RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 THPOP40225 353 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 LBX1P52954 281 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 AP3M2P53677 418 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 NCBP1Q09161 790 aaKnown RBP10.91□□□□□ -0.66
HDAC6-226ENST00000483656 RAPGEF1Q13905 1077 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 DRAP1Q14919 205 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-226ENST00000483656 KYAT1Q16773 422 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 TSR1Q2NL82 804 aaKnown RBP10.91□□□□□ -0.66
HDAC6-226ENST00000483656 ASTE1Q2TB18 679 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-226ENST00000483656 FBXO47Q5MNV8 452 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 TRAPPC11Q7Z392 1133 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 REXO1L1PQ8IX06 675 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 OLIG1Q8TAK6 271 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 CXorf38Q8TB03 319 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 ADPGKQ9BRR6 497 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 DESI2Q9BSY9 194 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 RNF208Q9H0X6 261 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 NUCKS1Q9H1E3 243 aaKnown RBP10.91□□□□□ -0.66
HDAC6-226ENST00000483656 NHEJ1Q9H9Q4 299 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-226ENST00000483656 APOBEC3GQ9HC16 384 aaKnown RBP10.91□□□□□ -0.66
HDAC6-226ENST00000483656 ERVK-5Q9HDB9 667 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 UBE2TQ9NPD8 197 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-226ENST00000483656 ZNHIT6Q9NWK9 470 aaKnown RBP10.91□□□□□ -0.66
HDAC6-226ENST00000483656 TRMT1Q9NXH9 659 aaKnown RBP10.91□□□□□ -0.66
HDAC6-226ENST00000483656 SNTG2Q9NY99 539 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 ST3GAL5Q9UNP4 418 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 PIN4Q9Y237 131 aaKnown RBP10.91□□□□□ -0.66
HDAC6-226ENST00000483656 DAAM1Q9Y4D1 1078 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 ADGRG1Q9Y653 693 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 EPN1Q9Y6I3 576 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-226ENST00000483656 DNAH12Q6ZR08 3092 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 A0A0U1RQJ8 604 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 F8VZ95 297 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 M0QZ92 97 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 FOXN3O00409 490 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-226ENST00000483656 ZNF263O14978 683 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 RPS6KA5O75582 802 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 SERPING1P05155 500 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 NFICP08651 508 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 RFX1P22670 979 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 EIF4A3P38919 411 aaKnown RBP10.9□□□□□ -0.66
HDAC6-226ENST00000483656 MAPK8IP2Q13387 824 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-226ENST00000483656 BIRC3Q13489 604 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 LPIN1Q14693 890 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 ASIC2Q16515 512 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 ARHGAP44Q17R89 818 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 DUOXA2Q1HG44 320 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 ZNF618Q5T7W0 954 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 JADE1Q6IE81 842 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 SPOPLQ6IQ16 392 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 FBXO46Q6PJ61 603 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-226ENST00000483656 ALKAL1Q6UXT8 129 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 SMG8Q8ND04 991 aaKnown RBP10.9□□□□□ -0.66
HDAC6-226ENST00000483656 ACRBPQ8NEB7 543 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 ATRIPQ8WXE1 791 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 ZNF333Q96JL9 665 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 PPP1R13BQ96KQ4 1090 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 NT5C1BQ96P26 610 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 ACAP3Q96P50 834 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 SPAG5Q96R06 1193 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 MTMR12Q9C0I1 747 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 CRISPLD2Q9H0B8 497 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 RNF39Q9H2S5 420 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 ASB7Q9H672 318 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 PPP2R2CQ9Y2T4 447 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 HES2Q9Y543 173 aa10.9□□□□□ -0.66
HDAC6-226ENST00000483656 UMODL1Q5DID0 1318 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 PDE4DIPQ5VU43 2346 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 SSU72P8A0A1W2PR75 194 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 EIF3CLB5ME19 914 aaKnown RBP10.89□□□□□ -0.67
HDAC6-226ENST00000483656 ZC3H11AO75152 810 aaKnown RBP eCLIP10.89□□□□□ -0.67
HDAC6-226ENST00000483656 CAND2O75155 1236 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 GFPT2O94808 682 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 NDUFA10O95299 355 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 CD4P01730 458 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 CKBP12277 381 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 CD52P31358 61 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 SOX5P35711 763 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 PRKCIP41743 596 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 STAT1P42224 750 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 PIK3CAP42336 1068 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 MYL6P60660 151 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 TFAMQ00059 246 aaKnown RBP10.89□□□□□ -0.67
HDAC6-226ENST00000483656 ARID5AQ03989 594 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 NCOA4Q13772 614 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 DSC3Q14574 896 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 MBTPS1Q14703 1052 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 ZNF571Q7Z3V5 609 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-226ENST00000483656 FAM126BQ8IXS8 530 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 CCDC170Q8IYT3 715 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 C1orf127Q8N9H9 656 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 ARMC5Q96C12 935 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 SNX27Q96L92 541 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 ZMAT2Q96NC0 199 aaKnown RBP10.89□□□□□ -0.67
HDAC6-226ENST00000483656 EIF3CQ99613 913 aaKnown RBP10.89□□□□□ -0.67
HDAC6-226ENST00000483656 SYT11Q9BT88 431 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 CCDC94Q9BW85 323 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-226ENST00000483656 NXF3Q9H4D5 531 aaKnown RBP10.89□□□□□ -0.67
HDAC6-226ENST00000483656 SIX4Q9UIU6 781 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 PADI3Q9ULW8 664 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms