RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 MLST8Q9BVC4 326 aa5.33□□□□□ -1.56
SNRNP40-205ENST00000486941 GPR87Q9BY21 358 aa5.33□□□□□ -1.56
SNRNP40-205ENST00000486941 PANK3Q9H999 370 aa5.33□□□□□ -1.56
SNRNP40-205ENST00000486941 KCMF1Q9P0J7 381 aa5.33□□□□□ -1.56
SNRNP40-205ENST00000486941 SCN11AQ9UI33 1791 aa5.33□□□□□ -1.56
SNRNP40-205ENST00000486941 VIRMAQ69YN4 1812 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 UBA6A0AVT1 1052 aaPredicted RBP5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 SLC9A1P19634 815 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 TM4SF1P30408 202 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 CRKLP46109 303 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 SESN2P58004 480 aaPredicted RBP5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 SQSTM1Q13501 440 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 CNGB1Q14028 1251 aaPredicted RBP5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 FKBP15Q5T1M5 1219 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 MBNL2Q5VZF2 373 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 LAIR1Q6GTX8 287 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 MORC1Q86VD1 984 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 CXorf67Q86X51 503 aaPredicted RBP5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 DNAJC10Q8IXB1 793 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 DNAJC5GQ8N7S2 189 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 KIAA1958Q8N8K9 716 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 CHST14Q8NCH0 376 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 MKL1Q969V6 931 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 ZG16BQ96DA0 208 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 DYDC2Q96IM9 177 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 WDR92Q96MX6 357 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 ELF4Q99607 663 aaPredicted RBP5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 PRRX2Q99811 253 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 TCF25Q9BQ70 676 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 NRDE2Q9H7Z3 1164 aa5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 TNPO3Q9Y5L0 923 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-205ENST00000486941 USP42Q9H9J4 1324 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 CCDC88AQ3V6T2 1871 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 PCSK5Q92824 1860 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 CCDC163A0A0D9SF12 145 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 E9PSI1 815 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 PLD2O14939 933 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 RAMP2O60895 175 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 HSPA5P11021 654 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 DDR1Q08345 913 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 ARHGAP44Q17R89 818 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 GAGE13Q4V321 117 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 DALRD3Q5D0E6 543 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 RABL3Q5HYI8 236 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 TTC38Q5R3I4 469 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 SULT6B1Q6IMI4 303 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 BMP8AQ7Z5Y6 402 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 GSPT2Q8IYD1 628 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 ARMC5Q96C12 935 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 ZNF512Q96ME7 567 aaPredicted RBP5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 PITHD1Q9GZP4 211 aaPredicted RBP5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 ENKD1Q9H0I2 346 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 NMRK2Q9NPI5 230 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 ACSS2Q9NR19 701 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 SRP68Q9UHB9 627 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 KNSTRNQ9Y448 316 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 TNFRSF18Q9Y5U5 241 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 TJP1Q07157 1748 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 ADAMTS7Q9UKP4 1686 aa5.31□□□□□ -1.56
SNRNP40-205ENST00000486941 AFDNP55196 1824 aaKnown RBP5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 A0A0A6YYJ9 748 aa5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 GOLGA8BA8MQT2 603 aa5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 POLRMTO00411 1230 aaKnown RBP5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 FSTL1Q12841 308 aa5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 EPHA7Q15375 998 aa5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 FAM214AQ32MH5 1076 aa5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 PRAMEF9Q5VWM5 478 aa5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 C16orf71Q8IYS4 520 aaPredicted RBP5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 MB21D1Q8N884 522 aa5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 MDGA1Q8NFP4 955 aa5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 ATXN2LQ8WWM7 1075 aaKnown RBP5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 TUBGCP5Q96RT8 1024 aa5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 POLR3BQ9NW08 1133 aaPredicted RBP5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 H2AFY2Q9P0M6 372 aaPredicted RBP5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 B4GALT6Q9UBX8 382 aa5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 NARFQ9UHQ1 456 aa5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 WDR90Q96KV7 1748 aa5.3□□□□□ -1.56
SNRNP40-205ENST00000486941 SOS1Q07889 1333 aaPredicted RBP5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 NRXN2Q9P2S2 1712 aa5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 TNRC6CQ9HCJ0 1690 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 CBX4O00257 560 aa5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 PPP1R12AO14974 1030 aaPredicted RBP5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 RNMTO43148 476 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 CYP19A1P11511 503 aaPredicted RBP5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 CHRNA5P30532 468 aa5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 ADRA1BP35368 520 aa5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 KIR2DL3P43628 341 aa5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 NAIF1Q69YI7 327 aaPredicted RBP5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 DDX53Q86TM3 631 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 NTN5Q8WTR8 489 aaPredicted RBP5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 LENG9Q96B70 501 aa5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 MYL10Q9BUA6 226 aa5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 PCGF6Q9BYE7 350 aa5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 ZNF768Q9H5H4 540 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 ING3Q9NXR8 418 aa5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 RNF181Q9P0P0 153 aa5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 HS3ST4Q9Y661 456 aa5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 DLEC1Q9Y238 1755 aa5.29□□□□□ -1.56
SNRNP40-205ENST00000486941 COL4A3Q01955 1670 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 MRC1P22897 1456 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms