RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 TMEM63BQ5T3F8 832 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 PARP2Q9UGN5 583 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 NUMBLQ9Y6R0 609 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 MIF4GDA9UHW6 222 aaKnown RBP13.18□□□□□ -0.3
HSPG2-211ENST00000486901 CLGNO14967 610 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 FGFR1P11362 822 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 GYS1P13807 737 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 CYP11B1P15538 503 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 SLC1A5Q15758 541 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 CCDC6Q16204 474 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 SEZ6Q53EL9 994 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 SCARA3Q6AZY7 606 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 APOBEC3HQ6NTF7 200 aaKnown RBP13.18□□□□□ -0.3
HSPG2-211ENST00000486901 MTDHQ86UE4 582 aaKnown RBP13.18□□□□□ -0.3
HSPG2-211ENST00000486901 FAM13CQ8NE31 585 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 TBC1D10AQ9BXI6 508 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 ARHGEF3Q9NR81 526 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 ZNF148Q9UQR1 794 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 CYP3A7-CYP3A51PA0A087WV96 503 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 CLRN2A0PK11 232 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 ZBED4O75132 1171 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 SMIM24O75264 130 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 GALNTL6Q49A17 601 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 RNF220Q5VTB9 566 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 MIS18BP1Q6P0N0 1132 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 ARMC2Q8NEN0 867 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 ZNF483Q8TF39 744 aaPredicted RBP13.17□□□□□ -0.3
HSPG2-211ENST00000486901 SNF8Q96H20 258 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 LRRC4BQ9NT99 713 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 CNOT7Q9UIV1 285 aaKnown RBP13.17□□□□□ -0.3
HSPG2-211ENST00000486901 PRR12Q9ULL5 1215 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 LINGO3P0C6S8 592 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 PLS3P13797 630 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 ATP2B4P23634 1241 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 SREBF1P36956 1147 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 MXRA7P84157 204 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 KIF22Q14807 665 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 ZBED8Q8IZ13 594 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 LRRN4Q8WUT4 740 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 RUNDC3BQ96NL0 473 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 RPS6KC1Q96S38 1066 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 WDR11Q9BZH6 1224 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 OLFML3Q9NRN5 406 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 DLGAP2Q9P1A6 1054 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 LAMB1P07942 1786 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 MYH11P35749 1972 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 UNC5CO95185 931 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 TAS2R40P59535 323 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 SARNPP82979 210 aaKnown RBP13.17□□□□□ -0.3
HSPG2-211ENST00000486901 ABCB5Q2M3G0 1257 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 C1orf220Q5T0J3 134 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 SH3BP5LQ7L8J4 393 aa13.17□□□□□ -0.3
HSPG2-211ENST00000486901 FBXO6Q9NRD1 293 aaPredicted RBP13.17□□□□□ -0.3
HSPG2-211ENST00000486901 FRMPD4Q14CM0 1322 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 TCP10L2B9ZVM9 353 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 OAS1P00973 400 aaKnown RBP13.16□□□□□ -0.3
HSPG2-211ENST00000486901 IL1R1P14778 569 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 RFC5P40937 340 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 POLE2P56282 527 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 MUM1Q2TAK8 710 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 PCNX4Q63HM2 1172 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 MAGEC3Q8TD91 643 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 TEKT1Q969V4 418 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 FAM20AQ96MK3 541 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 WNT8AQ9H1J5 351 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 ARMCX1Q9P291 453 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 PHLPP1O60346 1717 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 SMNDC1O75940 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
HSPG2-211ENST00000486901 CRKP46108 304 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 SEPT7Q16181 437 aaKnown RBP13.16□□□□□ -0.3
HSPG2-211ENST00000486901 HHATQ5VTY9 493 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 ARHGEF18Q6ZSZ5 1173 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 SCYL3Q8IZE3 742 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 TRABDQ9H4I3 376 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 DENND2DQ9H6A0 471 aaPredicted RBP13.16□□□□□ -0.3
HSPG2-211ENST00000486901 GAKO14976 1311 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 IGLV3-22A0A075B6J6 115 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 GTPBP10A4D1E9 387 aaKnown RBP13.16□□□□□ -0.3
HSPG2-211ENST00000486901 IPO5O00410 1097 aaKnown RBP13.16□□□□□ -0.3
HSPG2-211ENST00000486901 GAS8O95995 478 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 GAP43P17677 238 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 MAGEA4P43358 317 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 IL9RQ01113 521 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 SGSM1Q2NKQ1 1148 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 DSTYKQ6XUX3 929 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 HAUS6Q7Z4H7 955 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 CDAN1Q8IWY9 1227 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 IL31RAQ8NI17 732 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 SYT15Q9BQS2 421 aa13.16□□□□□ -0.3
HSPG2-211ENST00000486901 NOCTQ9UK39 431 aaKnown RBP13.16□□□□□ -0.3
HSPG2-211ENST00000486901 MYCLP12524 364 aaPredicted RBP13.15□□□□□ -0.3
HSPG2-211ENST00000486901 CYP3A7P24462 503 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 ADRA1DP25100 572 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 PRELPP51888 382 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 DRG2P55039 364 aaKnown RBP13.15□□□□□ -0.3
HSPG2-211ENST00000486901 SATB1Q01826 763 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 GPS1Q13098 491 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 BMT2Q1RMZ1 405 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 TMEM154Q6P9G4 183 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 CRELD2Q6UXH1 353 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms