RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 DUSP6Q16828 381 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 CTC1Q2NKJ3 1217 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 KANK3Q6NY19 840 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 DCLRE1AQ6PJP8 1040 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 RABGGTAQ92696 567 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 ZMAT2Q96NC0 199 aaKnown RBP13.56□□□□□ -0.24
HMG20B-211ENST00000486028 ASB2Q96Q27 587 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 VN1R3Q9BXE9 311 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 FGFBP2Q9BYJ0 223 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 ZBP1Q9H171 429 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 GOLPH3LQ9H4A5 285 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 MRPL17Q9NRX2 175 aaKnown RBP13.56□□□□□ -0.24
HMG20B-211ENST00000486028 CLDND1Q9NY35 253 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 ADAM28Q9UKQ2 775 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 SSX2IPQ9Y2D8 614 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.56□□□□□ -0.24
HMG20B-211ENST00000486028 PLXNA4Q9HCM2 1894 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.55□□□□□ -0.24
HMG20B-211ENST00000486028 TTC26A0AVF1 554 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 TISP43B9A030 160 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 F8W810 466 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 FAM189A1O60320 539 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 B3GAT3O94766 335 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 GARTP22102 1010 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 KCNA5P22460 613 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 ADSSP30520 456 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 RPL9P32969 192 aaKnown RBP13.55□□□□□ -0.24
HMG20B-211ENST00000486028 GTF2F1P35269 517 aaKnown RBP eCLIP13.55□□□□□ -0.24
HMG20B-211ENST00000486028 TNFSF9P41273 254 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 ACOT2P49753 483 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 POU5F1Q01860 360 aaKnown RBP13.55□□□□□ -0.24
HMG20B-211ENST00000486028 TFF2Q03403 129 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 PPP2R3AQ06190 1150 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 EHHADHQ08426 723 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 PSMD2Q13200 908 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 ENOX2Q16206 610 aaKnown RBP13.55□□□□□ -0.24
HMG20B-211ENST00000486028 ZBTB41Q5SVQ8 909 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 KIAA1841Q6NSI8 718 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 FUT10Q6P4F1 479 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 KRBA2Q6ZNG9 492 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 EPM2AIP1Q7L775 607 aaPredicted RBP13.55□□□□□ -0.24
HMG20B-211ENST00000486028 CD302Q8IX05 232 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 ZNF507Q8TCN5 953 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 CCDC47Q96A33 483 aaKnown RBP13.55□□□□□ -0.24
HMG20B-211ENST00000486028 KIF12Q96FN5 646 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 PAAF1Q9BRP4 392 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 HERC2P3Q9BVR0 1158 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 EMILIN2Q9BXX0 1053 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 IKZF4Q9H2S9 585 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 EXOC1Q9NV70 894 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 CACNG4Q9UBN1 327 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 CPSF3Q9UKF6 684 aaKnown RBP13.55□□□□□ -0.24
HMG20B-211ENST00000486028 IRAK3Q9Y616 596 aa13.55□□□□□ -0.24
HMG20B-211ENST00000486028 SF3B1O75533 1304 aaKnown RBP eCLIP13.55□□□□□ -0.24
HMG20B-211ENST00000486028 LACTBL1A8MY62 500 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 TMEM189-UBE2V1I3L0A0 370 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 MEFVO15553 781 aaPredicted RBP13.54□□□□□ -0.24
HMG20B-211ENST00000486028 XPOTO43592 962 aaKnown RBP13.54□□□□□ -0.24
HMG20B-211ENST00000486028 KLRC4O43908 158 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 KIF4AO95239 1232 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 EFEMP2O95967 443 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 URODP06132 367 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 ADRB2P07550 413 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 SRGAP2BP0DMP2 458 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 GLUD2P49448 558 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 CLCNKBP51801 687 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 ELAVL2Q12926 359 aaKnown RBP13.54□□□□□ -0.24
HMG20B-211ENST00000486028 UPP1Q16831 310 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 USP41Q3LFD5 358 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 LEXMQ3ZCV2 418 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 TAS1R1Q7RTX1 841 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 FMR1NBQ8N0W7 255 aaPredicted RBP13.54□□□□□ -0.24
HMG20B-211ENST00000486028 GLIS3Q8NEA6 775 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 AUTS2Q8WXX7 1259 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 C18orf25Q96B23 403 aaPredicted RBP13.54□□□□□ -0.24
HMG20B-211ENST00000486028 FAM213AQ9BRX8 229 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 GPR62Q9BZJ7 368 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 SLC39A2Q9NP94 309 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 UBE4BO95155 1302 aa13.54□□□□□ -0.24
HMG20B-211ENST00000486028 TDRD15B5MCY1 1934 aaKnown RBP13.54□□□□□ -0.24
HMG20B-211ENST00000486028 C2CD2LO14523 706 aa13.53□□□□□ -0.24
HMG20B-211ENST00000486028 KIAA0391O15091 583 aaKnown RBP13.53□□□□□ -0.24
HMG20B-211ENST00000486028 LINC01565O15544 149 aa13.53□□□□□ -0.24
HMG20B-211ENST00000486028 TRAPPC3O43617 180 aa13.53□□□□□ -0.24
HMG20B-211ENST00000486028 LILRB3O75022 631 aa13.53□□□□□ -0.24
HMG20B-211ENST00000486028 CLASP2O75122 1294 aaKnown RBP13.53□□□□□ -0.24
HMG20B-211ENST00000486028 LDHAP00338 332 aaKnown RBP13.53□□□□□ -0.24
HMG20B-211ENST00000486028 RPN1P04843 607 aaKnown RBP13.53□□□□□ -0.24
HMG20B-211ENST00000486028 HOXD13P35453 343 aa13.53□□□□□ -0.24
HMG20B-211ENST00000486028 NDUFV1P49821 464 aa13.53□□□□□ -0.24
HMG20B-211ENST00000486028 SNRPFP62306 86 aaKnown RBP13.53□□□□□ -0.24
HMG20B-211ENST00000486028 FAM160A1Q05DH4 1040 aa13.53□□□□□ -0.24
HMG20B-211ENST00000486028 SOX4Q06945 474 aaPredicted RBP13.53□□□□□ -0.24
HMG20B-211ENST00000486028 SPAG1Q07617 926 aa13.53□□□□□ -0.24
HMG20B-211ENST00000486028 PTPN14Q15678 1187 aa13.53□□□□□ -0.24
HMG20B-211ENST00000486028 ZBTB6Q15916 424 aa13.53□□□□□ -0.24
HMG20B-211ENST00000486028 PUS10Q3MIT2 529 aaKnown RBP13.53□□□□□ -0.24
HMG20B-211ENST00000486028 KMT5BQ4FZB7 885 aa13.53□□□□□ -0.24
HMG20B-211ENST00000486028 TJAP1Q5JTD0 557 aa13.53□□□□□ -0.24
HMG20B-211ENST00000486028 KIAA0319Q5VV43 1072 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms