RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TRIP11Q15643 1979 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 KLHL33A6NCF5 533 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 GOLGA6L19H0YKK7 550 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 MAPK13O15264 365 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 SLC16A3O15427 465 aaKnown RBP12.56□□□□□ -0.4
HPS4-212ENST00000481910 GNA14O95837 355 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 GTF2A1P52655 376 aaPredicted RBP12.56□□□□□ -0.4
HPS4-212ENST00000481910 MLLT1Q03111 559 aaPredicted RBP12.56□□□□□ -0.4
HPS4-212ENST00000481910 GABPB1Q06547 395 aaPredicted RBP12.56□□□□□ -0.4
HPS4-212ENST00000481910 ZRSR2Q15696 482 aaKnown RBP12.56□□□□□ -0.4
HPS4-212ENST00000481910 SLC10A6Q3KNW5 377 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 GAS2L3Q86XJ1 694 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 FAM114A1Q8IWE2 563 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 HERVK_113Q902F9 699 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 TOP1MTQ969P6 601 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 MFSD14AQ96MC6 490 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 MTIF3Q9H2K0 278 aaKnown RBP12.56□□□□□ -0.4
HPS4-212ENST00000481910 RSAD1Q9HA92 442 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 PLEKHA5Q9HAU0 1116 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 CXXC1Q9P0U4 656 aaPredicted RBP12.56□□□□□ -0.4
HPS4-212ENST00000481910 MAGEC2Q9UBF1 373 aaPredicted RBP12.56□□□□□ -0.4
HPS4-212ENST00000481910 GIT1Q9Y2X7 761 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 FGFR1P11362 822 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 KRT13P13646 458 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 MLH1P40692 756 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 DEFB103AP81534 67 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 POU5F1Q01860 360 aaKnown RBP12.55□□□□□ -0.4
HPS4-212ENST00000481910 PPP2R3AQ06190 1150 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 CYP24A1Q07973 514 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 INTS8Q75QN2 995 aaKnown RBP12.55□□□□□ -0.4
HPS4-212ENST00000481910 FRMD5Q7Z6J6 570 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 IRF2BP1Q8IU81 584 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 NPAS4Q8IUM7 802 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 BRSK2Q8IWQ3 736 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 CRIPAKQ8N1N5 446 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 CCDC127Q96BQ5 260 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 ZFP42Q96MM3 310 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 GAD1Q99259 594 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 UBE2OQ9C0C9 1292 aaKnown RBP12.55□□□□□ -0.4
HPS4-212ENST00000481910 METTL14Q9HCE5 456 aaKnown RBP12.55□□□□□ -0.4
HPS4-212ENST00000481910 PDE11AQ9HCR9 933 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 ARMCX3Q9UH62 379 aaPredicted RBP12.55□□□□□ -0.4
HPS4-212ENST00000481910 CEP290O15078 2479 aa12.55□□□□□ -0.4
HPS4-212ENST00000481910 TTC26A0AVF1 554 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 LACTBL1A8MY62 500 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 MEFVO15553 781 aaPredicted RBP12.54□□□□□ -0.4
HPS4-212ENST00000481910 IL18RAPO95256 599 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 VAMP7P51809 220 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 TPM4P67936 248 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 SPAG1Q07617 926 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 FAM117BQ6P1L5 589 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 GLB1LQ6UWU2 654 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 ALKAL1Q6UXT8 129 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 TMCO2Q7Z6W1 182 aaPredicted RBP12.54□□□□□ -0.4
HPS4-212ENST00000481910 USP37Q86T82 979 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 CD302Q8IX05 232 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 ABI1Q8IZP0 508 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 SNX27Q96L92 541 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 CNOT6LQ96LI5 555 aaKnown RBP12.54□□□□□ -0.4
HPS4-212ENST00000481910 FNBP1Q96RU3 617 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 RPS6KC1Q96S38 1066 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 CXCL16Q9H2A7 254 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 ASB7Q9H672 318 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 RNF19AQ9NV58 838 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 SLC4A7Q9Y6M7 1214 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 ARL5CA6NH57 179 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 KCNJ18B7U540 433 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 HOXA2O43364 376 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 DLATP10515 647 aaKnown RBP12.54□□□□□ -0.4
HPS4-212ENST00000481910 BFSP1Q12934 665 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 KCNJ12Q14500 433 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 PSMD6Q15008 389 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 SURF1Q15526 300 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 C9orf50Q5SZB4 431 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 CDKAL1Q5VV42 579 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 TCERG1LQ5VWI1 586 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 HELQQ8TDG4 1101 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 PARD3BQ8TEW8 1205 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 POP1Q99575 1024 aaKnown RBP12.54□□□□□ -0.4
HPS4-212ENST00000481910 GDF15Q99988 308 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 HSD3B7Q9H2F3 369 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 INPP5FQ9Y2H2 1132 aa12.54□□□□□ -0.4
HPS4-212ENST00000481910 PDE4DIPQ5VU43 2346 aa12.53□□□□□ -0.4
HPS4-212ENST00000481910 ANK1P16157 1881 aa12.53□□□□□ -0.4
HPS4-212ENST00000481910 SMIM28A0A1B0GU29 152 aa12.53□□□□□ -0.4
HPS4-212ENST00000481910 TNNI1P19237 187 aa12.53□□□□□ -0.4
HPS4-212ENST00000481910 MTIF2P46199 727 aaKnown RBP12.53□□□□□ -0.4
HPS4-212ENST00000481910 AFF1P51825 1210 aaKnown RBP12.53□□□□□ -0.4
HPS4-212ENST00000481910 MARSP56192 900 aaKnown RBP12.53□□□□□ -0.4
HPS4-212ENST00000481910 WNT7BP56706 349 aa12.53□□□□□ -0.4
HPS4-212ENST00000481910 DLG4P78352 724 aa12.53□□□□□ -0.4
HPS4-212ENST00000481910 SHHQ15465 462 aa12.53□□□□□ -0.4
HPS4-212ENST00000481910 TCP11X2Q5H9J9 407 aa12.53□□□□□ -0.4
HPS4-212ENST00000481910 DCAF17Q5H9S7 520 aaPredicted RBP12.53□□□□□ -0.4
HPS4-212ENST00000481910 GLRA4Q5JXX5 417 aa12.53□□□□□ -0.4
HPS4-212ENST00000481910 CLLU1OSQ5K130 101 aa12.53□□□□□ -0.4
HPS4-212ENST00000481910 JADE1Q6IE81 842 aa12.53□□□□□ -0.4
HPS4-212ENST00000481910 GSTCDQ8NEC7 633 aa12.53□□□□□ -0.4
HPS4-212ENST00000481910 TMC2Q8TDI7 906 aa12.53□□□□□ -0.4
HPS4-212ENST00000481910 RNPC3Q96LT9 517 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms