RNA–Protein interactions for RNA: ENST00000485804.5

SPIN1-206, Transcript of spindlin 1, humanhuman

TSL 3

Gene SPIN1, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-206ENST00000485804 POLD4Q9HCU8 107 aa20.8■□□□□ 0.92
SPIN1-206ENST00000485804 FANCMQ8IYD8 2048 aa20.8■□□□□ 0.92
SPIN1-206ENST00000485804 CACNA1IQ9P0X4 2223 aa20.8■□□□□ 0.92
SPIN1-206ENST00000485804 U2AF2P26368 475 aaKnown RBP eCLIP20.79■□□□□ 0.921e-6■■■■□ 19.9
SPIN1-206ENST00000485804 RPA1P27694 616 aa20.79■□□□□ 0.92
SPIN1-206ENST00000485804 ELF1P32519 619 aa20.79■□□□□ 0.92
SPIN1-206ENST00000485804 CLCNKBP51801 687 aa20.79■□□□□ 0.92
SPIN1-206ENST00000485804 CSTF1Q05048 431 aaKnown RBP20.79■□□□□ 0.92
SPIN1-206ENST00000485804 APBB1IPQ7Z5R6 666 aaPredicted RBP20.79■□□□□ 0.92
SPIN1-206ENST00000485804 C4orf32Q8N8J7 132 aa20.79■□□□□ 0.92
SPIN1-206ENST00000485804 MCRS1Q96EZ8 462 aa20.79■□□□□ 0.92
SPIN1-206ENST00000485804 KIFC3Q9BVG8 833 aa20.79■□□□□ 0.92
SPIN1-206ENST00000485804 NCDNQ9UBB6 729 aa20.79■□□□□ 0.92
SPIN1-206ENST00000485804 DNMT3BQ9UBC3 853 aaKnown RBP20.79■□□□□ 0.92
SPIN1-206ENST00000485804 MTF2Q9Y483 593 aaPredicted RBP20.79■□□□□ 0.92
SPIN1-206ENST00000485804 COL4A3Q01955 1670 aa20.79■□□□□ 0.92
SPIN1-206ENST00000485804 TRAPPC3O43617 180 aa20.78■□□□□ 0.92
SPIN1-206ENST00000485804 CYP11B2P19099 503 aa20.78■□□□□ 0.92
SPIN1-206ENST00000485804 TKTP29401 623 aaKnown RBP20.78■□□□□ 0.92
SPIN1-206ENST00000485804 ARPP19P56211 112 aa20.78■□□□□ 0.92
SPIN1-206ENST00000485804 NAB2Q15742 525 aa20.78■□□□□ 0.92
SPIN1-206ENST00000485804 TPRG1Q6ZUI0 275 aa20.78■□□□□ 0.92
SPIN1-206ENST00000485804 CCDC83Q8IWF9 413 aa20.78■□□□□ 0.92
SPIN1-206ENST00000485804 NPAS3Q8IXF0 933 aa20.78■□□□□ 0.92
SPIN1-206ENST00000485804 MTRRQ9UBK8 725 aa20.78■□□□□ 0.92
SPIN1-206ENST00000485804 I3L4J1 428 aa20.77■□□□□ 0.92
SPIN1-206ENST00000485804 LRG1P02750 347 aa20.77■□□□□ 0.92
SPIN1-206ENST00000485804 CENPBP07199 599 aaPredicted RBP20.77■□□□□ 0.92
SPIN1-206ENST00000485804 OR52Z1P0C646 297 aa20.77■□□□□ 0.92
SPIN1-206ENST00000485804 FGFR3P22607 806 aa20.77■□□□□ 0.92
SPIN1-206ENST00000485804 FXR2P51116 673 aaKnown RBP eCLIP20.77■□□□□ 0.92
SPIN1-206ENST00000485804 YARSP54577 528 aaKnown RBP20.77■□□□□ 0.92
SPIN1-206ENST00000485804 PUM1Q14671 1186 aaKnown RBP eCLIP20.77■□□□□ 0.92
SPIN1-206ENST00000485804 ZNF174Q15697 407 aa20.77■□□□□ 0.92
SPIN1-206ENST00000485804 ZBTB41Q5SVQ8 909 aa20.77■□□□□ 0.92
SPIN1-206ENST00000485804 ATF7IP2Q5U623 682 aa20.77■□□□□ 0.92
SPIN1-206ENST00000485804 ANKS3Q6ZW76 656 aa20.77■□□□□ 0.92
SPIN1-206ENST00000485804 ATRIPQ8WXE1 791 aa20.77■□□□□ 0.92
SPIN1-206ENST00000485804 UROC1Q96N76 676 aa20.77■□□□□ 0.92
SPIN1-206ENST00000485804 CCDC113Q9H0I3 377 aa20.77■□□□□ 0.92
SPIN1-206ENST00000485804 GOLGA2P5Q9HBQ8 144 aa20.77■□□□□ 0.92
SPIN1-206ENST00000485804 LTB4R2Q9NPC1 389 aa20.77■□□□□ 0.92
SPIN1-206ENST00000485804 KCNH3Q9ULD8 1083 aa20.77■□□□□ 0.92
SPIN1-206ENST00000485804 PRRG1O14668 218 aa20.76■□□□□ 0.91
SPIN1-206ENST00000485804 NCAM2O15394 837 aa20.76■□□□□ 0.91
SPIN1-206ENST00000485804 EDN1P05305 212 aa20.76■□□□□ 0.91
SPIN1-206ENST00000485804 RHOP08100 348 aa20.76■□□□□ 0.91
SPIN1-206ENST00000485804 BRCC3P46736 316 aa20.76■□□□□ 0.91
SPIN1-206ENST00000485804 EFNA5P52803 228 aa20.76■□□□□ 0.91
SPIN1-206ENST00000485804 OSTNP61366 133 aa20.76■□□□□ 0.91
SPIN1-206ENST00000485804 GNL2Q13823 731 aaKnown RBP20.76■□□□□ 0.91
SPIN1-206ENST00000485804 HAUS3Q68CZ6 603 aa20.76■□□□□ 0.91
SPIN1-206ENST00000485804 MAML2Q8IZL2 1156 aaPredicted RBP20.76■□□□□ 0.91
SPIN1-206ENST00000485804 FBXO4Q9UKT5 387 aa20.76■□□□□ 0.91
SPIN1-206ENST00000485804 GVINP1Q7Z2Y8 2422 aa20.76■□□□□ 0.91
SPIN1-206ENST00000485804 NOTCH4Q99466 2003 aa20.75■□□□□ 0.91
SPIN1-206ENST00000485804 EP300Q09472 2414 aaPredicted RBP20.75■□□□□ 0.91
SPIN1-206ENST00000485804 MED19A0JLT2 244 aaPredicted RBP20.75■□□□□ 0.91
SPIN1-206ENST00000485804 CCDC169A6NNP5 214 aa20.75■□□□□ 0.91
SPIN1-206ENST00000485804 TMEM189-UBE2V1I3L0A0 370 aa20.75■□□□□ 0.91
SPIN1-206ENST00000485804 K7ERI5 159 aa20.75■□□□□ 0.91
SPIN1-206ENST00000485804 IGFBP6P24592 240 aaPredicted RBP20.75■□□□□ 0.91
SPIN1-206ENST00000485804 CCT6AP40227 531 aaKnown RBP20.75■□□□□ 0.91
SPIN1-206ENST00000485804 PDIA5Q14554 519 aa20.75■□□□□ 0.91
SPIN1-206ENST00000485804 RSPO2Q6UXX9 243 aaPredicted RBP20.75■□□□□ 0.91
SPIN1-206ENST00000485804 DDX27Q96GQ7 796 aaKnown RBP20.75■□□□□ 0.91
SPIN1-206ENST00000485804 PPP1R10Q96QC0 940 aaKnown RBP20.75■□□□□ 0.91
SPIN1-206ENST00000485804 DDX23Q9BUQ8 820 aaKnown RBP20.75■□□□□ 0.91
SPIN1-206ENST00000485804 CCDC94Q9BW85 323 aaPredicted RBP20.75■□□□□ 0.91
SPIN1-206ENST00000485804 OSBPL6Q9BZF3 934 aa20.75■□□□□ 0.91
SPIN1-206ENST00000485804 BACE2Q9Y5Z0 518 aa20.75■□□□□ 0.91
SPIN1-206ENST00000485804 PATJQ8NI35 1801 aa20.75■□□□□ 0.91
SPIN1-206ENST00000485804 DCHS1Q96JQ0 3298 aa20.74■□□□□ 0.91
SPIN1-206ENST00000485804 POU2F2P09086 479 aa20.74■□□□□ 0.91
SPIN1-206ENST00000485804 PTPN2P17706 415 aa20.74■□□□□ 0.91
SPIN1-206ENST00000485804 MAGEA9P43362 315 aa20.74■□□□□ 0.91
SPIN1-206ENST00000485804 UPP1Q16831 310 aa20.74■□□□□ 0.91
SPIN1-206ENST00000485804 ZNF528Q3MIS6 628 aa20.74■□□□□ 0.91
SPIN1-206ENST00000485804 TTC38Q5R3I4 469 aa20.74■□□□□ 0.91
SPIN1-206ENST00000485804 VARS2Q5ST30 1063 aaKnown RBP20.74■□□□□ 0.91
SPIN1-206ENST00000485804 NT5DC1Q5TFE4 455 aa20.74■□□□□ 0.91
SPIN1-206ENST00000485804 IGSF22Q8N9C0 903 aa20.74■□□□□ 0.91
SPIN1-206ENST00000485804 KIFAP3Q92845 792 aa20.74■□□□□ 0.91
SPIN1-206ENST00000485804 SECISBP2LQ93073 1101 aaKnown RBP20.74■□□□□ 0.91
SPIN1-206ENST00000485804 CORO1BQ9BR76 489 aa20.74■□□□□ 0.91
SPIN1-206ENST00000485804 BHMT2Q9H2M3 363 aa20.74■□□□□ 0.91
SPIN1-206ENST00000485804 TOPORSQ9NS56 1045 aaPredicted RBP20.74■□□□□ 0.91
SPIN1-206ENST00000485804 MRPS17Q9Y2R5 130 aaKnown RBP20.74■□□□□ 0.91
SPIN1-206ENST00000485804 SPTLC1O15269 473 aa20.73■□□□□ 0.91
SPIN1-206ENST00000485804 ECI2O75521 394 aa20.73■□□□□ 0.91
SPIN1-206ENST00000485804 CEBPBP17676 345 aa20.73■□□□□ 0.91
SPIN1-206ENST00000485804 TARSP26639 723 aaKnown RBP20.73■□□□□ 0.91
SPIN1-206ENST00000485804 SLC5A9Q2M3M2 681 aa20.73■□□□□ 0.91
SPIN1-206ENST00000485804 ZNF568Q3ZCX4 644 aa20.73■□□□□ 0.91
SPIN1-206ENST00000485804 ZNF852Q6ZMS4 543 aa20.73■□□□□ 0.91
SPIN1-206ENST00000485804 RTL10Q7L3V2 364 aa20.73■□□□□ 0.91
SPIN1-206ENST00000485804 SUMF1Q8NBK3 374 aa20.73■□□□□ 0.91
SPIN1-206ENST00000485804 NELL2Q99435 816 aa20.73■□□□□ 0.91
SPIN1-206ENST00000485804 TCHPQ9BT92 498 aa20.73■□□□□ 0.91
SPIN1-206ENST00000485804 PLA2G2FQ9BZM2 168 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms