RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 hCG_1984214I3L0E3 225 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 ACKR2O00590 384 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 RNASEH2AO75792 299 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 MED26O95402 600 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 TGFB1P01137 390 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 PRDX5P30044 214 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 MEF2AQ02078 507 aaPredicted RBP8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 G3BP1Q13283 466 aaKnown RBP eCLIP8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 PRKG1Q13976 671 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 INTS11Q5TA45 600 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 ETV3LQ6ZN32 361 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 AMIGO3Q86WK7 504 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 FAM90A1Q86YD7 464 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 GIMAP8Q8ND71 665 aaPredicted RBP8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 WDR48Q8TAF3 677 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 HEPHQ9BQS7 1158 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 TACO1Q9BSH4 297 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 C1orf43Q9BWL3 253 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 MRPL46Q9H2W6 279 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 WDCPQ9H6R7 721 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 CNNM1Q9NRU3 951 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 PIH1D1Q9NWS0 290 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 DACT1Q9NYF0 836 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 SLC5A6Q9Y289 635 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 MYBBP1AQ9BQG0 1328 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 TDRD9Q8NDG6 1382 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 CCDC88BA6NC98 1476 aa8.7□□□□□ -1.02
GAPVD1-217ENST00000479511 WNT10BO00744 389 aa8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 SNX2O60749 519 aa8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 HDCP19113 662 aa8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 SREBF1P36956 1147 aa8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 ARL4CP56559 192 aa8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 ATP8B2P98198 1209 aa8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 NR1I3Q14994 352 aa8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 C1orf122Q6ZSJ8 110 aa8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 PQLC1Q8N2U9 271 aa8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 MSL3Q8N5Y2 521 aaKnown RBP8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 BRIX1Q8TDN6 353 aaKnown RBP8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 NMD3Q96D46 503 aaKnown RBP8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 LTV1Q96GA3 475 aaPredicted RBP8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 SYT3Q9BQG1 590 aa8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 OSBPL6Q9BZF3 934 aa8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 SMURF2Q9HAU4 748 aa8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 GGA3Q9NZ52 723 aa8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 ARHGAP20Q9P2F6 1191 aa8.69□□□□□ -1.02
GAPVD1-217ENST00000479511 LOC100996750A0A140TA64 210 aa8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 F2RL2O00254 374 aa8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 H2AFB1P0C5Y9 115 aa8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 H2AFB2P0C5Z0 115 aa8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 GAAP10253 952 aa8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 SERPINF1P36955 418 aa8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 NKX3-2P78367 333 aa8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 RAB3GAP1Q15042 981 aa8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 PLEKHN1Q494U1 663 aaPredicted RBP8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 L1TD1Q5T7N2 865 aaKnown RBP8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 RSRC2Q7L4I2 434 aaKnown RBP8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 LILRA2Q8N149 483 aa8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 KBTBD7Q8WVZ9 684 aa8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 GDF15Q99988 308 aa8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 KRTAP4-6Q9BYQ5 205 aa8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 DPH1Q9BZG8 443 aa8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 MAN2B2Q9Y2E5 1009 aa8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 POLA1P09884 1462 aaPredicted RBP8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 SETD1BQ9UPS6 1966 aaKnown RBP8.68□□□□□ -1.02
GAPVD1-217ENST00000479511 AQP12BA6NM10 295 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 TRIM38O00635 465 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 MSTNO14793 375 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 PHF2O75151 1096 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 SOGA1O94964 1423 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 ADCY8P40145 1251 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 MAPKAPK2P49137 400 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 PER3P56645 1201 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 EXOSC9Q06265 439 aaKnown RBP8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 ADAM9Q13443 819 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 KCTD2Q14681 263 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 C19orf54Q5BKX5 351 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 GRAMD4Q6IC98 578 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 CD300LDQ6UXZ3 194 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 DCBLD1Q8N8Z6 715 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 ALG3Q92685 438 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 NKD2Q969F2 451 aaPredicted RBP8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 IQCDQ96DY2 449 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 SNX22Q96L94 193 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 DLL4Q9NR61 685 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 KLHL14Q9P2G3 628 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 IFT80Q9P2H3 777 aaPredicted RBP8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 SAE1Q9UBE0 346 aaPredicted RBP8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 ZFP69BQ9UJL9 534 aa8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.67□□□□□ -1.02
GAPVD1-217ENST00000479511 TRIM43BA6NCK2 446 aa8.66□□□□□ -1.02
GAPVD1-217ENST00000479511 TISP43B9A030 160 aa8.66□□□□□ -1.02
GAPVD1-217ENST00000479511 B9A039 149 aa8.66□□□□□ -1.02
GAPVD1-217ENST00000479511 H0Y858 1186 aa8.66□□□□□ -1.02
GAPVD1-217ENST00000479511 SYT5O00445 386 aa8.66□□□□□ -1.02
GAPVD1-217ENST00000479511 ADCY6O43306 1168 aa8.66□□□□□ -1.02
GAPVD1-217ENST00000479511 C8BP07358 591 aa8.66□□□□□ -1.02
GAPVD1-217ENST00000479511 HSP90AA1P07900 732 aaKnown RBP8.66□□□□□ -1.02
GAPVD1-217ENST00000479511 FTH1P19P0C7X4 201 aa8.66□□□□□ -1.02
GAPVD1-217ENST00000479511 DDCP20711 480 aa8.66□□□□□ -1.02
GAPVD1-217ENST00000479511 PCSK1P29120 753 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms