RNA–Protein interactions for RNA: ENST00000481077.6

CNKSR1-206, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 865 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-206ENST00000481077 TULP1O00294 542 aaPredicted RBP16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 PDXKO00764 312 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 XPOTO43592 962 aaKnown RBP16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 IL18RAPO95256 599 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 DNAJB1P25685 340 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 SPAG1Q07617 926 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 BMS1Q14692 1282 aaKnown RBP16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 DDX53Q86TM3 631 aaKnown RBP16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 C12orf56Q8IXR9 622 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 SMYD4Q8IYR2 804 aaPredicted RBP16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 XXYLT1Q8NBI6 393 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 ZSWIM2Q8NEG5 633 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 MICAL1Q8TDZ2 1067 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 BCL7CQ8WUZ0 217 aaPredicted RBP16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 RABGGTAQ92696 567 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 C18orf25Q96B23 403 aaPredicted RBP16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 DDX27Q96GQ7 796 aaKnown RBP16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 PAAF1Q9BRP4 392 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 ASB7Q9H672 318 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 TLR9Q9NR96 1032 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 MARCH5Q9NX47 278 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 CACNG4Q9UBN1 327 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 MAN1B1Q9UKM7 699 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 DERAQ9Y315 318 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 EYSQ5T1H1 3165 aa16.94■□□□□ 0.3
CNKSR1-206ENST00000481077 ZNF233A6NK53 670 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 CALUO43852 315 aaPredicted RBP16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 TADA2AO75478 443 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 RPL9P32969 192 aaKnown RBP16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 CLCNKBP51801 687 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 CAMK1Q14012 370 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 TMEM132DQ14C87 1099 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 UPP1Q16831 310 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 TIGD5Q53EQ6 642 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 JADE1Q6IE81 842 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 PDE12Q6L8Q7 609 aaKnown RBP16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 BRSK2Q8IWQ3 736 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 VPS52Q8N1B4 723 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 TCF25Q9BQ70 676 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 CLSTN2Q9H4D0 955 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 GOLGA2P5Q9HBQ8 144 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 ENTPD7Q9NQZ7 604 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 ADAM28Q9UKQ2 775 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 UBQLN1Q9UMX0 589 aaKnown RBP16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 MYO9BQ13459 2157 aa16.93■□□□□ 0.3
CNKSR1-206ENST00000481077 TRIP11Q15643 1979 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 F8W810 466 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 EXOC3O60645 756 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 NFICP08651 508 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 CYP3A5P20815 502 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 PRCPP42785 496 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 SOX4Q06945 474 aaPredicted RBP16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 STIM1Q13586 685 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 ZBTB6Q15916 424 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 SNRNP35Q16560 246 aaKnown RBP16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 COBLL1Q53SF7 1204 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 ISM2Q6H9L7 571 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 DCLRE1AQ6PJP8 1040 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 TMC7Q7Z402 723 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 CBWD2Q8IUF1 395 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 BEST2Q8NFU1 509 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 MAFAQ8NHW3 353 aaPredicted RBP16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 TMEM174Q8WUU8 243 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 FBXL18Q96ME1 805 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 NUP62CLQ9H1M0 184 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 NSUN3Q9H649 340 aaKnown RBP16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 NGRNQ9NPE2 291 aaKnown RBP16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 KIAA1468Q9P260 1216 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 TUBGCP4Q9UGJ1 667 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 TRAF3IP3Q9Y228 551 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 C2CD2Q9Y426 696 aa16.92■□□□□ 0.3
CNKSR1-206ENST00000481077 BIN1O00499 593 aa16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 PODXLO00592 558 aa16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 B3GAT3O94766 335 aa16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 KIF4AO95239 1232 aa16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 NR3C1P04150 777 aa16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 IRS1P35568 1242 aa16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 ERVFC1P60507 584 aa16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 CCDC85BQ15834 202 aaPredicted RBP16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 NT5DC4Q86YG4 428 aa16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 SLC9A9Q8IVB4 645 aa16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 RDH13Q8NBN7 331 aa16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 GPT2Q8TD30 523 aa16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 HASPINQ8TF76 798 aa16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 PPM1EQ8WY54 764 aa16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 PPP2R3CQ969Q6 453 aa16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 SF3B1O75533 1304 aaKnown RBP eCLIP16.91■□□□□ 0.3
CNKSR1-206ENST00000481077 PDCD11Q14690 1871 aaKnown RBP16.9■□□□□ 0.3
CNKSR1-206ENST00000481077 TMEM189-UBE2V1I3L0A0 370 aa16.9■□□□□ 0.3
CNKSR1-206ENST00000481077 MBD3O95983 291 aa16.9■□□□□ 0.3
CNKSR1-206ENST00000481077 CA8P35219 290 aa16.9■□□□□ 0.3
CNKSR1-206ENST00000481077 PPP1R2P41236 205 aa16.9■□□□□ 0.3
CNKSR1-206ENST00000481077 ELAVL2Q12926 359 aaKnown RBP16.9■□□□□ 0.3
CNKSR1-206ENST00000481077 MORC3Q14149 939 aa16.9■□□□□ 0.3
CNKSR1-206ENST00000481077 MYBPC2Q14324 1141 aa16.9■□□□□ 0.3
CNKSR1-206ENST00000481077 SMC1AQ14683 1233 aaKnown RBP16.9■□□□□ 0.3
CNKSR1-206ENST00000481077 SURF1Q15526 300 aa16.9■□□□□ 0.3
CNKSR1-206ENST00000481077 SPATA1Q5VX52 437 aa16.9■□□□□ 0.3
CNKSR1-206ENST00000481077 PLPP4Q5VZY2 271 aa16.9■□□□□ 0.3
CNKSR1-206ENST00000481077 FUT10Q6P4F1 479 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms