RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 PLCG1P19174 1290 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 TAC1P20366 129 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 LRRC63Q05C16 580 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 SULT2A1Q06520 285 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 STRN3Q13033 797 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 P3H1Q32P28 736 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 WDR72Q3MJ13 1102 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 RFWD3Q6PCD5 774 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 MARK2Q7KZI7 788 aaKnown RBP11.57□□□□□ -0.56
CHD6-208ENST00000480022 SPATA24Q86W54 205 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 NELFCDQ8IXH7 590 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 SMYD1Q8NB12 490 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 NAT14Q8WUY8 206 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 SNRNP27Q8WVK2 155 aaKnown RBP11.57□□□□□ -0.56
CHD6-208ENST00000480022 HES6Q96HZ4 224 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 CLMNQ96JQ2 1002 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHD6-208ENST00000480022 TUBGCP4Q9UGJ1 667 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 FZD1Q9UP38 647 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHD6-208ENST00000480022 PEX14O75381 377 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 PSMG1O95456 288 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 BRAFP15056 766 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 SHMT1P34896 483 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 AMPD3Q01432 767 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 MAPK7Q13164 816 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 SEC23AQ15436 765 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 MAMSTRQ6ZN01 415 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 LRRC55Q6ZSA7 311 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 WDR60Q8WVS4 1066 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 SLC35B4Q969S0 331 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 TUBGCP5Q96RT8 1024 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 UBA5Q9GZZ9 404 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 RNF41Q9H4P4 317 aaPredicted RBP11.57□□□□□ -0.56
CHD6-208ENST00000480022 PCDH18Q9HCL0 1135 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 NKIRAS1Q9NYS0 192 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 ZNF212Q9UDV6 495 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 ARMCX3Q9UH62 379 aaPredicted RBP11.57□□□□□ -0.56
CHD6-208ENST00000480022 AMFRQ9UKV5 643 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 STARD13Q9Y3M8 1113 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 BAZ2AQ9UIF9 1905 aaKnown RBP11.57□□□□□ -0.56
CHD6-208ENST00000480022 POTEFA5A3E0 1075 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 TBX10O75333 385 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 E2F6O75461 281 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 TOMM70O94826 608 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 VAV1P15498 845 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 GJA8P48165 433 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 HPCAP84074 193 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 CDR2Q01850 454 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 PRPF4BQ13523 1007 aaKnown RBP11.56□□□□□ -0.56
CHD6-208ENST00000480022 MPP2Q14168 576 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 CERKLQ49MI3 558 aaPredicted RBP11.56□□□□□ -0.56
CHD6-208ENST00000480022 KLC3Q6P597 504 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 POTEEQ6S8J3 1075 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 ADAT2Q7Z6V5 191 aaKnown RBP11.56□□□□□ -0.56
CHD6-208ENST00000480022 ZNF554Q86TJ5 538 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 ST13P4Q8IZP2 240 aaPredicted RBP11.56□□□□□ -0.56
CHD6-208ENST00000480022 CATSPER2Q96P56 530 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 STX18Q9P2W9 335 aaKnown RBP11.56□□□□□ -0.56
CHD6-208ENST00000480022 TBC1D30Q9Y2I9 924 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 DIS3Q9Y2L1 958 aaKnown RBP11.56□□□□□ -0.56
CHD6-208ENST00000480022 PFASO15067 1338 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 A0A0J9YVX5 310 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 HNRNPCL1O60812 293 aaKnown RBP11.56□□□□□ -0.56
CHD6-208ENST00000480022 PABPC4LP0CB38 370 aaKnown RBP11.56□□□□□ -0.56
CHD6-208ENST00000480022 NAT1P18440 290 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 COPB2P35606 906 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 RPL21P46778 160 aaKnown RBP11.56□□□□□ -0.56
CHD6-208ENST00000480022 PTK2Q05397 1052 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 ACSBG2Q5FVE4 666 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 SPDYAQ5MJ70 313 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 DAB2IPQ5VWQ8 1189 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 TATDN1Q6P1N9 297 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 DSTYKQ6XUX3 929 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 CATIPQ7Z7H3 387 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 CABP7Q86V35 215 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 STMN2Q93045 179 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 ARPC5LQ9BPX5 153 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 TSPYL2Q9H2G4 693 aaPredicted RBP11.56□□□□□ -0.56
CHD6-208ENST00000480022 MKNK2Q9HBH9 465 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 LNPEPQ9UIQ6 1025 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 NAGPAQ9UK23 515 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 SH3GLB1Q9Y371 365 aa11.56□□□□□ -0.56
CHD6-208ENST00000480022 DDX3XO00571 662 aaKnown RBP eCLIP11.55□□□□□ -0.56
CHD6-208ENST00000480022 PRKG1Q13976 671 aa11.55□□□□□ -0.56
CHD6-208ENST00000480022 RRP1BQ14684 758 aaKnown RBP11.55□□□□□ -0.56
CHD6-208ENST00000480022 DCAF15Q66K64 600 aa11.55□□□□□ -0.56
CHD6-208ENST00000480022 OLFML2BQ68BL8 750 aa11.55□□□□□ -0.56
CHD6-208ENST00000480022 ALKBH5Q6P6C2 394 aaKnown RBP11.55□□□□□ -0.56
CHD6-208ENST00000480022 KBTBD2Q8IY47 623 aa11.55□□□□□ -0.56
CHD6-208ENST00000480022 GUF1Q8N442 669 aaKnown RBP11.55□□□□□ -0.56
CHD6-208ENST00000480022 RBM46Q8TBY0 533 aaKnown RBP11.55□□□□□ -0.56
CHD6-208ENST00000480022 HAUS1Q96CS2 278 aa11.55□□□□□ -0.56
CHD6-208ENST00000480022 DYDC2Q96IM9 177 aa11.55□□□□□ -0.56
CHD6-208ENST00000480022 TSG101Q99816 390 aa11.55□□□□□ -0.56
CHD6-208ENST00000480022 SYNCQ9H7C4 482 aa11.55□□□□□ -0.56
CHD6-208ENST00000480022 ERVK-5Q9HDB9 667 aa11.55□□□□□ -0.56
CHD6-208ENST00000480022 KRT82Q9NSB4 513 aa11.55□□□□□ -0.56
CHD6-208ENST00000480022 SIPA1L1O43166 1804 aa11.55□□□□□ -0.56
CHD6-208ENST00000480022 A0A0A6YYK5 440 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms