RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 C18orf25Q96B23 403 aaPredicted RBP19.78■□□□□ 0.76
ATG4B-221ENST00000483778 HCFC1R1Q9NWW0 138 aa19.78■□□□□ 0.76
ATG4B-221ENST00000483778 FBXL21Q9UKT6 434 aa19.78■□□□□ 0.76
ATG4B-221ENST00000483778 ANHXE9PGG2 379 aa19.77■□□□□ 0.76
ATG4B-221ENST00000483778 TMEM189-UBE2V1I3L0A0 370 aa19.77■□□□□ 0.76
ATG4B-221ENST00000483778 C8AP07357 584 aa19.77■□□□□ 0.76
ATG4B-221ENST00000483778 PROZP22891 400 aa19.77■□□□□ 0.76
ATG4B-221ENST00000483778 GJB2P29033 226 aa19.77■□□□□ 0.76
ATG4B-221ENST00000483778 ATP2C1P98194 919 aaPredicted RBP19.77■□□□□ 0.76
ATG4B-221ENST00000483778 CREMQ03060 361 aa19.77■□□□□ 0.76
ATG4B-221ENST00000483778 HTR4Q13639 388 aa19.77■□□□□ 0.76
ATG4B-221ENST00000483778 RAB33AQ14088 237 aa19.77■□□□□ 0.76
ATG4B-221ENST00000483778 ZNF568Q3ZCX4 644 aa19.77■□□□□ 0.76
ATG4B-221ENST00000483778 AXDND1Q5T1B0 1012 aaPredicted RBP19.77■□□□□ 0.76
ATG4B-221ENST00000483778 POTEHQ6S545 545 aa19.77■□□□□ 0.76
ATG4B-221ENST00000483778 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.77■□□□□ 0.76
ATG4B-221ENST00000483778 ITFG1Q8TB96 612 aa19.77■□□□□ 0.76
ATG4B-221ENST00000483778 STAMQ92783 540 aa19.77■□□□□ 0.76
ATG4B-221ENST00000483778 DDX27Q96GQ7 796 aaKnown RBP19.77■□□□□ 0.76
ATG4B-221ENST00000483778 RAB34Q9BZG1 259 aa19.77■□□□□ 0.76
ATG4B-221ENST00000483778 CA14Q9ULX7 337 aa19.77■□□□□ 0.76
ATG4B-221ENST00000483778 CACNA1IQ9P0X4 2223 aa19.77■□□□□ 0.76
ATG4B-221ENST00000483778 PHLPP2Q6ZVD8 1323 aa19.76■□□□□ 0.75
ATG4B-221ENST00000483778 LAD1O00515 517 aa19.76■□□□□ 0.75
ATG4B-221ENST00000483778 AOC1P19801 751 aa19.76■□□□□ 0.75
ATG4B-221ENST00000483778 FSHRP23945 695 aa19.76■□□□□ 0.75
ATG4B-221ENST00000483778 NUBP1P53384 320 aa19.76■□□□□ 0.75
ATG4B-221ENST00000483778 CACNB1Q02641 598 aaPredicted RBP19.76■□□□□ 0.75
ATG4B-221ENST00000483778 ARSHQ5FYA8 562 aa19.76■□□□□ 0.75
ATG4B-221ENST00000483778 PPM1LQ5SGD2 360 aa19.76■□□□□ 0.75
ATG4B-221ENST00000483778 HYIQ5T013 277 aa19.76■□□□□ 0.75
ATG4B-221ENST00000483778 PARM1Q6UWI2 310 aa19.76■□□□□ 0.75
ATG4B-221ENST00000483778 SLC7A14Q8TBB6 771 aa19.76■□□□□ 0.75
ATG4B-221ENST00000483778 NTPCRQ9BSD7 190 aaKnown RBP19.76■□□□□ 0.75
ATG4B-221ENST00000483778 MRPL4Q9BYD3 311 aaKnown RBP19.76■□□□□ 0.75
ATG4B-221ENST00000483778 HAPLN2Q9GZV7 340 aa19.76■□□□□ 0.75
ATG4B-221ENST00000483778 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.76■□□□□ 0.754e-14■■□□□ 13.9
ATG4B-221ENST00000483778 MTRRQ9UBK8 725 aa19.76■□□□□ 0.75
ATG4B-221ENST00000483778 STK24Q9Y6E0 443 aa19.76■□□□□ 0.75
ATG4B-221ENST00000483778 CDY1Q9Y6F8 540 aa19.76■□□□□ 0.75
ATG4B-221ENST00000483778 FAM186AA6NE01 2351 aa19.75■□□□□ 0.75
ATG4B-221ENST00000483778 VWA3AA6NCI4 1184 aa19.75■□□□□ 0.75
ATG4B-221ENST00000483778 HARSP12081 509 aaKnown RBP19.75■□□□□ 0.75
ATG4B-221ENST00000483778 SLC12A3P55017 1021 aa19.75■□□□□ 0.75
ATG4B-221ENST00000483778 ELAVL2Q12926 359 aaKnown RBP19.75■□□□□ 0.75
ATG4B-221ENST00000483778 DMP1Q13316 513 aaPredicted RBP19.75■□□□□ 0.75
ATG4B-221ENST00000483778 ASCL5Q7RTU5 278 aa19.75■□□□□ 0.75
ATG4B-221ENST00000483778 SYT2Q8N9I0 419 aaPredicted RBP19.75■□□□□ 0.75
ATG4B-221ENST00000483778 TMEM161BQ8NDZ6 487 aa19.75■□□□□ 0.75
ATG4B-221ENST00000483778 GPR152Q8TDT2 470 aa19.75■□□□□ 0.75
ATG4B-221ENST00000483778 FGF14Q92915 247 aa19.75■□□□□ 0.75
ATG4B-221ENST00000483778 SNX27Q96L92 541 aa19.75■□□□□ 0.75
ATG4B-221ENST00000483778 DRC1Q96MC2 740 aa19.75■□□□□ 0.75
ATG4B-221ENST00000483778 CCDC94Q9BW85 323 aaPredicted RBP19.75■□□□□ 0.75
ATG4B-221ENST00000483778 WNT16Q9UBV4 365 aa19.75■□□□□ 0.75
ATG4B-221ENST00000483778 POLIQ9UNA4 740 aa19.75■□□□□ 0.75
ATG4B-221ENST00000483778 RBM19Q9Y4C8 960 aaKnown RBP19.75■□□□□ 0.75
ATG4B-221ENST00000483778 NUMBLQ9Y6R0 609 aa19.75■□□□□ 0.75
ATG4B-221ENST00000483778 MYO15AQ9UKN7 3530 aa19.75■□□□□ 0.75
ATG4B-221ENST00000483778 GFRA3O60609 400 aa19.74■□□□□ 0.75
ATG4B-221ENST00000483778 HNRNPA1P09651 372 aaKnown RBP eCLIP19.74■□□□□ 0.75
ATG4B-221ENST00000483778 GUCY2CP25092 1073 aa19.74■□□□□ 0.75
ATG4B-221ENST00000483778 SLC10A6Q3KNW5 377 aa19.74■□□□□ 0.75
ATG4B-221ENST00000483778 RILPL1Q5EBL4 403 aa19.74■□□□□ 0.75
ATG4B-221ENST00000483778 MPZL3Q6UWV2 235 aa19.74■□□□□ 0.75
ATG4B-221ENST00000483778 ACAP3Q96P50 834 aa19.74■□□□□ 0.75
ATG4B-221ENST00000483778 TCHPQ9BT92 498 aa19.74■□□□□ 0.75
ATG4B-221ENST00000483778 DNMT3BQ9UBC3 853 aaKnown RBP19.74■□□□□ 0.75
ATG4B-221ENST00000483778 SPTBN4Q9H254 2564 aa19.73■□□□□ 0.75
ATG4B-221ENST00000483778 PLA2G4BP0C869 781 aa19.73■□□□□ 0.75
ATG4B-221ENST00000483778 MAPTP10636 758 aaKnown RBP19.73■□□□□ 0.75
ATG4B-221ENST00000483778 MCF2P10911 925 aa19.73■□□□□ 0.75
ATG4B-221ENST00000483778 SRFP11831 508 aa19.73■□□□□ 0.75
ATG4B-221ENST00000483778 KCNE1P15382 129 aa19.73■□□□□ 0.75
ATG4B-221ENST00000483778 GRIN1Q05586 938 aa19.73■□□□□ 0.75
ATG4B-221ENST00000483778 TMEM119Q4V9L6 283 aa19.73■□□□□ 0.75
ATG4B-221ENST00000483778 LIN9Q5TKA1 542 aa19.73■□□□□ 0.75
ATG4B-221ENST00000483778 DTWD2Q8NBA8 298 aa19.73■□□□□ 0.75
ATG4B-221ENST00000483778 FGF13Q92913 245 aa19.73■□□□□ 0.75
ATG4B-221ENST00000483778 UROC1Q96N76 676 aa19.73■□□□□ 0.75
ATG4B-221ENST00000483778 CDH7Q9ULB5 785 aa19.73■□□□□ 0.75
ATG4B-221ENST00000483778 BACE2Q9Y5Z0 518 aa19.73■□□□□ 0.75
ATG4B-221ENST00000483778 PROB1E7EW31 1015 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 STK25O00506 426 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 PODXLO00592 558 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 ST18O60284 1047 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 TBC1D4O60343 1298 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 PLS3P13797 630 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 YARSP54577 528 aaKnown RBP19.72■□□□□ 0.75
ATG4B-221ENST00000483778 GPC5P78333 572 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 SPAG1Q07617 926 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 VARS2Q5ST30 1063 aaKnown RBP19.72■□□□□ 0.75
ATG4B-221ENST00000483778 PDXDC1Q6P996 788 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 APBB1IPQ7Z5R6 666 aaPredicted RBP19.72■□□□□ 0.75
ATG4B-221ENST00000483778 FRMD5Q7Z6J6 570 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 CCDC105Q8IYK2 499 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 SPIRE2Q8WWL2 714 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 ING5Q8WYH8 240 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 NXPE3Q969Y0 559 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 IRF2BPLQ9H1B7 796 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms