RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 CUL2Q13617 745 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 NCOA4Q13772 614 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 CLEC16AQ2KHT3 1053 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 DUSP28Q4G0W2 176 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 GLIPR1L2Q4G1C9 344 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 TAF3Q5VWG9 929 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 ACAD10Q6JQN1 1059 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 APBB1IPQ7Z5R6 666 aaPredicted RBP12.8□□□□□ -0.36
SND1-210ENST00000483503 SLC47A2Q86VL8 602 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 UBL4BQ8N7F7 174 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 USP38Q8NB14 1042 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 AFG1LQ8WV93 481 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 RPS6KC1Q96S38 1066 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.8□□□□□ -0.367e-14■□□□□ 11
SND1-210ENST00000483503 TINF2Q9BSI4 451 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 FUT8Q9BYC5 575 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 INO80BQ9C086 356 aaPredicted RBP12.8□□□□□ -0.36
SND1-210ENST00000483503 KATNBL1Q9H079 304 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 RRAGCQ9HB90 399 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 CPSF3Q9UKF6 684 aaKnown RBP12.8□□□□□ -0.36
SND1-210ENST00000483503 TTC7AQ9ULT0 858 aaPredicted RBP12.8□□□□□ -0.36
SND1-210ENST00000483503 L1RE1Q9UN81 338 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 ZNF236Q9UL36 1845 aa12.8□□□□□ -0.36
SND1-210ENST00000483503 MAP2K7O14733 419 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 CEP104O60308 925 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 VNN1O95497 513 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 SNAI1O95863 264 aaPredicted RBP12.79□□□□□ -0.36
SND1-210ENST00000483503 MMEP08473 750 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 HOXC6P09630 235 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 MCF2P10911 925 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 HOXD8P13378 290 aaPredicted RBP12.79□□□□□ -0.36
SND1-210ENST00000483503 CLCN3P51790 818 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 NOP14P78316 857 aaKnown RBP12.79□□□□□ -0.36
SND1-210ENST00000483503 CBX1P83916 185 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 MKRN3Q13064 507 aaKnown RBP12.79□□□□□ -0.36
SND1-210ENST00000483503 TRPC3Q13507 836 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 ACVR2BQ13705 512 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 DGKDQ16760 1214 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 SGSM1Q2NKQ1 1148 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 ZNF568Q3ZCX4 644 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 CCNI2Q6ZMN8 369 aaPredicted RBP12.79□□□□□ -0.36
SND1-210ENST00000483503 ZBTB33Q86T24 672 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 IFT20Q8IY31 132 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 RASGEF1CQ8N431 466 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 OR6J1Q8NGC5 347 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 ARHGEF26Q96DR7 871 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 FAXDC2Q96IV6 333 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 ANKRD36BP1Q96IX9 119 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 NLRP4Q96MN2 994 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 PCDHB18PQ96TA0 734 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 ARID3AQ99856 593 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 PI4K2AQ9BTU6 479 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 CARD9Q9H257 536 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 RNPEPQ9H4A4 650 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 VIPAS39Q9H9C1 493 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 RBM12Q9NTZ6 932 aaKnown RBP12.79□□□□□ -0.36
SND1-210ENST00000483503 TAS2R14Q9NYV8 317 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 STIM2Q9P246 746 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 PACSIN2Q9UNF0 486 aaPredicted RBP12.79□□□□□ -0.36
SND1-210ENST00000483503 CNTN6Q9UQ52 1028 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 PCDHB4Q9Y5E5 795 aa12.79□□□□□ -0.36
SND1-210ENST00000483503 H3BRB1 525 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 FAM189A1O60320 539 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 B4GALT4O60513 344 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 CLSTN1O94985 981 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 EDN1P05305 212 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 TMEM191BP0C7N4 346 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 HSPA6P17066 643 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 ADCYAP1R1P41586 468 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 DNA2P51530 1060 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 FAM193AP78312 1265 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 MBTD1Q05BQ5 628 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 LIN9Q5TKA1 542 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 LMBRD2Q68DH5 695 aaPredicted RBP12.78□□□□□ -0.36
SND1-210ENST00000483503 LINC01465Q8N7H1 131 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 TRAPPC12Q8WVT3 735 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.78□□□□□ -0.36
SND1-210ENST00000483503 DDX1Q92499 740 aaKnown RBP12.78□□□□□ -0.36
SND1-210ENST00000483503 ZNF653Q96CK0 615 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 MS4A14Q96JA4 679 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 LRRC1Q9BTT6 524 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 WNT8AQ9H1J5 351 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 TUT1Q9H6E5 874 aaKnown RBP12.78□□□□□ -0.36
SND1-210ENST00000483503 RPF1Q9H9Y2 349 aaKnown RBP12.78□□□□□ -0.36
SND1-210ENST00000483503 PTPRHQ9HD43 1115 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 OSGEPQ9NPF4 335 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 AVENQ9NQS1 362 aaPredicted RBP12.78□□□□□ -0.36
SND1-210ENST00000483503 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.78□□□□□ -0.36
SND1-210ENST00000483503 AKT3Q9Y243 479 aa12.78□□□□□ -0.36
SND1-210ENST00000483503 GOLGA6L10A0A0M3HER8 536 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 ABLIM1O14639 778 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 ASS1P00966 412 aaKnown RBP12.77□□□□□ -0.37
SND1-210ENST00000483503 MMP3P08254 477 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 HUNKP57058 714 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 INHBEP58166 350 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 IGBP1P78318 339 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 GABPB1Q06547 395 aaPredicted RBP12.77□□□□□ -0.37
SND1-210ENST00000483503 PPFIA1Q13136 1202 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 MAP2K5Q13163 448 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 ZBTB41Q5SVQ8 909 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms