RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 DERAQ9Y315 318 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 GRXCR1A8MXD5 290 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 GOLGA6L19H0YKK7 550 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 PTGESO14684 152 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 XPOTO43592 962 aaKnown RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 CDK11BP21127 795 aaKnown RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 TPM4P67936 248 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 HTRA4P83105 476 aaPredicted RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 TFAMQ00059 246 aaKnown RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 BFSP1Q12934 665 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 GRIK3Q13003 919 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 TMEM132DQ14C87 1099 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 DUOXA2Q1HG44 320 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 HSP90AA4PQ58FG1 418 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 NT5DC4Q86YG4 428 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 IRF2BP1Q8IU81 584 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 DHX40Q8IX18 779 aaKnown RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 LRRC43Q8N309 656 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 TMC2Q8TDI7 906 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 BORCS6Q96GS4 357 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 CNOT6LQ96LI5 555 aaKnown RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 TBC1D13Q9NVG8 400 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 C2CD2Q9Y426 696 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 MICAL3Q7RTP6 2002 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 NFICP08651 508 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 RABGGTBP53611 331 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 WNT7BP56706 349 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 DLG4P78352 724 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 ENPEPQ07075 957 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 NCAPHQ15003 741 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 IQCB1Q15051 598 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 ZBTB6Q15916 424 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 DCAF17Q5H9S7 520 aaPredicted RBP12.12□□□□□ -0.47
CLDN11-205ENST00000480067 SPOUT1Q5T280 376 aaKnown RBP12.12□□□□□ -0.47
CLDN11-205ENST00000480067 TCERG1LQ5VWI1 586 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 FAM109BQ6ICB4 259 aaPredicted RBP12.12□□□□□ -0.47
CLDN11-205ENST00000480067 LUZP1Q86V48 1076 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 WDR49Q8IV35 697 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 CMTR2Q8IYT2 770 aaKnown RBP12.12□□□□□ -0.47
CLDN11-205ENST00000480067 ANKRD20A12PQ8NF67 263 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 BEST2Q8NFU1 509 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 C18orf25Q96B23 403 aaPredicted RBP12.12□□□□□ -0.47
CLDN11-205ENST00000480067 PPP1R10Q96QC0 940 aaKnown RBP12.12□□□□□ -0.47
CLDN11-205ENST00000480067 PRO3102Q9H379 93 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 UBQLN1Q9UMX0 589 aaKnown RBP12.12□□□□□ -0.47
CLDN11-205ENST00000480067 PLAGL2Q9UPG8 496 aa12.12□□□□□ -0.47
CLDN11-205ENST00000480067 R3HCC1Q9Y3T6 440 aaKnown RBP12.12□□□□□ -0.47
CLDN11-205ENST00000480067 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.12□□□□□ -0.47
CLDN11-205ENST00000480067 KCNJ18B7U540 433 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 STX10O60499 249 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 TNNC2P02585 160 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 ALDH2P05091 517 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 TMEM191BP0C7N4 346 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 EEF1GP26641 437 aaKnown RBP12.11□□□□□ -0.47
CLDN11-205ENST00000480067 MTIF2P46199 727 aaKnown RBP12.11□□□□□ -0.47
CLDN11-205ENST00000480067 AP3M2P53677 418 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 MARSP56192 900 aaKnown RBP12.11□□□□□ -0.47
CLDN11-205ENST00000480067 CLDN10P78369 228 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 TUSC3Q13454 348 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 KCNJ12Q14500 433 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 TCP11X2Q5H9J9 407 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 PRPF38BQ5VTL8 546 aaKnown RBP12.11□□□□□ -0.47
CLDN11-205ENST00000480067 LMBRD2Q68DH5 695 aaPredicted RBP12.11□□□□□ -0.47
CLDN11-205ENST00000480067 ZNF280BQ86YH2 543 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 EFCAB13Q8IY85 973 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 FIBCD1Q8N539 461 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 PLEKHO2Q8TD55 490 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 ANKRD36BP1Q96IX9 119 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 CGRRF1Q99675 332 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 RC3H2Q9HBD1 1191 aaKnown RBP12.11□□□□□ -0.47
CLDN11-205ENST00000480067 INTS13Q9NVM9 706 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 DPP3Q9NY33 737 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 MSRAQ9UJ68 235 aa12.11□□□□□ -0.47
CLDN11-205ENST00000480067 COLQQ9Y215 455 aaPredicted RBP12.11□□□□□ -0.47
CLDN11-205ENST00000480067 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.11□□□□□ -0.47
CLDN11-205ENST00000480067 A0A1W2PPC1 479 aa12.1□□□□□ -0.47
CLDN11-205ENST00000480067 LRRIQ3A6PVS8 624 aaPredicted RBP12.1□□□□□ -0.47
CLDN11-205ENST00000480067 ZC3H11AO75152 810 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLDN11-205ENST00000480067 DDHD2O94830 711 aa12.1□□□□□ -0.47
CLDN11-205ENST00000480067 TPM2P07951 284 aa12.1□□□□□ -0.47
CLDN11-205ENST00000480067 TRIM49P0CI25 452 aa12.1□□□□□ -0.47
CLDN11-205ENST00000480067 TRIM49CP0CI26 452 aa12.1□□□□□ -0.47
CLDN11-205ENST00000480067 MYOGP15173 224 aa12.1□□□□□ -0.47
CLDN11-205ENST00000480067 CYP3A5P20815 502 aa12.1□□□□□ -0.47
CLDN11-205ENST00000480067 GTF2H1P32780 548 aa12.1□□□□□ -0.47
CLDN11-205ENST00000480067 ALDH7A1P49419 539 aaKnown RBP12.1□□□□□ -0.47
CLDN11-205ENST00000480067 CDKAL1Q5VV42 579 aa12.1□□□□□ -0.47
CLDN11-205ENST00000480067 TRIM59Q8IWR1 403 aa12.1□□□□□ -0.47
CLDN11-205ENST00000480067 RNF214Q8ND24 703 aa12.1□□□□□ -0.47
CLDN11-205ENST00000480067 OR5B17Q8NGF7 314 aa12.1□□□□□ -0.47
CLDN11-205ENST00000480067 DDX27Q96GQ7 796 aaKnown RBP12.1□□□□□ -0.47
CLDN11-205ENST00000480067 MTMR12Q9C0I1 747 aa12.1□□□□□ -0.47
CLDN11-205ENST00000480067 MMRN2Q9H8L6 949 aa12.1□□□□□ -0.47
CLDN11-205ENST00000480067 PCDHA11Q9Y5I1 949 aa12.1□□□□□ -0.47
CLDN11-205ENST00000480067 CHD9Q3L8U1 2897 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 CASTOR2A6NHX0 329 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 PHACTR2O75167 634 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 PRKCSHP14314 528 aaPredicted RBP12.09□□□□□ -0.47
CLDN11-205ENST00000480067 ZNF18P17022 549 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 RPL9P32969 192 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms