RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 NPHP3-ACAD11A0A0J9YXS1 232 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 C7orf72A4D263 438 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 RFPL3O75679 317 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 PPM1BO75688 479 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 ZRANB2O95218 330 aaKnown RBP eCLIP7.67□□□□□ -1.18
CLK1-212ENST00000482590 TRIM27P14373 513 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 PAMP19021 973 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 GIPRP48546 466 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 KIF22Q14807 665 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 SLC9C1Q4G0N8 1177 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 NECAB2Q7Z6G3 386 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 FAM83AQ86UY5 434 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 UBR7Q8N806 425 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 VGLL2Q8N8G2 317 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 KLHDC4Q8TBB5 520 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 WDR66Q8TBY9 1149 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 USP33Q8TEY7 942 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 BRI3BPQ8WY22 251 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 PTPN18Q99952 460 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 SYT3Q9BQG1 590 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 ZNF341Q9BYN7 854 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 NGRNQ9NPE2 291 aaKnown RBP7.67□□□□□ -1.18
CLK1-212ENST00000482590 SMC4Q9NTJ3 1288 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.67□□□□□ -1.18
CLK1-212ENST00000482590 SLC12A7Q9Y666 1083 aa7.67□□□□□ -1.18
CLK1-212ENST00000482590 MKI67P46013 3256 aaKnown RBP7.67□□□□□ -1.18
CLK1-212ENST00000482590 DOCK3Q8IZD9 2030 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 GSG1L2A8MUP6 293 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 EYA2O00167 538 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 SLC26A4O43511 780 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 NTRK1P04629 796 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 UBTFL1P0CB47 393 aaPredicted RBP7.66□□□□□ -1.18
CLK1-212ENST00000482590 CYP2C8P10632 490 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 CETPP11597 493 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 AMPD2Q01433 879 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 SLC7A5Q01650 507 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 SSRP1Q08945 709 aaKnown RBP7.66□□□□□ -1.18
CLK1-212ENST00000482590 PPIL2Q13356 520 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 ALDH1L2Q3SY69 923 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 KRTAP5-3Q6L8H2 238 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 SPATC1Q76KD6 591 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 ERO1BQ86YB8 467 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 PASD1Q8IV76 773 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 CPXCR1Q8N123 301 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 FAM43AQ8N2R8 423 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 ST13P5Q8NFI4 369 aaPredicted RBP7.66□□□□□ -1.18
CLK1-212ENST00000482590 OR6P1Q8NGX9 317 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 SNRNP27Q8WVK2 155 aaKnown RBP7.66□□□□□ -1.18
CLK1-212ENST00000482590 SSH1Q8WYL5 1049 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 KLHL6Q8WZ60 621 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 LPIN2Q92539 896 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 RCC1LQ96I51 464 aaKnown RBP7.66□□□□□ -1.18
CLK1-212ENST00000482590 CRBNQ96SW2 442 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 ZCCHC17Q9NP64 241 aaKnown RBP7.66□□□□□ -1.18
CLK1-212ENST00000482590 LUZP4Q9P127 313 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 PFDN2Q9UHV9 154 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 GTF2A1LQ9UNN4 478 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 DAAM1Q9Y4D1 1078 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 MYH1P12882 1939 aa7.66□□□□□ -1.18
CLK1-212ENST00000482590 A0A1W2PQH9 124 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 PRRT4C9JH25 899 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 MATN3O15232 486 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 RFPL1O75677 317 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 EYA4O95677 639 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 FUCA1P04066 466 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 FGFR2P21802 821 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 PABPC4Q13310 644 aaKnown RBP eCLIP7.65□□□□□ -1.18
CLK1-212ENST00000482590 GRB10Q13322 594 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 SNAPC2Q13487 334 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 ATP2B3Q16720 1220 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 SLC4A8Q2Y0W8 1093 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 FKBP1CQ5VVH2 108 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 ENAHQ8N8S7 591 aaPredicted RBP7.65□□□□□ -1.18
CLK1-212ENST00000482590 CCDC89Q8N998 374 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 ZKSCAN4Q969J2 545 aaPredicted RBP7.65□□□□□ -1.18
CLK1-212ENST00000482590 C11orf84Q9BUA3 381 aaPredicted RBP7.65□□□□□ -1.18
CLK1-212ENST00000482590 USP44Q9H0E7 712 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 SIL1Q9H173 461 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 RSPH9Q9H1X1 276 aaPredicted RBP7.65□□□□□ -1.18
CLK1-212ENST00000482590 USP25Q9UHP3 1055 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 NOB1Q9ULX3 412 aaKnown RBP7.65□□□□□ -1.18
CLK1-212ENST00000482590 HDAC5Q9UQL6 1122 aa7.65□□□□□ -1.18
CLK1-212ENST00000482590 ALPK3Q96L96 1907 aa7.64□□□□□ -1.19
CLK1-212ENST00000482590 SIPA1L1O43166 1804 aa7.64□□□□□ -1.19
CLK1-212ENST00000482590 TRBV23OR9-2A0A075B6M9 112 aa7.64□□□□□ -1.19
CLK1-212ENST00000482590 AKAP8O43823 692 aaKnown RBP7.64□□□□□ -1.19
CLK1-212ENST00000482590 NPHS1O60500 1241 aa7.64□□□□□ -1.19
CLK1-212ENST00000482590 TLR2O60603 784 aa7.64□□□□□ -1.19
CLK1-212ENST00000482590 RNASEH2AO75792 299 aaKnown RBP7.64□□□□□ -1.19
CLK1-212ENST00000482590 GJB6O95452 261 aa7.64□□□□□ -1.19
CLK1-212ENST00000482590 PLATP00750 562 aa7.64□□□□□ -1.19
CLK1-212ENST00000482590 CPEP16870 476 aa7.64□□□□□ -1.19
CLK1-212ENST00000482590 PRDX5P30044 214 aa7.64□□□□□ -1.19
CLK1-212ENST00000482590 THBS2P35442 1172 aa7.64□□□□□ -1.19
CLK1-212ENST00000482590 RFX5P48382 616 aaPredicted RBP7.64□□□□□ -1.19
CLK1-212ENST00000482590 ZXDAP98168 799 aa7.64□□□□□ -1.19
CLK1-212ENST00000482590 PPATQ06203 517 aa7.64□□□□□ -1.19
CLK1-212ENST00000482590 MBLAC2Q68D91 279 aa7.64□□□□□ -1.19
CLK1-212ENST00000482590 APOBEC3HQ6NTF7 200 aaKnown RBP7.64□□□□□ -1.19
CLK1-212ENST00000482590 MIGA2Q7L4E1 593 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms