RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 SHKBP1Q8TBC3 707 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 STK35Q8TDR2 534 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 GDPD5Q8WTR4 605 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 DNAJB3Q8WWF6 145 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 ARNTL2Q8WYA1 636 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 SEPT1Q8WYJ6 367 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 SLC26A6Q9BXS9 759 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 MTIF3Q9H2K0 278 aaKnown RBP6.3□□□□□ -1.4
LINC02040-201ENST00000481004 SEMA6CQ9H3T2 930 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 GSX1Q9H4S2 264 aaPredicted RBP6.3□□□□□ -1.4
LINC02040-201ENST00000481004 ACSS3Q9H6R3 686 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 AGO3Q9H9G7 860 aaKnown RBP6.3□□□□□ -1.4
LINC02040-201ENST00000481004 RC3H2Q9HBD1 1191 aaKnown RBP6.3□□□□□ -1.4
LINC02040-201ENST00000481004 SLC9A2Q9UBY0 812 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 CYP8B1Q9UNU6 501 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 MTCH2Q9Y6C9 303 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 TRIOO75962 3097 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 PLXNA4Q9HCM2 1894 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 TTC3P53804 2025 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 ARID2Q68CP9 1835 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 NFASCO94856 1347 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 NRCAMQ92823 1304 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 WDR64B1ANS9 1081 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 PAGE1O75459 146 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 REC8O95072 547 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 NFICP08651 508 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 CYP3A4P08684 503 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 CELA3AP09093 270 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 GHRP10912 638 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 POU3F3P20264 500 aaPredicted RBP6.29□□□□□ -1.4
LINC02040-201ENST00000481004 BMP6P22004 513 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 KCNJ6P48051 423 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 DAB2P98082 770 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 SCRN1Q12765 414 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 STK3Q13188 491 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 UGCGQ16739 394 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 FNDC1Q4ZHG4 1894 aaPredicted RBP6.29□□□□□ -1.4
LINC02040-201ENST00000481004 EARS2Q5JPH6 523 aaKnown RBP6.29□□□□□ -1.4
LINC02040-201ENST00000481004 FBXO47Q5MNV8 452 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 ARTNQ5T4W7 220 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 NIPA1Q7RTP0 329 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 RPAINQ86UA6 219 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 PLA2G4DQ86XP0 818 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 ZDHHC13Q8IUH4 622 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 GIMAP8Q8ND71 665 aaPredicted RBP6.29□□□□□ -1.4
LINC02040-201ENST00000481004 GPBAR1Q8TDU6 330 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 TMEM40Q8WWA1 233 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 TBC1D32Q96NH3 1257 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 FANCD2OSQ96PS1 177 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 C17orf80Q9BSJ5 609 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 OSBPL1AQ9BXW6 950 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 RNF26Q9BY78 433 aaPredicted RBP6.29□□□□□ -1.4
LINC02040-201ENST00000481004 TM6SF1Q9BZW5 370 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 FAM49AQ9H0Q0 323 aaPredicted RBP6.29□□□□□ -1.4
LINC02040-201ENST00000481004 TMX1Q9H3N1 280 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 ZFP64Q9NPA5 681 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 ERAP1Q9NZ08 941 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 TUBE1Q9UJT0 475 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 ZNF215Q9UL58 517 aaPredicted RBP6.29□□□□□ -1.4
LINC02040-201ENST00000481004 MTUS1Q9ULD2 1270 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 TPCN1Q9ULQ1 816 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 CDY2AQ9Y6F7 541 aa6.29□□□□□ -1.4
LINC02040-201ENST00000481004 MYO7AQ13402 2215 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 TMEM150BA6NC51 233 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 hCG_1984214I3L0E3 225 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 IPO5O00410 1097 aaKnown RBP6.28□□□□□ -1.4
LINC02040-201ENST00000481004 MSH4O15457 936 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 MAFGO15525 162 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 MGEA5O60502 916 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 RNGTTO60942 597 aaKnown RBP6.28□□□□□ -1.4
LINC02040-201ENST00000481004 CAND2O75155 1236 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 STBD1O95210 358 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 TDP2O95551 362 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 FOSP01100 380 aaPredicted RBP6.28□□□□□ -1.4
LINC02040-201ENST00000481004 TGFB1P01137 390 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 FDPSP14324 419 aaKnown RBP6.28□□□□□ -1.4
LINC02040-201ENST00000481004 CD52P31358 61 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 CIITAP33076 1130 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 GATMP50440 423 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 KCNQ1P51787 676 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 ERVK-21P61565 698 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 MRPS6P82932 125 aaKnown RBP6.28□□□□□ -1.4
LINC02040-201ENST00000481004 PRR16Q569H4 304 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 MTHFD1LQ6UB35 978 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 B3GNT9Q6UX72 402 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 ZAR1Q86SH2 424 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 MYOCDQ8IZQ8 938 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 REXO1Q8N1G1 1221 aaKnown RBP6.28□□□□□ -1.4
LINC02040-201ENST00000481004 ZNF713Q8N859 430 aaPredicted RBP6.28□□□□□ -1.4
LINC02040-201ENST00000481004 GLG1Q92896 1179 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 TOP1MTQ969P6 601 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 IL17RAQ96F46 866 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 CDHR1Q96JP9 859 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 RAD9AQ99638 391 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 IFIH1Q9BYX4 1025 aaKnown RBP6.28□□□□□ -1.4
LINC02040-201ENST00000481004 SMARCAD1Q9H4L7 1026 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 KCNJ14Q9UNX9 436 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 PCDHGC5Q9Y5F6 944 aa6.28□□□□□ -1.4
LINC02040-201ENST00000481004 IGSF9BQ9UPX0 1349 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms