.21
CXCL12-207ENST00000488591 ENGASEQ8NFI3 743 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 NOC3LQ8WTT2 800 aaKnown RBP16.36■□□□□ 0.21
CXCL12-207ENST00000488591 C18orf25Q96B23 403 aaPredicted RBP16.36■□□□□ 0.21
CXCL12-207ENST00000488591 TIGD1Q96MW7 591 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 ASB2Q96Q27 587 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 CBWD1Q9BRT8 395 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 GPR62Q9BZJ7 368 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 PCIF1Q9H4Z3 704 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 GOLGA2P5Q9HBQ8 144 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 KIAA1586Q9HCI6 787 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 CGNQ9P2M7 1197 aaKnown RBP16.36■□□□□ 0.21
CXCL12-207ENST00000488591 DERAQ9Y315 318 aa16.36■□□□□ 0.21
CXCL12-207ENST00000488591 C2CD2LO14523 706 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 KINO60870 393 aaKnown RBP16.35■□□□□ 0.21
CXCL12-207ENST00000488591 SMC2O95347 1197 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 PRR29P0C7W0 189 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 CYP3A5P20815 502 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 HOXD13P35453 343 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 DSG1Q02413 1049 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 CREMQ03060 361 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 TFF2Q03403 129 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 STK4Q13043 487 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 SNW1Q13573 536 aaKnown RBP16.35■□□□□ 0.21
CXCL12-207ENST00000488591 KCNB1Q14721 858 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 TMEM132DQ14C87 1099 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 KNOP1Q1ED39 458 aaKnown RBP16.35■□□□□ 0.21
CXCL12-207ENST00000488591 BMT2Q1RMZ1 405 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 PUS10Q3MIT2 529 aaKnown RBP16.35■□□□□ 0.21
CXCL12-207ENST00000488591 FAM171A1Q5VUB5 890 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms