RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 MRPL58Q14197 206 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 SF3A1Q15459 793 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 TMEM132AQ24JP5 1023 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 ZNF568Q3ZCX4 644 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 IER5LQ5T953 404 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 SPATA31D4Q6ZUB0 917 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 CCDC149Q6ZUS6 474 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 C3orf58Q8NDZ4 430 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 ACSF2Q96CM8 615 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 SNX27Q96L92 541 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 ACAP3Q96P50 834 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 FIZ1Q96SL8 496 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 PLIN2Q99541 437 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 HAPLN2Q9GZV7 340 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 PLEKHA5Q9HAU0 1116 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 TSHZ2Q9NRE2 1034 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 TOPORSQ9NS56 1045 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 SLC38A7Q9NVC3 462 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 IGSF9Q9P2J2 1179 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 LARSQ9P2J5 1176 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 MTRRQ9UBK8 725 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 FBXW11Q9UKB1 542 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 PLXNA3P51805 1871 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 DOCK8Q8NF50 2099 aa10.65□□□□□ -0.7
TMEM39A-207ENST00000482162 C2orf16Q68DN1 1984 aa10.65□□□□□ -0.71
TMEM39A-207ENST00000482162 VWA8A3KMH1 1905 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 NPHP3-ACAD11A0A0J9YXS1 232 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 TTC26A0AVF1 554 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 H0YCG3 227 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 ASGR2P07307 311 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 HNRNPA1P09651 372 aaKnown RBP eCLIP10.64□□□□□ -0.713e-6■■■■□ 19.4
TMEM39A-207ENST00000482162 SYT1P21579 422 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 AVPR2P30518 371 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 DDIT3P35638 169 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 NUBP1P53384 320 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 RESTQ13127 1097 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 PSMD5Q16401 504 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 UVSSAQ2YD98 709 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 GLRA4Q5JXX5 417 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 SLC8B1Q6J4K2 584 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 RSPO2Q6UXX9 243 aaPredicted RBP10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 HAUS6Q7Z4H7 955 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 ALYREFQ86V81 257 aaKnown RBP10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 HASPINQ8TF76 798 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 SMG7Q92540 1137 aaKnown RBP10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 RAD54LQ92698 747 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 NXPE3Q969Y0 559 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 PRRX2Q99811 253 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 REEP2Q9BRK0 252 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 SMOC2Q9H3U7 446 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 ST6GALNAC4Q9H4F1 302 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 KCNK12Q9HB15 430 aa10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 SRPRBQ9Y5M8 271 aaKnown RBP10.64□□□□□ -0.71
TMEM39A-207ENST00000482162 DOCK6Q96HP0 2047 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 CLUHO75153 1309 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 A0A0B4J269 797 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 ANHXE9PGG2 379 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 SYN3O14994 580 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 CLDN3O15551 220 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 TRAPPC3O43617 180 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 ABLIM3O94929 683 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 CLTAP09496 248 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 PLCG1P19174 1290 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 YARSP54577 528 aaKnown RBP10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 GTF2BQ00403 316 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 NHLH1Q02575 133 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 RAD51AP2Q09MP3 1159 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 STRN3Q13033 797 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 TDGQ13569 410 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 ZRSR1Q15695 479 aaKnown RBP10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 ANKS3Q6ZW76 656 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 USP49Q70CQ1 688 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 ZBTB33Q86T24 672 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 STAMQ92783 540 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 C18orf25Q96B23 403 aaPredicted RBP10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 CALML4Q96GE6 196 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 CDK5RAP3Q96JB5 506 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 MYADMQ96S97 322 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 TSPAN18Q96SJ8 248 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 TCHPQ9BT92 498 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 STRA6Q9BX79 667 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 GOLGA2P5Q9HBQ8 144 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 FBXO2Q9UK22 296 aaPredicted RBP10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 TBX20Q9UMR3 447 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 MTMR6Q9Y217 621 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 CLIC4Q9Y696 253 aa10.63□□□□□ -0.71
TMEM39A-207ENST00000482162 PODXLO00592 558 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 PDGFBP01127 241 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 LAMP2P13473 410 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 CYP3A5P20815 502 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 TKTP29401 623 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 LRPAP1P30533 357 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 OR1D2P34982 312 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 CLCN5P51795 746 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 VCPP55072 806 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 OSTNP61366 133 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 POU5F1Q01860 360 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 TCF15Q12870 199 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms