RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 RPF1Q9H9Y2 349 aaKnown RBP11.14□□□□□ -0.63
NEK4-204ENST00000487068 GOLGA2P5Q9HBQ8 144 aa11.14□□□□□ -0.63
NEK4-204ENST00000487068 PTPRHQ9HD43 1115 aa11.14□□□□□ -0.63
NEK4-204ENST00000487068 CD320Q9NPF0 282 aa11.14□□□□□ -0.63
NEK4-204ENST00000487068 MRPL17Q9NRX2 175 aaKnown RBP11.14□□□□□ -0.63
NEK4-204ENST00000487068 EXOC1Q9NV70 894 aa11.14□□□□□ -0.63
NEK4-204ENST00000487068 SLC38A7Q9NVC3 462 aa11.14□□□□□ -0.63
NEK4-204ENST00000487068 ADAM28Q9UKQ2 775 aa11.14□□□□□ -0.63
NEK4-204ENST00000487068 PCDHB13Q9Y5F0 798 aa11.14□□□□□ -0.63
NEK4-204ENST00000487068 DENND4AQ7Z401 1863 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 TISP43B9A030 160 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 ABLIM1O14639 778 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 FSCN2O14926 492 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 PRPF6O94906 941 aaKnown RBP11.13□□□□□ -0.63
NEK4-204ENST00000487068 KIF4AO95239 1232 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 CXCL14O95715 111 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 PIGRP01833 764 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 SOD2P04179 222 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 CLTAP09496 248 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 SLFN14P0C7P3 912 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 CTSAP10619 480 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 SSTR3P32745 418 aaPredicted RBP11.13□□□□□ -0.63
NEK4-204ENST00000487068 TNFSF9P41273 254 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 CASP5P51878 434 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 NDUFA8P51970 172 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 SPAG1Q07617 926 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 FAM26FQ5R3K3 315 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 SLFN12LQ6IEE8 588 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 ARMCX5Q6P1M9 558 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 FUT10Q6P4F1 479 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 ZNF720Q7Z2F6 126 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 CEP57Q86XR8 500 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 HPS3Q969F9 1004 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 CCDC47Q96A33 483 aaKnown RBP11.13□□□□□ -0.63
NEK4-204ENST00000487068 KIF12Q96FN5 646 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 CDCA3Q99618 268 aaPredicted RBP11.13□□□□□ -0.63
NEK4-204ENST00000487068 PAAF1Q9BRP4 392 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 HERC2P3Q9BVR0 1158 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 EMILIN2Q9BXX0 1053 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 ST6GALNAC4Q9H4F1 302 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 TMEM206Q9H813 350 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 MARCH5Q9NX47 278 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 USP25Q9UHP3 1055 aa11.13□□□□□ -0.63
NEK4-204ENST00000487068 AGO2Q9UKV8 859 aaKnown RBP11.13□□□□□ -0.63
NEK4-204ENST00000487068 BARX2Q9UMQ3 279 aaPredicted RBP11.13□□□□□ -0.63
NEK4-204ENST00000487068 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.12□□□□□ -0.63
NEK4-204ENST00000487068 SMIM28A0A1B0GU29 152 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 FRMD3A2A2Y4 597 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 C2orf71A6NGG8 1288 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 ANKRD63C9JTQ0 380 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 XPOTO43592 962 aaKnown RBP11.12□□□□□ -0.63
NEK4-204ENST00000487068 ACTN4O43707 911 aaKnown RBP11.12□□□□□ -0.63
NEK4-204ENST00000487068 TBX10O75333 385 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 B3GAT3O94766 335 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 ALADP13716 330 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 ACOT2P49753 483 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 CLCNKBP51801 687 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 CUL4BQ13620 913 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 DUSP6Q16828 381 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 LEXMQ3ZCV2 418 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 ZBTB41Q5SVQ8 909 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 SLC39A4Q6P5W5 647 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 UNC13DQ70J99 1090 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 GLYCTKQ8IVS8 523 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 EFHBQ8N7U6 833 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 SAAL1Q96ER3 474 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 B3GALT6Q96L58 329 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 UROC1Q96N76 676 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 PPP1R10Q96QC0 940 aaKnown RBP11.12□□□□□ -0.63
NEK4-204ENST00000487068 C7orf25Q9BPX7 421 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 FGFBP2Q9BYJ0 223 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 HAPLN2Q9GZV7 340 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 IKZF4Q9H2S9 585 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 CNTN3Q9P232 1028 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 FAM50BQ9Y247 325 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 SSX2IPQ9Y2D8 614 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 NUB1Q9Y5A7 615 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 MYH10P35580 1976 aa11.12□□□□□ -0.63
NEK4-204ENST00000487068 A0A0B4J269 797 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 A0A1W2PQ27 194 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 A0A1W2PQ64 194 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 A0A1W2PQD8 194 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 PODXLO00592 558 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 PPP1R37O75864 691 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 IL9P15248 144 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 KLRC2P26717 231 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 MCM4P33991 863 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 RBM10P98175 930 aaKnown RBP11.11□□□□□ -0.63
NEK4-204ENST00000487068 KCNA1Q09470 495 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 ELAVL2Q12926 359 aaKnown RBP11.11□□□□□ -0.63
NEK4-204ENST00000487068 POSTNQ15063 836 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 PTPN14Q15678 1187 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 USP41Q3LFD5 358 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 FAM171A1Q5VUB5 890 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 PTCRAQ6ISU1 281 aaPredicted RBP11.11□□□□□ -0.63
NEK4-204ENST00000487068 NELFCDQ8IXH7 590 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 MRPL43Q8N983 215 aaKnown RBP11.11□□□□□ -0.63
NEK4-204ENST00000487068 GLIS3Q8NEA6 775 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.11□□□□□ -0.63
NEK4-204ENST00000487068 RIN2Q8WYP3 895 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms