RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 PSMC1P62191 440 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 SF3B3Q15393 1217 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 EPHA10Q5JZY3 1008 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 STOX1Q6ZVD7 989 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 PASD1Q8IV76 773 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 GPD1LQ8N335 351 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 SENP7Q9BQF6 1050 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 ZC3H7BQ9UGR2 993 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 PCDHGB4Q9UN71 923 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 C15orf38-AP3S2A0A0A6YYH1 394 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 ANGPT2O15123 496 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 LTKP29376 864 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 HSD17B3P37058 310 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 RGS2P41220 211 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 ZNF135P52742 658 aaPredicted RBP6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 COPAP53621 1224 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 FMR1Q06787 632 aaKnown RBP eCLIP6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 TROAPQ12815 778 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 TMEM259Q4ZIN3 620 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 ARPINQ7Z6K5 226 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 KIAA0825Q8IV33 1275 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 COA7Q96BR5 231 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 MED10Q9BTT4 135 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 POLE3Q9NRF9 147 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 RIC8BQ9NVN3 520 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 NXF1Q9UBU9 619 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 OVOS2A0A0G2JMS6 1433 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 ATXN2Q99700 1313 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 AREL1O15033 823 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 RAD51CO43502 376 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 ARSEP51690 589 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 NAA20P61599 178 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 XIAPP98170 497 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 SF3A3Q12874 501 aaKnown RBP eCLIP6.47□□□□□ -1.375e-10■■■■□ 20.1
PRPF4B-205ENST00000480058 FBXW10Q5XX13 1052 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 DLGAP2Q9P1A6 1054 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 FEM1BQ9UK73 627 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 A0A087WWV3 80 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 C3orf70A6NLC5 250 aaPredicted RBP6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 PSTPIP1O43586 416 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 SYF2O95926 243 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 CRKLP46109 303 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 RAD23AP54725 363 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 LAMC2Q13753 1193 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 CCNG2Q16589 344 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 TKFCQ3LXA3 575 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 SMYD5Q6GMV2 418 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 TMEM270Q6UE05 265 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 BARGINQ6ZT62 677 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 NLRP9Q7RTR0 991 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 PPIL6Q8IXY8 311 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 TMC2Q8TDI7 906 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 EPAS1Q99814 870 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 RXFP1Q9HBX9 757 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 SMYD2Q9NRG4 433 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 SEPT9Q9UHD8 586 aaPredicted RBP6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 METP08581 1390 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 POTEMA6NI47 508 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 GLRA3O75311 464 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 PYGLP06737 847 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 PDHA1P08559 390 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 SCTRP47872 440 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 SEC24CP53992 1094 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 PEX3P56589 373 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 RAD51Q06609 339 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 CAPRIN1Q14444 709 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 MEA1Q16626 185 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 ZNF699Q32M78 642 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 SLC45A4Q5BKX6 768 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 SH2D3CQ8N5H7 860 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 TRIM63Q969Q1 353 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 ULK4Q96C45 1275 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 DACH2Q96NX9 599 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 SLC24A3Q9HC58 644 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 SLC8A2Q9UPR5 921 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 PHF20L1A8MW92 1017 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 PPP1R3GB7ZBB8 358 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 TIMM44O43615 452 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 XPAP23025 273 aaPredicted RBP6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 MMP14P50281 582 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 PPP4CP60510 307 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 PDK1Q15118 436 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 TTI2Q6NXR4 508 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 HORMAD1Q86X24 394 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 CROCCP3Q8IVE0 287 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 CCNYL1Q8N7R7 359 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 RNF25Q96BH1 459 aaPredicted RBP6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 CLMNQ96JQ2 1002 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 NRDE2Q9H7Z3 1164 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 IRAK4Q9NWZ3 460 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 SCN3BQ9NY72 215 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 MAP3K20Q9NYL2 800 aaKnown RBP6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 C15orf41Q9Y2V0 281 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 KAT6BQ8WYB5 2073 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 ZMYM2Q9UBW7 1377 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 FRMPD2Q68DX3 1309 aaPredicted RBP6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 WDR91A4D1P6 747 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 GNA15P30679 374 aa6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 HNRNPH3P31942 346 aaKnown RBP6.46□□□□□ -1.37
PRPF4B-205ENST00000480058 COILP38432 576 aaPredicted RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms