RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 SPIRE1Q08AE8 756 aa10.28□□□□□ -0.76
COL17A1-207ENST00000488320 ZNF252P-AS1Q0IIN9 211 aa10.28□□□□□ -0.76
COL17A1-207ENST00000488320 MXD4Q14582 209 aaPredicted RBP10.28□□□□□ -0.76
COL17A1-207ENST00000488320 EMC2Q15006 297 aa10.28□□□□□ -0.76
COL17A1-207ENST00000488320 XKR9Q5GH70 373 aa10.28□□□□□ -0.76
COL17A1-207ENST00000488320 DGKKQ5KSL6 1271 aa10.28□□□□□ -0.76
COL17A1-207ENST00000488320 SLC27A1Q6PCB7 646 aa10.28□□□□□ -0.76
COL17A1-207ENST00000488320 C1orf228Q6PIY5 440 aa10.28□□□□□ -0.76
COL17A1-207ENST00000488320 VITQ6UXI7 678 aa10.28□□□□□ -0.76
COL17A1-207ENST00000488320 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.28□□□□□ -0.76
COL17A1-207ENST00000488320 MAP4K3Q8IVH8 894 aa10.28□□□□□ -0.76
COL17A1-207ENST00000488320 ELMOD1Q8N336 334 aa10.28□□□□□ -0.76
COL17A1-207ENST00000488320 CCDC148Q8NFR7 591 aa10.28□□□□□ -0.76
COL17A1-207ENST00000488320 DEPDC1BQ8WUY9 529 aa10.28□□□□□ -0.76
COL17A1-207ENST00000488320 SMARCD2Q92925 531 aa10.28□□□□□ -0.76
COL17A1-207ENST00000488320 ASB16Q96NS5 453 aa10.28□□□□□ -0.76
COL17A1-207ENST00000488320 ADAM33Q9BZ11 813 aa10.28□□□□□ -0.76
COL17A1-207ENST00000488320 C8orf33Q9H7E9 229 aaPredicted RBP10.28□□□□□ -0.76
COL17A1-207ENST00000488320 AVENQ9NQS1 362 aaPredicted RBP10.28□□□□□ -0.76
COL17A1-207ENST00000488320 FASNP49327 2511 aaKnown RBP10.27□□□□□ -0.77
COL17A1-207ENST00000488320 WDR27A2RRH5 827 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 EML1O00423 815 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 GIPC1O14908 333 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 PRPF3O43395 683 aaKnown RBP10.27□□□□□ -0.77
COL17A1-207ENST00000488320 MARCH6O60337 910 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 PAPSS2O95340 614 aaPredicted RBP10.27□□□□□ -0.77
COL17A1-207ENST00000488320 TDP2O95551 362 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 P4HBP07237 508 aaKnown RBP10.27□□□□□ -0.77
COL17A1-207ENST00000488320 VIPR2P41587 438 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 ARPP19P56211 112 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 TMEM132AQ24JP5 1023 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 DAB2IPQ5VWQ8 1189 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 IQCEQ6IPM2 695 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 B3GNT9Q6UX72 402 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 Q6ZS52 159 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 DHX32Q7L7V1 743 aaKnown RBP10.27□□□□□ -0.77
COL17A1-207ENST00000488320 KBTBD6Q86V97 674 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 MFSD6LQ8IWD5 586 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 TTC8Q8TAM2 541 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 GAB3Q8WWW8 586 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 KIF12Q96FN5 646 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 ZNF512Q96ME7 567 aaPredicted RBP10.27□□□□□ -0.77
COL17A1-207ENST00000488320 C22orf23Q9BZE7 217 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 LSG1Q9H089 658 aaKnown RBP10.27□□□□□ -0.77
COL17A1-207ENST00000488320 CYP4F11Q9HBI6 524 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 VPS45Q9NRW7 570 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 MTRRQ9UBK8 725 aa10.27□□□□□ -0.77
COL17A1-207ENST00000488320 SPAG17Q6Q759 2223 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 SLC38A8A6NNN8 435 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 C4orf47A7E2U8 309 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 HEPACAM2A8MVW5 462 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 NRG2O14511 850 aaPredicted RBP10.26□□□□□ -0.77
COL17A1-207ENST00000488320 MICAL2O94851 1124 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 MYL4P12829 197 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 YWHABP31946 246 aaKnown RBP10.26□□□□□ -0.77
COL17A1-207ENST00000488320 MPLP40238 635 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 SOX9P48436 509 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 PXNP49023 591 aaPredicted RBP10.26□□□□□ -0.77
COL17A1-207ENST00000488320 MLLT6P55198 1093 aaPredicted RBP10.26□□□□□ -0.77
COL17A1-207ENST00000488320 EXOSC10Q01780 885 aaKnown RBP10.26□□□□□ -0.77
COL17A1-207ENST00000488320 MBTD1Q05BQ5 628 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 NECTIN1Q15223 517 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 PRSS36Q5K4E3 855 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 SH3PXD2AQ5TCZ1 1133 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 RNF20Q5VTR2 975 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 ANKS3Q6ZW76 656 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 ZCCHC14Q8WYQ9 949 aaKnown RBP10.26□□□□□ -0.77
COL17A1-207ENST00000488320 MSANTD3Q96H12 275 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 ZSWIM3Q96MP5 696 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 EDEM2Q9BV94 578 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 SLITRK6Q9H5Y7 841 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 C2orf42Q9NWW7 574 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 SNTG2Q9NY99 539 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 VPS54Q9P1Q0 977 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 DDX25Q9UHL0 483 aaKnown RBP10.26□□□□□ -0.77
COL17A1-207ENST00000488320 PCDHGA5Q9Y5G8 931 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 BACE2Q9Y5Z0 518 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 VWA8A3KMH1 1905 aa10.26□□□□□ -0.77
COL17A1-207ENST00000488320 PKD1L2Q7Z442 2459 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 CYP3A7-CYP3A51PA0A087WV96 503 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 A0A1B0GUA9 196 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 ARHGEF37A1IGU5 675 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 B4GALT5O43286 388 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 TRAPPC3O43617 180 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 B3GAT3O94766 335 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 TOP3BO95985 862 aaKnown RBP10.25□□□□□ -0.77
COL17A1-207ENST00000488320 GJA1P17302 382 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 FGFR3P22607 806 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 CYP3A7P24462 503 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 TKTP29401 623 aaKnown RBP10.25□□□□□ -0.77
COL17A1-207ENST00000488320 HOXA6P31267 233 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 HOXC13P31276 330 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 RAP1GAPP47736 663 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 POU5F1BQ06416 359 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 PON2Q15165 354 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 AMHR2Q16671 573 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 PLA2G2CQ5R387 149 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 C4orf19Q8IY42 314 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 HS6ST3Q8IZP7 471 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 ZNF461Q8TAF7 563 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms