RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 DCLRE1AQ6PJP8 1040 aa21.98■■□□□ 1.11
VPS36-204ENST00000480923 CEP57Q86XR8 500 aa21.98■■□□□ 1.11
VPS36-204ENST00000480923 HVCN1Q96D96 273 aa21.98■■□□□ 1.11
VPS36-204ENST00000480923 POP1Q99575 1024 aaKnown RBP21.98■■□□□ 1.11
VPS36-204ENST00000480923 RXFP1Q9HBX9 757 aa21.98■■□□□ 1.11
VPS36-204ENST00000480923 TTC28Q96AY4 2481 aa21.98■■□□□ 1.11
VPS36-204ENST00000480923 ANKRD63C9JTQ0 380 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 OGTO15294 1046 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 POLR2DO15514 142 aaKnown RBP21.97■■□□□ 1.11
VPS36-204ENST00000480923 MEFVO15553 781 aaPredicted RBP21.97■■□□□ 1.11
VPS36-204ENST00000480923 GCNT3O95395 438 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 TNFSF9P41273 254 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 KRT85P78386 507 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 AMPD3Q01432 767 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 UPP1Q16831 310 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 RARS2Q5T160 578 aaKnown RBP21.97■■□□□ 1.11
VPS36-204ENST00000480923 RESP18Q5W5W9 173 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 CES5AQ6NT32 575 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 SLC39A4Q6P5W5 647 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 CCDC65Q8IXS2 484 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 C12orf76Q8N812 135 aaPredicted RBP21.97■■□□□ 1.11
VPS36-204ENST00000480923 SUSD6Q92537 303 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 C18orf25Q96B23 403 aaPredicted RBP21.97■■□□□ 1.11
VPS36-204ENST00000480923 DDX27Q96GQ7 796 aaKnown RBP21.97■■□□□ 1.11
VPS36-204ENST00000480923 FBXL18Q96ME1 805 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 TTPALQ9BTX7 342 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 PLEKHA5Q9HAU0 1116 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.97■■□□□ 1.11
VPS36-204ENST00000480923 KBTBD4Q9NVX7 518 aa21.97■■□□□ 1.11
VPS36-204ENST00000480923 A0A0B4J269 797 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 FRMD3A2A2Y4 597 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 TMEM189-UBE2V1I3L0A0 370 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 PODXLO00592 558 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 CREMQ03060 361 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 ITIH3Q06033 890 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 PPP2R3AQ06190 1150 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 CBX2Q14781 532 aaPredicted RBP21.96■■□□□ 1.11
VPS36-204ENST00000480923 RTP2Q5QGT7 225 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 ZBTB41Q5SVQ8 909 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 PRSS55Q6UWB4 352 aaPredicted RBP21.96■■□□□ 1.11
VPS36-204ENST00000480923 GLYCTKQ8IVS8 523 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 GPR65Q8IYL9 337 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 CHAMP1Q96JM3 812 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 SPATA32Q96LK8 384 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 ACCSQ96QU6 501 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 ADAM7Q9H2U9 754 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 RPF1Q9H9Y2 349 aaKnown RBP21.96■■□□□ 1.11
VPS36-204ENST00000480923 OLFML3Q9NRN5 406 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 EXOC7Q9UPT5 735 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 PCDHB13Q9Y5F0 798 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 ATP6V1DQ9Y5K8 247 aa21.96■■□□□ 1.11
VPS36-204ENST00000480923 TISP43B9A030 160 aa21.95■■□□□ 1.1
VPS36-204ENST00000480923 PPP1R37O75864 691 aa21.95■■□□□ 1.1
VPS36-204ENST00000480923 GLUD1P00367 558 aa21.95■■□□□ 1.1
VPS36-204ENST00000480923 MYBP10242 640 aa21.95■■□□□ 1.1
VPS36-204ENST00000480923 RPL17P18621 184 aaKnown RBP21.95■■□□□ 1.1
VPS36-204ENST00000480923 IGFBP6P24592 240 aaPredicted RBP21.95■■□□□ 1.1
VPS36-204ENST00000480923 ASIC1P78348 528 aa21.95■■□□□ 1.1
VPS36-204ENST00000480923 L1TD1Q5T7N2 865 aaKnown RBP21.95■■□□□ 1.1
VPS36-204ENST00000480923 ADALQ6DHV7 355 aa21.95■■□□□ 1.1
VPS36-204ENST00000480923 SLFN12LQ6IEE8 588 aa21.95■■□□□ 1.1
VPS36-204ENST00000480923 C3orf58Q8NDZ4 430 aa21.95■■□□□ 1.1
VPS36-204ENST00000480923 LEO1Q8WVC0 666 aaPredicted RBP21.95■■□□□ 1.1
VPS36-204ENST00000480923 FAM212AQ96EL1 285 aa21.95■■□□□ 1.1
VPS36-204ENST00000480923 KIF12Q96FN5 646 aa21.95■■□□□ 1.1
VPS36-204ENST00000480923 PHF7Q9BWX1 381 aaPredicted RBP21.95■■□□□ 1.1
VPS36-204ENST00000480923 STRA6Q9BX79 667 aa21.95■■□□□ 1.1
VPS36-204ENST00000480923 TRIM9Q9C026 710 aa21.95■■□□□ 1.1
VPS36-204ENST00000480923 MAGEF1Q9HAY2 307 aa21.95■■□□□ 1.1
VPS36-204ENST00000480923 FNIP2Q9P278 1114 aa21.95■■□□□ 1.1
VPS36-204ENST00000480923 TTC26A0AVF1 554 aa21.94■■□□□ 1.1
VPS36-204ENST00000480923 C19orf67A6NJJ6 358 aa21.94■■□□□ 1.1
VPS36-204ENST00000480923 TRAPPC3O43617 180 aa21.94■■□□□ 1.1
VPS36-204ENST00000480923 FAM189A1O60320 539 aa21.94■■□□□ 1.1
VPS36-204ENST00000480923 RPL9P32969 192 aaKnown RBP21.94■■□□□ 1.1
VPS36-204ENST00000480923 BRCC3P46736 316 aa21.94■■□□□ 1.1
VPS36-204ENST00000480923 CASP5P51878 434 aa21.94■■□□□ 1.1
VPS36-204ENST00000480923 SPAG1Q07617 926 aa21.94■■□□□ 1.1
VPS36-204ENST00000480923 ENOX2Q16206 610 aaKnown RBP21.94■■□□□ 1.1
VPS36-204ENST00000480923 PSMD5Q16401 504 aa21.94■■□□□ 1.1
VPS36-204ENST00000480923 KANK3Q6NY19 840 aa21.94■■□□□ 1.1
VPS36-204ENST00000480923 ELMSAN1Q6PJG2 1045 aa21.94■■□□□ 1.1
VPS36-204ENST00000480923 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.94■■□□□ 1.1
VPS36-204ENST00000480923 PALB2Q86YC2 1186 aa21.94■■□□□ 1.1
VPS36-204ENST00000480923 IKZF4Q9H2S9 585 aa21.94■■□□□ 1.1
VPS36-204ENST00000480923 SFXN1Q9H9B4 322 aa21.94■■□□□ 1.1
VPS36-204ENST00000480923 MAN1C1Q9NR34 630 aa21.94■■□□□ 1.1
VPS36-204ENST00000480923 CDH22Q9UJ99 828 aa21.94■■□□□ 1.1
VPS36-204ENST00000480923 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.93■■□□□ 1.1
VPS36-204ENST00000480923 LACTBL1A8MY62 500 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 WEE2P0C1S8 567 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 KCNA1Q09470 495 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 ALCAMQ13740 583 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 PDXDC1Q6P996 788 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 CD300LGQ6UXG3 332 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 TMC5Q6UXY8 1006 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 SYCP3Q8IZU3 236 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 PIK3R5Q8WYR1 880 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 POMGNT1Q8WZA1 660 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 RPGRIP1Q96KN7 1286 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms